Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03053

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 3
3,406,721	-				+1.2
3,406,731	-				-2.5
3,406,752	-		MIT1002_03052	0.12	-0.6
3,406,896	+		MIT1002_03052	0.30	+0.6
3,406,896	+		MIT1002_03052	0.30	-0.0
3,406,896	+		MIT1002_03052	0.30	+0.8
3,406,896	+		MIT1002_03052	0.30	-3.2
3,406,904	+		MIT1002_03052	0.31	+0.4
3,406,904	-		MIT1002_03052	0.31	-1.3
3,406,911	-		MIT1002_03052	0.32	+0.1
3,406,977	+		MIT1002_03052	0.40	+0.6
3,406,979	+		MIT1002_03052	0.40	-0.3
3,406,985	-		MIT1002_03052	0.41	+0.1
3,406,987	-		MIT1002_03052	0.41	-4.0
3,406,989	+		MIT1002_03052	0.42	-3.4
3,407,031	-		MIT1002_03052	0.47	-0.8
3,407,044	+		MIT1002_03052	0.48	-0.9
3,407,057	-		MIT1002_03052	0.50	-0.5
3,407,163	-		MIT1002_03052	0.63	-1.2
3,407,183	+		MIT1002_03052	0.66	-2.3
3,407,185	+		MIT1002_03052	0.66	-2.4
3,407,185	+		MIT1002_03052	0.66	+0.3
3,407,185	-		MIT1002_03052	0.66	-0.3
3,407,273	-		MIT1002_03052	0.77	-0.7
3,407,273	-		MIT1002_03052	0.77	+1.1
3,407,276	+		MIT1002_03052	0.78	+0.8
3,407,288	+		MIT1002_03052	0.79	-2.9
3,407,307	+		MIT1002_03052	0.81	+0.1
3,407,365	+		MIT1002_03052	0.89	+1.7
3,407,365	+		MIT1002_03052	0.89	+0.5
3,407,418	+				+1.2
3,407,424	+				-0.6
3,407,426	-				+0.9
3,407,543	-				-1.9
3,407,620	-				-0.0
3,407,659	-				-0.0
3,408,510	+				-1.4
3,408,518	-				-0.1
3,408,520	+				-0.2
3,408,683	-				-1.8
3,408,691	+				-0.8
3,408,715	+				+0.1
3,408,794	+				+2.1
3,408,817	-				-0.4
3,408,828	+				-1.5
3,408,828	+				-4.0
3,408,828	+				+1.6
3,408,836	-				-1.2
3,408,839	-				-2.6
3,408,967	+				+0.0
3,408,972	-				-3.8
3,409,126	+				+0.1
3,409,126	-				+0.4
3,409,131	+				+0.7
3,409,155	-				+0.9
3,409,239	+				-0.7
3,409,280	+				+1.6
3,409,291	-				-1.3
3,409,324	+				+2.9
3,409,422	+				-1.6
3,409,430	-		MIT1002_03054	0.11	+2.3
3,409,430	-		MIT1002_03054	0.11	-1.0