Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01463

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 3
1,616,025	+		MIT1002_01462	0.71	-2.6
1,616,066	-		MIT1002_01462	0.73	+2.5
1,616,089	+		MIT1002_01462	0.74	-2.0
1,616,107	+		MIT1002_01462	0.74	+1.6
1,616,121	+		MIT1002_01462	0.75	-1.0
1,616,131	+		MIT1002_01462	0.75	+0.3
1,616,139	-		MIT1002_01462	0.76	+0.0
1,616,211	-		MIT1002_01462	0.78	-0.9
1,616,235	-		MIT1002_01462	0.79	+0.8
1,616,265	+		MIT1002_01462	0.81	-0.3
1,616,275	+		MIT1002_01462	0.81	-1.5
1,616,278	-		MIT1002_01462	0.81	+1.0
1,616,369	+		MIT1002_01462	0.85	-3.4
1,616,394	-		MIT1002_01462	0.86	-0.3
1,616,438	-		MIT1002_01462	0.87	+0.1
1,616,602	-				+0.0
1,616,671	-				-2.4
1,616,689	-				+1.3
1,616,713	+				+1.0
1,616,716	-				+1.5
1,616,721	-				-2.0
1,616,776	-				+0.8
1,616,778	+				-1.9
1,616,786	-				+1.3
1,616,887	+				-3.4
1,616,920	+				+0.6
1,616,933	+				-2.3
1,616,943	+				+0.5
1,616,946	-				+1.5
1,616,951	-				+1.4
1,616,988	+				+1.5
1,616,996	-				-2.1
1,616,996	-				+0.6
1,617,092	+				+0.3
1,617,092	+				-1.3
1,617,092	+				+0.3
1,617,092	+				+1.1
1,617,092	+				-0.5
1,617,099	-				+0.9
1,617,100	-				-0.2
1,617,100	-				+0.5
1,617,100	-				+0.1
1,617,100	-				+1.1
1,617,100	-				+0.8
1,617,100	-				-0.9
1,617,100	-				+1.0
1,617,115	-				-0.1
1,617,121	+				-3.3
1,617,225	+		MIT1002_01463	0.14	+0.1
1,617,279	+		MIT1002_01463	0.17	+1.7
1,617,350	+		MIT1002_01463	0.21	+1.5
1,617,365	-		MIT1002_01463	0.21	+0.6
1,617,375	-		MIT1002_01463	0.22	+1.4
1,617,444	+		MIT1002_01463	0.26	+2.4
1,617,533	-		MIT1002_01463	0.30	+0.2
1,617,563	-		MIT1002_01463	0.32	+1.7
1,617,740	-		MIT1002_01463	0.41	+1.1
1,617,853	-		MIT1002_01463	0.47	+1.5
1,617,859	+		MIT1002_01463	0.47	-0.1
1,617,869	+		MIT1002_01463	0.48	-4.8
1,617,869	+		MIT1002_01463	0.48	-1.3
1,617,869	+		MIT1002_01463	0.48	-1.2
1,617,907	-		MIT1002_01463	0.50	+0.7
1,617,924	-		MIT1002_01463	0.51	+0.4
1,617,936	-		MIT1002_01463	0.51	+1.7
1,618,083	-		MIT1002_01463	0.59	+0.8
1,618,107	+		MIT1002_01463	0.60	+0.3
1,618,173	-		MIT1002_01463	0.64	+0.5
1,618,173	-		MIT1002_01463	0.64	-3.1
1,618,195	+		MIT1002_01463	0.65	-0.0
1,618,205	+		MIT1002_01463	0.65	+1.1
1,618,307	-		MIT1002_01463	0.71	+1.8
1,618,381	-		MIT1002_01463	0.75	+2.8
1,618,381	-		MIT1002_01463	0.75	+1.6
1,618,382	-		MIT1002_01463	0.75	-1.2
1,618,514	-		MIT1002_01463	0.82	-2.1
1,618,528	+		MIT1002_01463	0.82	+0.7
1,618,701	+				-2.2
1,618,772	+				+3.1
1,618,806	-				-2.1
1,618,840	-				+1.3
1,618,855	-				-3.2
1,618,855	-				-0.0
1,619,012	-		MIT1002_01464	0.22	-0.1
1,619,045	-		MIT1002_01464	0.27	+2.2
1,619,104	-		MIT1002_01464	0.35	+0.5
1,619,127	-		MIT1002_01464	0.39	-1.9
1,619,127	-		MIT1002_01464	0.39	-0.1
1,619,127	-		MIT1002_01464	0.39	-0.0
1,619,134	+		MIT1002_01464	0.40	+0.3
1,619,196	-		MIT1002_01464	0.49	-0.3
1,619,196	-		MIT1002_01464	0.49	-4.5
1,619,343	-		MIT1002_01464	0.70	-1.6
1,619,343	-		MIT1002_01464	0.70	+2.7
1,619,492	+				+0.9
1,619,560	+				+0.8
1,619,570	-				+0.5
1,619,576	+				-1.5
1,619,757	+				+2.4
1,619,812	+				-0.3
1,619,812	+				+0.8
1,619,820	-				+0.8
1,619,820	-				+0.0
1,619,820	-				+1.9
1,619,820	-				+1.1
1,619,832	+				-2.8
1,619,840	-				+0.4