Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01088

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 3
1,195,291	-		MIT1002_01086	0.87	+1.6
1,195,309	+		MIT1002_01086	0.89	+1.5
1,195,309	+		MIT1002_01086	0.89	+1.6
1,195,328	+				-0.2
1,195,336	-				-2.6
1,195,422	+				-0.9
1,195,455	-				-2.2
1,195,455	-				+0.0
1,195,541	+				+1.3
1,195,551	-		MIT1002_01087	0.11	-4.0
1,195,610	+		MIT1002_01087	0.18	+0.7
1,195,667	-		MIT1002_01087	0.26	-0.0
1,195,688	-		MIT1002_01087	0.28	+0.7
1,195,750	-		MIT1002_01087	0.36	+1.4
1,195,796	-		MIT1002_01087	0.42	-0.3
1,195,803	-		MIT1002_01087	0.43	-3.9
1,195,803	-		MIT1002_01087	0.43	-2.9
1,195,848	-		MIT1002_01087	0.49	+1.8
1,195,960	-		MIT1002_01087	0.63	-2.0
1,195,965	-		MIT1002_01087	0.64	-0.4
1,196,004	-		MIT1002_01087	0.69	+0.3
1,196,158	-		MIT1002_01087	0.88	+0.5
1,196,192	-				+0.2
1,196,226	+				+0.3
1,196,252	-				+1.7
1,196,252	-				-1.0
1,196,257	-				-2.2
1,196,335	+				+1.5
1,196,336	+				+1.1
1,196,344	-				-2.3
1,196,440	+		MIT1002_01088	0.15	+0.1
1,196,480	-		MIT1002_01088	0.18	-0.2
1,196,482	+		MIT1002_01088	0.18	-3.5
1,196,533	+		MIT1002_01088	0.22	+0.5
1,196,534	+		MIT1002_01088	0.22	-0.3
1,196,534	+		MIT1002_01088	0.22	+0.0
1,196,542	-		MIT1002_01088	0.22	-0.4
1,196,544	+		MIT1002_01088	0.23	+0.8
1,196,544	+		MIT1002_01088	0.23	-0.3
1,196,544	+		MIT1002_01088	0.23	-0.1
1,196,550	-		MIT1002_01088	0.23	+0.1
1,196,552	-		MIT1002_01088	0.23	+0.6
1,196,552	-		MIT1002_01088	0.23	-0.6
1,196,598	-		MIT1002_01088	0.27	-0.1
1,196,621	-		MIT1002_01088	0.28	+2.1
1,196,632	+		MIT1002_01088	0.29	+1.1
1,196,700	+		MIT1002_01088	0.34	+0.5
1,196,714	+		MIT1002_01088	0.35	-0.3
1,196,714	+		MIT1002_01088	0.35	+0.3
1,196,722	-		MIT1002_01088	0.36	-1.2
1,196,722	-		MIT1002_01088	0.36	+0.2
1,196,722	-		MIT1002_01088	0.36	+0.9
1,196,732	-		MIT1002_01088	0.37	+1.7
1,196,923	+		MIT1002_01088	0.51	+0.7
1,196,931	-		MIT1002_01088	0.52	+1.1
1,196,933	+		MIT1002_01088	0.52	+0.1
1,196,941	-		MIT1002_01088	0.52	+1.4
1,196,988	+		MIT1002_01088	0.56	-0.2
1,197,029	-		MIT1002_01088	0.59	-3.3
1,197,062	-		MIT1002_01088	0.61	-2.1
1,197,158	-		MIT1002_01088	0.69	+1.4
1,197,161	-		MIT1002_01088	0.69	+0.2
1,197,190	+		MIT1002_01088	0.71	+0.1
1,197,263	+		MIT1002_01088	0.76	-1.8
1,197,271	-		MIT1002_01088	0.77	+2.1
1,197,332	-		MIT1002_01088	0.82	+0.1
1,197,434	+		MIT1002_01088	0.89	+0.3
1,197,500	+				-0.5
1,197,519	-				+1.9
1,197,552	+				-0.1
1,197,552	+				+0.4
1,197,552	+				-0.7
1,197,552	+				-0.1
1,197,560	-				+0.1
1,197,560	-				+0.1
1,197,560	-				-0.2
1,197,583	+				+1.4
1,197,583	+				-1.3
1,197,586	-				-4.1
1,197,586	-				-0.4
1,197,734	+		MIT1002_01089	0.19	-2.4
1,197,742	-		MIT1002_01089	0.21	-2.9
1,197,764	+		MIT1002_01089	0.26	+0.9
1,197,764	+		MIT1002_01089	0.26	-2.7
1,197,764	+		MIT1002_01089	0.26	-2.2
1,197,764	+		MIT1002_01089	0.26	-0.6
1,197,764	+		MIT1002_01089	0.26	-0.3
1,197,764	+		MIT1002_01089	0.26	+1.5
1,197,764	+		MIT1002_01089	0.26	+0.2
1,197,764	+		MIT1002_01089	0.26	+2.7
1,197,764	+		MIT1002_01089	0.26	-1.6
1,197,764	+		MIT1002_01089	0.26	+0.6
1,197,772	-		MIT1002_01089	0.28	-2.9
1,197,772	-		MIT1002_01089	0.28	-0.7
1,197,981	-		MIT1002_01089	0.74	-0.1
1,198,033	-		MIT1002_01089	0.86	-1.3
1,198,035	+		MIT1002_01089	0.86	+0.8
1,198,110	-				+0.5
1,198,121	+				+1.9
1,198,232	-				+1.9
1,198,251	+				-0.7