Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03113

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 3
3,466,122	-		MIT1002_03111	0.28	-0.3
3,466,185	-		MIT1002_03111	0.36	+0.9
3,466,276	+		MIT1002_03111	0.48	+2.1
3,466,290	+		MIT1002_03111	0.50	-0.5
3,466,366	+		MIT1002_03111	0.60	-0.7
3,466,379	-		MIT1002_03111	0.62	-2.1
3,466,455	+		MIT1002_03111	0.72	-1.6
3,466,455	+		MIT1002_03111	0.72	-1.0
3,466,455	+		MIT1002_03111	0.72	+0.8
3,466,463	-		MIT1002_03111	0.73	+0.1
3,466,483	+		MIT1002_03111	0.75	-1.7
3,466,563	+		MIT1002_03111	0.86	-0.2
3,466,703	+				-0.0
3,466,721	-				-0.0
3,466,746	+				+2.9
3,466,749	-				+0.2
3,466,754	-				+0.1
3,466,754	-				-0.5
3,466,754	-				-0.6
3,466,758	+				-0.3
3,466,764	-				-0.6
3,466,766	-				+0.8
3,466,790	-		MIT1002_03112	0.12	+1.4
3,466,802	+		MIT1002_03112	0.17	+0.8
3,466,810	-		MIT1002_03112	0.20	+0.6
3,466,876	+		MIT1002_03112	0.43	-1.8
3,466,877	-		MIT1002_03112	0.44	-3.5
3,466,916	+		MIT1002_03112	0.58	-0.3
3,466,924	-		MIT1002_03112	0.61	+0.8
3,466,926	+		MIT1002_03112	0.62	-1.0
3,466,943	+		MIT1002_03112	0.68	-2.5
3,466,944	-		MIT1002_03112	0.68	+0.8
3,466,949	-		MIT1002_03112	0.70	+1.2
3,467,028	+				-3.0
3,467,035	+				+0.3
3,467,035	+				-3.8
3,467,036	-				+1.2
3,467,077	+				-2.3
3,467,077	+				+0.8
3,467,077	+				-0.4
3,467,225	-		MIT1002_03113	0.13	-0.5
3,467,245	-		MIT1002_03113	0.15	-0.2
3,467,250	+		MIT1002_03113	0.16	+1.1
3,467,286	-		MIT1002_03113	0.20	-1.9
3,467,429	+		MIT1002_03113	0.37	-0.9
3,467,487	+		MIT1002_03113	0.44	-1.5
3,467,496	-		MIT1002_03113	0.45	+0.6
3,467,594	-		MIT1002_03113	0.57	-0.2
3,467,608	+		MIT1002_03113	0.59	-0.4
3,467,630	+		MIT1002_03113	0.61	-0.5
3,467,638	-		MIT1002_03113	0.62	-1.2
3,467,682	+		MIT1002_03113	0.67	-4.2
3,467,714	+		MIT1002_03113	0.71	+1.3
3,467,755	-		MIT1002_03113	0.76	+0.3
3,467,755	-		MIT1002_03113	0.76	+1.3
3,467,938	-				+1.3
3,467,959	-				+1.8
3,468,022	-				-3.9
3,468,059	-				+2.2
3,468,059	-				-3.1
3,468,059	-				-2.1
3,468,103	+				-0.8
3,468,245	-				-0.2
3,468,248	+				-1.4
3,468,302	+		MIT1002_03114	0.10	-0.2
3,468,312	-		MIT1002_03114	0.11	-0.6
3,468,342	+		MIT1002_03114	0.12	-0.7
3,468,858	+		MIT1002_03114	0.38	-0.2
3,468,930	+		MIT1002_03114	0.42	-1.0
3,468,938	-		MIT1002_03114	0.42	-1.2