Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01643

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 3
1,813,589	+		MIT1002_01642	0.63	-2.6
1,813,597	-		MIT1002_01642	0.64	+1.3
1,813,629	+		MIT1002_01642	0.65	+0.7
1,813,629	+		MIT1002_01642	0.65	-0.2
1,813,637	+		MIT1002_01642	0.65	-1.2
1,813,637	+		MIT1002_01642	0.65	+1.5
1,813,637	-		MIT1002_01642	0.65	-0.1
1,813,639	+		MIT1002_01642	0.66	+0.5
1,813,645	-		MIT1002_01642	0.66	+0.2
1,813,647	-		MIT1002_01642	0.66	+1.3
1,813,654	+		MIT1002_01642	0.66	+1.1
1,813,684	+		MIT1002_01642	0.67	+0.3
1,813,692	-		MIT1002_01642	0.68	+1.8
1,813,735	+		MIT1002_01642	0.70	-1.1
1,813,737	+		MIT1002_01642	0.70	-0.5
1,813,737	+		MIT1002_01642	0.70	+1.8
1,813,739	+		MIT1002_01642	0.70	-2.3
1,813,745	-		MIT1002_01642	0.70	-1.2
1,813,762	-		MIT1002_01642	0.71	+0.0
1,813,863	-		MIT1002_01642	0.75	+0.6
1,813,866	-		MIT1002_01642	0.75	-0.1
1,813,866	-		MIT1002_01642	0.75	-1.5
1,813,877	+		MIT1002_01642	0.75	+1.0
1,813,877	+		MIT1002_01642	0.75	-1.5
1,813,885	-		MIT1002_01642	0.76	-1.9
1,814,063	+		MIT1002_01642	0.83	+0.3
1,814,201	+		MIT1002_01642	0.89	+0.3
1,814,317	+				-0.6
1,814,318	-				-0.5
1,814,378	+				+0.6
1,814,401	+				+1.8
1,814,409	-				-1.9
1,814,433	+				-0.9
1,814,643	-				-1.7
1,814,675	+		MIT1002_01643	0.12	+1.8
1,814,694	+		MIT1002_01643	0.14	+0.2
1,814,695	+		MIT1002_01643	0.14	-0.0
1,814,695	-		MIT1002_01643	0.14	-2.4
1,814,738	+		MIT1002_01643	0.18	-0.4
1,814,812	+		MIT1002_01643	0.25	-0.4
1,814,988	-		MIT1002_01643	0.43	+1.0
1,815,044	+		MIT1002_01643	0.48	+1.1
1,815,054	+		MIT1002_01643	0.49	+2.2
1,815,067	-		MIT1002_01643	0.50	+0.2
1,815,089	-		MIT1002_01643	0.52	+0.8
1,815,127	+		MIT1002_01643	0.56	+1.1
1,815,127	+		MIT1002_01643	0.56	-2.3
1,815,275	-		MIT1002_01643	0.71	+0.7
1,815,324	-		MIT1002_01643	0.75	+2.4
1,815,332	+		MIT1002_01643	0.76	-0.5
1,815,355	-		MIT1002_01643	0.78	-0.6
1,815,365	-		MIT1002_01643	0.79	-3.8
1,815,406	+		MIT1002_01643	0.83	-3.8
1,815,412	+		MIT1002_01643	0.84	+0.4
1,815,419	-		MIT1002_01643	0.85	+0.1
1,815,427	+		MIT1002_01643	0.85	+0.9
1,815,442	+		MIT1002_01643	0.87	-2.5
1,815,442	+		MIT1002_01643	0.87	+1.7
1,815,450	-		MIT1002_01643	0.88	+2.1
1,815,541	+				-0.3
1,815,671	+				-3.1
1,815,717	+		MIT1002_01644	0.18	-2.9
1,815,725	-		MIT1002_01644	0.20	-1.2
1,815,735	-		MIT1002_01644	0.22	+0.8
1,815,867	+		MIT1002_01644	0.47	-4.8
1,815,875	-		MIT1002_01644	0.49	-3.6
1,815,896	+		MIT1002_01644	0.53	-0.2
1,815,906	+		MIT1002_01644	0.55	-0.4
1,815,914	-		MIT1002_01644	0.57	+0.8
1,816,042	+		MIT1002_01644	0.81	-0.0
1,816,050	-		MIT1002_01644	0.83	-0.5
1,816,050	-		MIT1002_01644	0.83	-0.2
1,816,100	+				+1.9
1,816,116	-				+0.2
1,816,211	-				-3.5
1,816,231	+				-1.2
1,816,266	+				-1.2
1,816,307	+				-1.9
1,816,315	-				-0.3
1,816,368	+				+1.5
1,816,371	-				-2.2
1,816,562	+		MIT1002_01645	0.20	-2.3