Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02603

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 3
2,903,044	-				-0.6
2,903,089	+				-0.1
2,903,202	+				-1.6
2,903,210	-				-0.2
2,903,210	-				+0.7
2,903,210	-				-1.9
2,903,210	-				+1.5
2,903,210	-				+1.3
2,903,210	-				-3.3
2,903,210	-				+2.5
2,903,210	-				-0.9
2,903,215	-				+0.1
2,903,299	+		MIT1002_02603	0.14	+0.8
2,903,328	-		MIT1002_02603	0.18	+0.0
2,903,359	+		MIT1002_02603	0.22	-0.1
2,903,444	-		MIT1002_02603	0.34	+1.1
2,903,449	+		MIT1002_02603	0.34	+0.4
2,903,467	-		MIT1002_02603	0.37	+2.3
2,903,602	-		MIT1002_02603	0.55	-0.3
2,903,618	-		MIT1002_02603	0.57	+1.8
2,903,647	+		MIT1002_02603	0.61	+0.0
2,903,702	+		MIT1002_02603	0.68	+0.3
2,903,702	+		MIT1002_02603	0.68	-1.2
2,903,702	+		MIT1002_02603	0.68	+1.2
2,903,702	+		MIT1002_02603	0.68	+2.5
2,903,702	+		MIT1002_02603	0.68	-2.6
2,903,702	+		MIT1002_02603	0.68	+0.9
2,903,710	-		MIT1002_02603	0.69	-2.0
2,903,710	-		MIT1002_02603	0.69	+0.2
2,903,710	-		MIT1002_02603	0.69	+0.6
2,903,710	-		MIT1002_02603	0.69	+0.8
2,903,710	-		MIT1002_02603	0.69	-0.4
2,903,710	-		MIT1002_02603	0.69	-0.6
2,903,715	-		MIT1002_02603	0.70	+0.1
2,903,720	-		MIT1002_02603	0.70	+0.4
2,903,730	-		MIT1002_02603	0.72	+1.7
2,903,730	-		MIT1002_02603	0.72	+0.1
2,903,730	-		MIT1002_02603	0.72	-0.9
2,903,730	-		MIT1002_02603	0.72	-0.0
2,903,768	+		MIT1002_02603	0.77	+0.1
2,903,789	-		MIT1002_02603	0.79	-0.2
2,903,871	-				+0.2
2,903,874	+				+1.4
2,903,874	+				+0.2
2,903,987	+				+2.4
2,904,128	-				+0.5
2,904,150	-				+2.4
2,904,214	-		MIT1002_02604	0.15	-0.9
2,904,257	-		MIT1002_02604	0.20	+1.2
2,904,407	+		MIT1002_02604	0.36	+0.7
2,904,417	+		MIT1002_02604	0.38	-2.0
2,904,425	-		MIT1002_02604	0.38	+1.7
2,904,586	+		MIT1002_02604	0.56	-0.0
2,904,594	-		MIT1002_02604	0.57	+0.9
2,904,613	+		MIT1002_02604	0.59	+0.1
2,904,615	-		MIT1002_02604	0.59	+0.8
2,904,621	+		MIT1002_02604	0.60	+1.4
2,904,621	+		MIT1002_02604	0.60	+1.2
2,904,627	-		MIT1002_02604	0.61	-2.2
2,904,629	-		MIT1002_02604	0.61	-0.6
2,904,680	-		MIT1002_02604	0.67	-3.7
2,904,680	-		MIT1002_02604	0.67	-0.7
2,904,732	-		MIT1002_02604	0.72	-3.0
2,904,783	+		MIT1002_02604	0.78	+0.2
2,904,798	+		MIT1002_02604	0.80	+0.8
2,904,801	-		MIT1002_02604	0.80	+0.6
2,904,801	-		MIT1002_02604	0.80	-1.5
2,904,806	-		MIT1002_02604	0.80	-2.0
2,904,831	-		MIT1002_02604	0.83	+1.2
2,904,871	-		MIT1002_02604	0.88	-1.9
2,904,939	+				+0.9