Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01814

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 3
2,020,873	+				-0.9
2,020,873	+				-2.8
2,020,873	+				-0.8
2,020,881	-				-0.5
2,020,881	-				-3.5
2,020,881	-				-2.2
2,020,893	+				+1.0
2,020,901	-				+0.8
2,020,901	-				-0.1
2,020,919	+				-3.4
2,020,927	-				-2.2
2,020,937	+				+1.4
2,020,954	+				-1.4
2,020,973	-				-2.9
2,021,150	+		MIT1002_01813	0.16	-1.8
2,021,196	+		MIT1002_01813	0.26	+0.7
2,021,196	+		MIT1002_01813	0.26	-3.7
2,021,196	+		MIT1002_01813	0.26	+0.8
2,021,214	-		MIT1002_01813	0.30	+0.6
2,021,290	+		MIT1002_01813	0.46	-3.6
2,021,317	+		MIT1002_01813	0.52	+2.0
2,021,387	-		MIT1002_01813	0.67	+0.1
2,021,387	-		MIT1002_01813	0.67	+1.0
2,021,387	-		MIT1002_01813	0.67	-1.1
2,021,387	-		MIT1002_01813	0.67	-3.6
2,021,442	+		MIT1002_01813	0.79	-1.9
2,021,537	+				-1.5
2,021,712	+				+3.9
2,021,815	-				+0.2
2,021,849	+				-0.4
2,021,857	-				+1.9
2,021,857	-				-0.6
2,021,857	-				+0.2
2,021,897	+		MIT1002_01814	0.15	-3.8
2,021,944	-		MIT1002_01814	0.21	+1.2
2,022,023	+		MIT1002_01814	0.31	+0.8
2,022,024	-		MIT1002_01814	0.31	-1.8
2,022,083	+		MIT1002_01814	0.39	-2.1
2,022,097	+		MIT1002_01814	0.41	-0.0
2,022,107	+		MIT1002_01814	0.42	+1.1
2,022,142	-		MIT1002_01814	0.47	-1.3
2,022,145	+		MIT1002_01814	0.47	+2.7
2,022,246	-		MIT1002_01814	0.60	+2.1
2,022,362	-		MIT1002_01814	0.75	-2.9
2,022,477	+		MIT1002_01814	0.90	-1.1
2,022,514	+				+0.2
2,022,522	-				+1.8
2,022,571	+				-0.0
2,022,613	+				+0.0
2,022,623	+				-1.5
2,022,649	+				-3.5
2,022,651	+				+1.3
2,022,674	+				-1.6
2,022,681	+				-0.9
2,022,682	-				+1.4
2,022,682	-				+3.2
2,022,709	-				+0.1
2,022,776	-				+0.0
2,022,783	+				-1.8
2,022,784	+				-2.3
2,022,878	+		MIT1002_01815	0.13	-2.6
2,022,903	-		MIT1002_01815	0.16	-2.4
2,022,903	-		MIT1002_01815	0.16	-2.2
2,022,971	-		MIT1002_01815	0.25	-1.7
2,023,010	+		MIT1002_01815	0.30	-3.5
2,023,010	+		MIT1002_01815	0.30	-1.7
2,023,010	+		MIT1002_01815	0.30	-4.3
2,023,010	+		MIT1002_01815	0.30	-1.3
2,023,015	+		MIT1002_01815	0.30	-0.9
2,023,018	-		MIT1002_01815	0.31	-4.2
2,023,018	-		MIT1002_01815	0.31	-0.7
2,023,027	+		MIT1002_01815	0.32	+0.2
2,023,062	+		MIT1002_01815	0.36	-0.9
2,023,062	+		MIT1002_01815	0.36	-0.6
2,023,130	+		MIT1002_01815	0.44	-3.3
2,023,196	-		MIT1002_01815	0.52	-2.0
2,023,534	+				-0.9
2,023,542	-				-0.6
2,023,542	-				+0.8
2,023,550	-				-1.1