Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01424

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 3
1,567,512	-				+1.5
1,567,514	+				-0.4
1,567,601	+				-1.7
1,567,601	+				-0.6
1,567,641	+				-0.2
1,567,679	+				-2.0
1,567,745	+				-0.3
1,567,753	-		MIT1002_01423	0.12	+0.7
1,567,846	+		MIT1002_01423	0.32	+1.1
1,567,854	-		MIT1002_01423	0.33	-2.5
1,567,854	-		MIT1002_01423	0.33	+0.7
1,567,854	-		MIT1002_01423	0.33	-0.4
1,567,912	+		MIT1002_01423	0.46	+1.6
1,567,971	+		MIT1002_01423	0.58	+1.1
1,568,008	+		MIT1002_01423	0.66	+1.5
1,568,054	+		MIT1002_01423	0.76	+0.0
1,568,054	+		MIT1002_01423	0.76	+1.6
1,568,084	-		MIT1002_01423	0.83	-3.1
1,568,131	-				+0.4
1,568,167	+				+0.6
1,568,169	+				+0.5
1,568,203	+				-1.1
1,568,203	-				-0.1
1,568,203	-				+0.9
1,568,203	-				-0.4
1,568,220	-				-0.1
1,568,361	+				+0.0
1,568,553	-		MIT1002_01424	0.18	-4.5
1,568,556	+		MIT1002_01424	0.19	-0.5
1,568,568	+		MIT1002_01424	0.23	-3.0
1,568,571	-		MIT1002_01424	0.24	+0.1
1,568,576	-		MIT1002_01424	0.26	+0.7
1,568,581	+		MIT1002_01424	0.28	+1.0
1,568,587	-		MIT1002_01424	0.30	-2.0
1,568,587	-		MIT1002_01424	0.30	-1.9
1,568,589	+		MIT1002_01424	0.30	-3.7
1,568,634	-		MIT1002_01424	0.45	-0.6
1,568,655	-		MIT1002_01424	0.52	-2.0
1,568,655	-		MIT1002_01424	0.52	+1.2
1,568,660	-		MIT1002_01424	0.54	+0.2
1,568,665	-		MIT1002_01424	0.56	+0.4
1,568,667	+		MIT1002_01424	0.56	-0.2
1,568,675	-		MIT1002_01424	0.59	-0.9
1,568,821	+				-2.5
1,568,821	+				-3.0
1,568,821	+				-1.5