Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_00063

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 3
67,879	+		MIT1002_00062	0.67	+0.9
67,879	+		MIT1002_00062	0.67	-0.2
67,908	+		MIT1002_00062	0.68	-0.2
67,908	+		MIT1002_00062	0.68	+0.3
67,908	+		MIT1002_00062	0.68	-1.8
67,914	-		MIT1002_00062	0.68	-3.2
67,916	-		MIT1002_00062	0.68	+0.3
67,927	-		MIT1002_00062	0.69	+0.4
67,963	-		MIT1002_00062	0.70	+0.1
67,983	-		MIT1002_00062	0.71	+0.5
68,014	-		MIT1002_00062	0.72	-0.6
68,019	-		MIT1002_00062	0.73	+0.7
68,060	-		MIT1002_00062	0.74	+0.1
68,108	+		MIT1002_00062	0.76	-0.2
68,111	-		MIT1002_00062	0.76	+0.1
68,202	-		MIT1002_00062	0.80	-0.7
68,263	+		MIT1002_00062	0.83	+0.6
68,271	-		MIT1002_00062	0.83	-2.6
68,276	-		MIT1002_00062	0.83	+0.7
68,399	+		MIT1002_00062	0.88	+0.2
68,458	+				-2.1
68,471	-				+0.0
68,486	-				-3.3
68,587	+				-0.4
68,599	-				-1.2
68,627	-				-0.6
68,650	-				-1.5
68,712	+				+0.6
68,712	+				-1.2
68,729	+				+0.4
68,730	-				-0.7
68,734	+				+0.6
68,769	+				+0.9
68,769	+				-1.5
68,777	-				+0.5
68,786	+				-0.9
68,786	+				+0.7
68,787	-				-3.0
68,794	-				-0.0
68,855	+				+1.9
68,985	+		MIT1002_00063	0.11	-3.1
69,054	+		MIT1002_00063	0.17	-1.9
69,162	-		MIT1002_00063	0.26	+1.3
69,224	-		MIT1002_00063	0.31	-1.4
69,257	-		MIT1002_00063	0.34	-3.0
69,269	+		MIT1002_00063	0.35	+0.1
69,277	+		MIT1002_00063	0.35	+0.9
69,287	+		MIT1002_00063	0.36	-0.4
69,287	+		MIT1002_00063	0.36	-0.4
69,307	-		MIT1002_00063	0.38	-0.1
69,344	+		MIT1002_00063	0.41	-0.7
69,466	-		MIT1002_00063	0.51	-0.9
69,526	+		MIT1002_00063	0.56	-0.9
69,533	+		MIT1002_00063	0.57	-1.9
69,548	-		MIT1002_00063	0.58	+0.7
69,585	+		MIT1002_00063	0.61	-3.1
69,585	+		MIT1002_00063	0.61	+1.9
69,590	+		MIT1002_00063	0.62	-2.4
69,593	-		MIT1002_00063	0.62	-0.8
69,593	-		MIT1002_00063	0.62	+0.8
69,607	+		MIT1002_00063	0.63	-2.1
69,715	-		MIT1002_00063	0.72	+0.6
69,761	-		MIT1002_00063	0.76	-2.8
69,761	-		MIT1002_00063	0.76	-0.1
69,917	+		MIT1002_00063	0.89	-0.2
69,925	-		MIT1002_00063	0.90	+0.1
69,933	-				+0.0
69,939	+				-1.4
69,939	+				+1.4
69,939	+				-0.5
69,947	-				-1.1
69,962	+				-0.7
69,972	+				-0.0
69,979	+				+0.1
69,979	+				-0.9
69,980	-				-3.4
69,981	-				-0.7
69,987	-				-2.0
70,093	+				-0.0
70,105	+				+1.6
70,124	-				-2.4
70,217	+		MIT1002_00064	0.17	-1.7
70,278	+		MIT1002_00064	0.23	+0.5
70,278	+		MIT1002_00064	0.23	+0.6
70,278	+		MIT1002_00064	0.23	-1.1
70,278	+		MIT1002_00064	0.23	+0.1
70,279	+		MIT1002_00064	0.23	-0.3
70,279	+		MIT1002_00064	0.23	-0.1
70,286	-		MIT1002_00064	0.23	-1.2
70,286	-		MIT1002_00064	0.23	-0.7
70,286	-		MIT1002_00064	0.23	-2.7
70,286	-		MIT1002_00064	0.23	-0.2
70,349	-		MIT1002_00064	0.30	+0.0
70,380	+		MIT1002_00064	0.33	-0.5
70,478	-		MIT1002_00064	0.42	-2.8
70,505	+		MIT1002_00064	0.45	-2.6
70,557	-		MIT1002_00064	0.50	+0.0
70,605	-		MIT1002_00064	0.54	-0.2
70,630	+		MIT1002_00064	0.57	-3.6
70,644	+		MIT1002_00064	0.58	+0.4
70,652	-		MIT1002_00064	0.59	-3.5
70,803	-		MIT1002_00064	0.74	-2.6
70,828	+		MIT1002_00064	0.76	+0.3
70,839	-		MIT1002_00064	0.77	-1.1
70,918	+		MIT1002_00064	0.85	+1.4
70,967	-		MIT1002_00064	0.90	+0.2
71,039	-				+2.3
71,039	-				+0.6