Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01439

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 3
1,582,420	+		MIT1002_01438	0.51	-2.6
1,582,420	+		MIT1002_01438	0.51	+1.2
1,582,420	+		MIT1002_01438	0.51	-4.9
1,582,427	+		MIT1002_01438	0.52	+2.4
1,582,427	+		MIT1002_01438	0.52	+0.8
1,582,427	+		MIT1002_01438	0.52	+1.0
1,582,427	+		MIT1002_01438	0.52	-0.3
1,582,427	+		MIT1002_01438	0.52	+1.1
1,582,435	-		MIT1002_01438	0.53	+1.2
1,582,435	-		MIT1002_01438	0.53	+0.7
1,582,435	-		MIT1002_01438	0.53	+1.1
1,582,507	-		MIT1002_01438	0.64	+0.5
1,582,542	-		MIT1002_01438	0.69	+1.7
1,582,544	-		MIT1002_01438	0.69	+1.1
1,582,627	+		MIT1002_01438	0.82	-1.2
1,582,635	-		MIT1002_01438	0.83	-1.5
1,582,688	-				-0.6
1,582,909	+				+1.7
1,582,917	-				+1.9
1,582,917	-				+0.5
1,582,920	+				+0.0
1,582,928	-				-0.4
1,582,995	+				+0.7
1,582,998	-				+1.3
1,583,002	+				+0.8
1,583,002	+				+1.5
1,583,002	+				-2.5
1,583,002	+				-0.8
1,583,002	+				+0.4
1,583,003	-				-2.5
1,583,008	-				+1.6
1,583,010	-				-0.3
1,583,010	-				+1.2
1,583,014	+				-0.7
1,583,140	+				-2.4
1,583,146	-				+0.3
1,583,172	+				+0.8
1,583,172	+				-2.7
1,583,172	+				+1.2
1,583,172	+				-3.4
1,583,172	+				-2.2
1,583,180	-				+0.0
1,583,180	-				+2.8
1,583,182	+				+0.1
1,583,272	+				-1.1
1,583,314	+		MIT1002_01439	0.15	+0.4
1,583,314	+		MIT1002_01439	0.15	-0.0
1,583,314	+		MIT1002_01439	0.15	+0.4
1,583,322	-		MIT1002_01439	0.17	-1.3
1,583,322	-		MIT1002_01439	0.17	+1.6
1,583,359	+		MIT1002_01439	0.27	-4.2
1,583,365	+		MIT1002_01439	0.28	+0.1
1,583,386	-		MIT1002_01439	0.34	-1.6
1,583,406	+		MIT1002_01439	0.39	-0.0
1,583,406	+		MIT1002_01439	0.39	+1.8
1,583,415	-		MIT1002_01439	0.42	+0.2
1,583,421	-		MIT1002_01439	0.43	+0.9
1,583,426	-		MIT1002_01439	0.44	+1.8
1,583,532	+		MIT1002_01439	0.72	+0.6
1,583,532	+		MIT1002_01439	0.72	-0.8
1,583,532	+		MIT1002_01439	0.72	-3.7
1,583,540	-		MIT1002_01439	0.75	+0.2
1,583,540	-		MIT1002_01439	0.75	-2.1
1,583,540	-		MIT1002_01439	0.75	+1.4
1,583,599	+				-0.2
1,583,667	-				-4.0
1,583,725	+				-3.4
1,583,767	-				+0.4
1,583,801	+				-2.2
1,583,801	-				-1.1
1,583,814	-				+0.4
1,583,819	-				-0.6
1,583,885	+				+0.1
1,583,887	+				-0.2
1,583,902	-		MIT1002_01440	0.11	-4.9
1,583,902	-		MIT1002_01440	0.11	+1.2
1,583,959	-		MIT1002_01440	0.15	+0.2
1,583,959	-		MIT1002_01440	0.15	-0.8
1,583,991	+		MIT1002_01440	0.18	+0.3
1,584,014	-		MIT1002_01440	0.19	-1.9
1,584,024	+		MIT1002_01440	0.20	+0.8
1,584,126	+		MIT1002_01440	0.28	-3.9
1,584,243	+		MIT1002_01440	0.37	+0.4
1,584,330	+		MIT1002_01440	0.44	-3.9
1,584,360	-		MIT1002_01440	0.46	-2.1
1,584,496	-		MIT1002_01440	0.57	-0.6
1,584,554	-		MIT1002_01440	0.61	-2.8
1,584,601	+		MIT1002_01440	0.65	-2.8
1,584,601	+		MIT1002_01440	0.65	+1.3
1,584,601	+		MIT1002_01440	0.65	+0.5
1,584,601	+		MIT1002_01440	0.65	+0.3
1,584,609	-		MIT1002_01440	0.66	-0.2