Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03149

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 3
3,508,719	+		MIT1002_03147	0.15	+0.4
3,508,863	-		MIT1002_03147	0.50	+0.7
3,508,903	-		MIT1002_03147	0.60	+1.7
3,509,019	-		MIT1002_03147	0.89	+1.0
3,509,204	-		MIT1002_03148	0.24	+0.1
3,509,228	+		MIT1002_03148	0.28	+0.5
3,509,228	+		MIT1002_03148	0.28	-1.0
3,509,250	-		MIT1002_03148	0.32	+1.3
3,509,271	+		MIT1002_03148	0.35	+0.5
3,509,391	+		MIT1002_03148	0.55	-0.3
3,509,409	-		MIT1002_03148	0.58	+1.6
3,509,455	+		MIT1002_03148	0.66	-0.6
3,509,467	+		MIT1002_03148	0.67	-2.4
3,509,491	+		MIT1002_03148	0.71	-1.5
3,509,586	+		MIT1002_03148	0.87	+2.7
3,509,621	+				-0.7
3,509,629	-				-2.1
3,509,656	+				+1.7
3,509,712	+				+1.1
3,509,733	+				-0.7
3,509,812	-				+1.4
3,509,812	-				+2.2
3,509,921	-		MIT1002_03149	0.17	-0.1
3,509,940	+		MIT1002_03149	0.18	-2.1
3,509,949	-		MIT1002_03149	0.19	-0.2
3,509,987	+		MIT1002_03149	0.22	-0.3
3,509,995	-		MIT1002_03149	0.22	+1.9
3,510,008	+		MIT1002_03149	0.23	-0.6
3,510,013	+		MIT1002_03149	0.23	+1.5
3,510,023	-		MIT1002_03149	0.24	-0.4
3,510,124	+		MIT1002_03149	0.32	-0.6
3,510,138	+		MIT1002_03149	0.33	-2.3
3,510,162	-		MIT1002_03149	0.34	+0.5
3,510,198	-		MIT1002_03149	0.37	+0.6
3,510,198	-		MIT1002_03149	0.37	-0.1
3,510,240	+		MIT1002_03149	0.40	-1.0
3,510,265	+		MIT1002_03149	0.42	+0.5
3,510,265	-		MIT1002_03149	0.42	+0.7
3,510,272	+		MIT1002_03149	0.43	-2.4
3,510,358	+		MIT1002_03149	0.49	+1.3
3,510,477	-		MIT1002_03149	0.58	+0.1
3,510,534	-		MIT1002_03149	0.62	+0.8
3,510,534	-		MIT1002_03149	0.62	-0.0
3,510,568	+		MIT1002_03149	0.64	+0.8
3,510,600	-		MIT1002_03149	0.67	-3.1
3,510,604	-		MIT1002_03149	0.67	+1.5
3,510,661	-		MIT1002_03149	0.71	-4.8
3,510,700	-		MIT1002_03149	0.74	-0.7
3,510,756	+		MIT1002_03149	0.78	+0.3
3,510,831	-		MIT1002_03149	0.84	+0.8
3,510,848	+		MIT1002_03149	0.85	-2.0
3,510,871	-		MIT1002_03149	0.87	-3.1
3,510,884	-		MIT1002_03149	0.88	-2.6
3,510,977	-				+2.0
3,510,986	-				+1.0
3,511,018	+				+0.1
3,511,018	+				-0.2
3,511,026	-				+0.6
3,511,084	-				+0.2
3,511,205	+		MIT1002_03150	0.16	+0.5
3,511,448	-		MIT1002_03150	0.84	+0.1
3,511,448	-		MIT1002_03150	0.84	+0.9