Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_00950

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 3
1,052,738	+		MIT1002_00949	0.66	-5.0
1,052,744	+		MIT1002_00949	0.66	-3.0
1,052,753	+		MIT1002_00949	0.67	-5.2
1,052,763	+		MIT1002_00949	0.67	-3.7
1,052,849	+		MIT1002_00949	0.73	-3.2
1,052,875	+		MIT1002_00949	0.74	-8.9
1,052,951	-		MIT1002_00949	0.79	-3.7
1,052,960	-		MIT1002_00949	0.80	-6.0
1,052,961	-		MIT1002_00949	0.80	-1.4
1,052,971	+		MIT1002_00949	0.81	-3.8
1,053,013	-		MIT1002_00949	0.83	-4.5
1,053,014	-		MIT1002_00949	0.83	-4.9
1,053,073	-		MIT1002_00949	0.87	-4.4
1,053,080	-		MIT1002_00949	0.88	-3.2
1,053,093	+		MIT1002_00949	0.88	-2.4
1,053,093	+		MIT1002_00949	0.88	-3.9
1,053,101	-		MIT1002_00949	0.89	-6.5
1,053,101	-		MIT1002_00949	0.89	-4.1
1,053,101	-		MIT1002_00949	0.89	-3.0
1,053,103	+		MIT1002_00949	0.89	-4.5
1,053,111	-		MIT1002_00949	0.90	-6.2
1,053,162	-				-2.4
1,053,222	-				-5.6
1,053,222	-				-1.7
1,053,227	-				-4.1
1,053,371	-				-3.8
1,053,463	-				-2.7
1,053,463	-				-3.0
1,053,470	-				-3.3
1,053,472	+				-0.7
1,053,736	-				+0.3
1,053,746	-				-0.5
1,053,770	-				+0.8
1,053,787	+				+1.0
1,053,829	-		MIT1002_00950	0.14	+1.7
1,053,858	+		MIT1002_00950	0.18	-2.2
1,053,874	-		MIT1002_00950	0.20	+0.3
1,053,930	-		MIT1002_00950	0.28	+1.1
1,053,944	-		MIT1002_00950	0.30	+1.1
1,053,948	+		MIT1002_00950	0.30	+0.3
1,053,985	+		MIT1002_00950	0.36	+1.7
1,053,992	+		MIT1002_00950	0.36	+0.3
1,053,997	-		MIT1002_00950	0.37	-0.2
1,054,019	+		MIT1002_00950	0.40	-2.0
1,054,083	-		MIT1002_00950	0.49	+1.2
1,054,131	+		MIT1002_00950	0.55	+1.3
1,054,131	+		MIT1002_00950	0.55	+0.7
1,054,146	+		MIT1002_00950	0.57	-1.4
1,054,200	+		MIT1002_00950	0.65	+1.3
1,054,322	-		MIT1002_00950	0.81	-2.2
1,054,334	+		MIT1002_00950	0.83	-0.6
1,054,344	-		MIT1002_00950	0.84	+1.6
1,054,372	-		MIT1002_00950	0.88	-1.2
1,054,420	+				-2.4
1,054,494	-				-0.9
1,054,567	+				+0.6
1,054,575	-				+0.7