Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01584

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 3
1,741,833	+		MIT1002_01582	0.57	-0.1
1,741,895	+		MIT1002_01582	0.74	-0.3
1,741,949	+		MIT1002_01582	0.89	+0.2
1,741,956	+				-0.8
1,741,973	+				-3.4
1,741,973	+				+2.6
1,741,973	+				+0.0
1,741,983	+				+0.8
1,741,983	+				-3.9
1,741,991	+				+0.6
1,741,991	-				+2.4
1,741,991	-				-2.0
1,742,008	+				-2.9
1,742,203	-				-0.6
1,742,249	-		MIT1002_01583	0.19	-2.3
1,742,259	-		MIT1002_01583	0.22	-3.9
1,742,322	-		MIT1002_01583	0.38	+0.4
1,742,328	-		MIT1002_01583	0.39	+0.2
1,742,333	+		MIT1002_01583	0.40	-1.4
1,742,333	+		MIT1002_01583	0.40	-1.2
1,742,337	-		MIT1002_01583	0.41	+1.7
1,742,337	-		MIT1002_01583	0.41	-1.7
1,742,341	-		MIT1002_01583	0.42	+0.3
1,742,344	+		MIT1002_01583	0.43	-1.2
1,742,389	+		MIT1002_01583	0.55	-0.6
1,742,389	+		MIT1002_01583	0.55	-0.5
1,742,397	-		MIT1002_01583	0.57	-0.3
1,742,397	-		MIT1002_01583	0.57	-0.4
1,742,436	-		MIT1002_01583	0.67	-0.5
1,742,436	-		MIT1002_01583	0.67	-0.5
1,742,455	+		MIT1002_01583	0.72	+0.7
1,742,455	+		MIT1002_01583	0.72	+0.1
1,742,455	+		MIT1002_01583	0.72	+0.0
1,742,455	+		MIT1002_01583	0.72	-0.7
1,742,463	-		MIT1002_01583	0.74	-3.1
1,742,478	-		MIT1002_01583	0.77	+0.7
1,742,487	+		MIT1002_01583	0.80	-1.5
1,742,487	+		MIT1002_01583	0.80	+0.2
1,742,488	-		MIT1002_01583	0.80	-3.6
1,742,500	+		MIT1002_01583	0.83	-0.2
1,742,510	+		MIT1002_01583	0.85	+0.6
1,742,596	+				-1.8
1,742,597	-				-1.7
1,742,599	-				-1.5
1,742,703	+				-2.6
1,742,712	-				+1.5
1,742,756	-				-0.6
1,742,825	+				-0.0
1,742,845	-				+0.8
1,742,845	-				-0.6
1,742,845	-				-1.2
1,742,872	+				-3.1
1,742,872	+				-1.5
1,742,872	+				-0.3
1,742,872	+				-1.8
1,742,880	-				-0.4
1,742,880	-				-1.3
1,742,882	+				-1.6
1,742,882	+				-0.6
1,742,890	-				-0.5
1,742,904	+		MIT1002_01584	0.11	-1.1
1,742,904	+		MIT1002_01584	0.11	-1.9
1,742,912	-		MIT1002_01584	0.12	-3.2
1,742,914	+		MIT1002_01584	0.12	+1.5
1,742,947	-		MIT1002_01584	0.15	-0.1
1,742,973	-		MIT1002_01584	0.18	-2.8
1,742,975	+		MIT1002_01584	0.18	+2.7
1,742,979	-		MIT1002_01584	0.19	-1.0
1,743,027	+		MIT1002_01584	0.24	-0.3
1,743,027	+		MIT1002_01584	0.24	-4.5
1,743,027	+		MIT1002_01584	0.24	+1.6
1,743,035	-		MIT1002_01584	0.25	+0.9
1,743,181	-		MIT1002_01584	0.41	-0.3
1,743,311	+		MIT1002_01584	0.55	-0.2
1,743,395	-		MIT1002_01584	0.64	-1.5
1,743,420	+		MIT1002_01584	0.67	-1.2
1,743,483	+		MIT1002_01584	0.74	+0.7
1,743,491	+		MIT1002_01584	0.74	+0.1
1,743,499	-		MIT1002_01584	0.75	-0.8
1,743,499	-		MIT1002_01584	0.75	+0.1
1,743,577	-		MIT1002_01584	0.84	+0.2
1,743,609	-		MIT1002_01584	0.87	-0.2
1,743,644	-				+1.9
1,743,719	+				-0.1
1,743,811	-				-0.3
1,743,935	+				-0.2
1,743,943	-				-4.2
1,743,945	+				-0.7
1,743,955	+				+0.1
1,743,963	-				-0.1
1,743,970	+				-1.6
1,744,010	-				-0.0
1,744,045	-				+0.7
1,744,101	+		MIT1002_01585	0.11	+1.5
1,744,101	+		MIT1002_01585	0.11	-0.5
1,744,102	-		MIT1002_01585	0.11	-0.0
1,744,109	-		MIT1002_01585	0.11	-0.5
1,744,127	-		MIT1002_01585	0.12	+0.4
1,744,136	+		MIT1002_01585	0.13	+0.4
1,744,136	+		MIT1002_01585	0.13	-2.0
1,744,144	-		MIT1002_01585	0.13	-0.3
1,744,144	-		MIT1002_01585	0.13	+1.1
1,744,144	-		MIT1002_01585	0.13	+2.0
1,744,180	+		MIT1002_01585	0.15	+1.4
1,744,355	-		MIT1002_01585	0.23	+1.1
1,744,386	-		MIT1002_01585	0.25	+2.2
1,744,396	-		MIT1002_01585	0.25	+0.6
1,744,425	-		MIT1002_01585	0.27	+0.2
1,744,469	-		MIT1002_01585	0.29	-4.3
1,744,559	+		MIT1002_01585	0.34	-3.2
1,744,564	+		MIT1002_01585	0.34	-0.9
1,744,567	-		MIT1002_01585	0.34	-3.2
1,744,571	+		MIT1002_01585	0.34	-2.3
1,744,582	-		MIT1002_01585	0.35	-3.9
1,744,585	+		MIT1002_01585	0.35	+0.6
1,744,601	+		MIT1002_01585	0.36	+0.4
1,744,641	+		MIT1002_01585	0.38	-3.2
1,744,720	+		MIT1002_01585	0.42	-0.5