Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01459

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 3
1,611,118	+		MIT1002_01458	0.71	-0.6
1,611,290	-		MIT1002_01458	0.86	-2.4
1,611,460	-				-0.3
1,611,482	-				+1.9
1,611,530	-				-0.1
1,611,659	+				+1.3
1,611,714	+				+1.0
1,611,743	+				-2.0
1,611,935	+		MIT1002_01459	0.37	-0.3
1,611,996	-		MIT1002_01459	0.49	-2.5
1,612,037	-		MIT1002_01459	0.58	-0.9
1,612,136	-		MIT1002_01459	0.78	+0.7
1,612,169	-		MIT1002_01459	0.85	-1.1
1,612,180	-		MIT1002_01459	0.87	-0.2
1,612,205	+				+2.3
1,612,213	-				+1.8
1,612,406	+		MIT1002_01460	0.29	-0.9
1,612,416	+		MIT1002_01460	0.35	+0.1
1,612,456	-		MIT1002_01460	0.63	+0.2
1,612,516	-				+2.4
1,612,529	-				-0.6
1,612,561	-				+1.8
1,612,561	-				-0.3
1,612,578	-				+0.3
1,612,630	+				+0.5
1,612,657	-				-1.1
1,612,684	+				-0.3
1,612,719	+				+0.5
1,612,808	-		MIT1002_01461	0.16	+0.8
1,612,945	+		MIT1002_01461	0.26	-2.6
1,613,046	+		MIT1002_01461	0.34	+0.4
1,613,059	+		MIT1002_01461	0.35	+1.3
1,613,071	+		MIT1002_01461	0.36	-3.0
1,613,077	-		MIT1002_01461	0.37	-1.3
1,613,077	-		MIT1002_01461	0.37	-0.2
1,613,107	-		MIT1002_01461	0.39	-0.1
1,613,173	+		MIT1002_01461	0.44	-3.5
1,613,204	-		MIT1002_01461	0.47	-3.0
1,613,220	-		MIT1002_01461	0.48	-0.3
1,613,236	+		MIT1002_01461	0.49	+1.0