Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01495

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 3
1,652,609	+		MIT1002_01494	0.52	-1.4
1,652,702	+		MIT1002_01494	0.58	+0.4
1,652,702	+		MIT1002_01494	0.58	-3.0
1,652,710	-		MIT1002_01494	0.59	-3.0
1,652,710	-		MIT1002_01494	0.59	-1.7
1,652,740	-		MIT1002_01494	0.61	-0.8
1,652,789	+		MIT1002_01494	0.65	+1.9
1,652,789	+		MIT1002_01494	0.65	-3.7
1,652,797	-		MIT1002_01494	0.65	+1.1
1,652,797	-		MIT1002_01494	0.65	-1.8
1,652,821	-		MIT1002_01494	0.67	-2.2
1,652,906	-		MIT1002_01494	0.73	-0.0
1,652,940	+		MIT1002_01494	0.75	+0.9
1,652,960	+		MIT1002_01494	0.77	+0.9
1,652,966	+		MIT1002_01494	0.77	-0.6
1,653,030	-		MIT1002_01494	0.82	+1.1
1,653,066	-		MIT1002_01494	0.84	-0.1
1,653,113	-		MIT1002_01494	0.88	-0.4
1,653,129	-		MIT1002_01494	0.89	-3.1
1,653,136	+		MIT1002_01494	0.89	-1.7
1,653,170	-				-1.9
1,653,184	+				+0.0
1,653,190	+				+1.1
1,653,192	-				-0.0
1,653,198	-				+1.2
1,653,198	-				-2.2
1,653,215	-				+0.2
1,653,215	-				-1.0
1,653,229	+				+0.7
1,653,232	-				+1.3
1,653,334	+				+2.0
1,653,347	-				+0.3
1,653,347	-				-0.3
1,653,347	-				+0.7
1,653,347	-				-0.3
1,653,350	-				-2.3
1,653,532	+				-0.5
1,653,709	-		MIT1002_01496	0.27	-3.9
1,653,787	-				+1.6
1,653,856	+		MIT1002_01497	0.66	+0.8