Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS17500

Experiment: planktonic; Day2; NLDM;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	planktonic; Day2; NLDM;
3,836,329	+		LRK53_RS17490	0.52	-1.8
3,836,329	+		LRK53_RS17490	0.52	-2.7
3,836,329	+		LRK53_RS17490	0.52	+0.2
3,836,329	+		LRK53_RS17490	0.52	+2.0
3,836,329	+		LRK53_RS17490	0.52	-1.2
3,836,329	+		LRK53_RS17490	0.52	-0.9
3,836,329	+		LRK53_RS17490	0.52	+0.3
3,836,329	+		LRK53_RS17490	0.52	-3.2
3,836,329	+		LRK53_RS17490	0.52	-0.8
3,836,329	+		LRK53_RS17490	0.52	-1.3
3,836,329	+		LRK53_RS17490	0.52	-1.1
3,836,329	+		LRK53_RS17490	0.52	-0.4
3,836,330	-		LRK53_RS17490	0.52	-2.5
3,836,330	-		LRK53_RS17490	0.52	-1.8
3,836,330	-		LRK53_RS17490	0.52	-2.2
3,836,330	-		LRK53_RS17490	0.52	+0.2
3,836,330	-		LRK53_RS17490	0.52	-0.8
3,836,330	-		LRK53_RS17490	0.52	-2.1
3,836,330	-		LRK53_RS17490	0.52	-0.7
3,836,330	-		LRK53_RS17490	0.52	-0.4
3,836,330	-		LRK53_RS17490	0.52	-0.3
3,836,330	-		LRK53_RS17490	0.52	-2.3
3,836,330	-		LRK53_RS17490	0.52	-1.2
3,836,330	-		LRK53_RS17490	0.52	-0.4
3,836,363	+		LRK53_RS17490	0.56	-0.2
3,836,441	+		LRK53_RS17490	0.67	-0.1
3,836,441	+		LRK53_RS17490	0.67	-1.1
3,836,441	+		LRK53_RS17490	0.67	+0.3
3,836,441	+		LRK53_RS17490	0.67	-0.0
3,836,441	+		LRK53_RS17490	0.67	-0.0
3,836,441	+		LRK53_RS17490	0.67	-1.8
3,836,441	+		LRK53_RS17490	0.67	-1.3
3,836,442	-		LRK53_RS17490	0.67	-1.6
3,836,442	-		LRK53_RS17490	0.67	-0.8
3,836,442	-		LRK53_RS17490	0.67	-1.1
3,836,504	-		LRK53_RS17490	0.76	-0.7
3,836,578	+		LRK53_RS17490	0.86	-0.2
3,836,578	+		LRK53_RS17490	0.86	-0.0
3,836,579	-		LRK53_RS17490	0.86	-0.3
3,836,621	-				+0.6
3,836,621	-				-0.4
3,836,623	+				-2.0
3,836,623	+				-2.7
3,836,623	+				-3.0
3,836,623	+				+0.3
3,836,623	+				+1.2
3,836,624	-				-0.3
3,836,624	-				-1.3
3,836,624	-				-0.3
3,836,624	-				-0.1
3,836,624	-				+1.2
3,836,624	-				+1.6
3,836,801	+		LRK53_RS17495	0.19	+1.2
3,836,801	+		LRK53_RS17495	0.19	-1.7
3,836,802	-		LRK53_RS17495	0.19	+0.3
3,836,802	-		LRK53_RS17495	0.19	-1.3
3,836,838	-		LRK53_RS17495	0.26	+0.6
3,836,861	+		LRK53_RS17495	0.30	-1.7
3,836,862	-		LRK53_RS17495	0.30	+1.8
3,836,862	-		LRK53_RS17495	0.30	+1.2
3,836,903	+		LRK53_RS17495	0.38	+0.2
3,836,903	+		LRK53_RS17495	0.38	-0.7
3,836,904	-		LRK53_RS17495	0.38	-1.0
3,836,904	-		LRK53_RS17495	0.38	-0.0
3,836,904	-		LRK53_RS17495	0.38	-0.4
3,837,372	+		LRK53_RS17500	0.39	+1.6
3,837,372	+		LRK53_RS17500	0.39	-2.3
3,837,372	+		LRK53_RS17500	0.39	-2.0
3,837,372	+		LRK53_RS17500	0.39	-0.4
3,837,372	+		LRK53_RS17500	0.39	-1.6
3,837,372	+		LRK53_RS17500	0.39	-1.7
3,837,373	-		LRK53_RS17500	0.39	-0.2
3,837,373	-		LRK53_RS17500	0.39	+0.6
3,837,373	-		LRK53_RS17500	0.39	-0.3
3,837,373	-		LRK53_RS17500	0.39	-0.0
3,837,373	-		LRK53_RS17500	0.39	+0.3
3,837,373	-		LRK53_RS17500	0.39	-0.1
3,837,579	+				-0.0
3,837,579	+				+0.2
3,837,579	+				+1.4
3,837,579	+				-0.2
3,837,579	+				-1.6
3,837,579	+				+2.6
3,837,579	+				-2.1
3,837,579	+				-2.2
3,837,579	+				-1.8
3,837,579	+				-0.5
3,837,579	+				-1.2
3,837,579	+				-0.8
3,837,580	-				-2.6
3,837,580	-				-2.0
3,837,580	-				-1.8
3,837,580	-				-0.5
3,837,580	-				-0.8
3,837,580	-				-2.7
3,837,580	-				+1.0
3,837,580	-				-0.6
3,837,580	-				+0.3
3,837,580	-				-0.5
3,837,580	-				-1.1
3,837,580	-				+0.3
3,837,714	-		LRK53_RS17505	0.12	-1.6
3,837,714	-		LRK53_RS17505	0.12	-2.4
3,837,714	-		LRK53_RS17505	0.12	-2.7
3,837,724	+		LRK53_RS17505	0.13	-0.7
3,837,724	+		LRK53_RS17505	0.13	+0.2
3,837,724	+		LRK53_RS17505	0.13	-0.9
3,838,069	+		LRK53_RS17505	0.74	+1.0
3,838,070	+		LRK53_RS17505	0.74	+1.0
3,838,070	+		LRK53_RS17505	0.74	-0.9
3,838,070	+		LRK53_RS17505	0.74	-1.7
3,838,070	+		LRK53_RS17505	0.74	+0.1
3,838,070	+		LRK53_RS17505	0.74	-0.5
3,838,070	+		LRK53_RS17505	0.74	-1.4
3,838,070	+		LRK53_RS17505	0.74	-1.9
3,838,070	+		LRK53_RS17505	0.74	-0.9
3,838,070	+		LRK53_RS17505	0.74	-1.0
3,838,070	+		LRK53_RS17505	0.74	-0.0
3,838,070	+		LRK53_RS17505	0.74	-0.3
3,838,070	+		LRK53_RS17505	0.74	-2.4
3,838,070	+		LRK53_RS17505	0.74	-0.2
3,838,070	+		LRK53_RS17505	0.74	-2.5
3,838,070	+		LRK53_RS17505	0.74	-2.0
3,838,070	+		LRK53_RS17505	0.74	-2.4
3,838,070	+		LRK53_RS17505	0.74	-0.2
3,838,070	+		LRK53_RS17505	0.74	-0.3
3,838,070	+		LRK53_RS17505	0.74	+2.2
3,838,071	-		LRK53_RS17505	0.74	-0.4
3,838,071	-		LRK53_RS17505	0.74	-0.2
3,838,071	-		LRK53_RS17505	0.74	-1.5
3,838,071	-		LRK53_RS17505	0.74	+0.2
3,838,071	-		LRK53_RS17505	0.74	-0.2
3,838,071	-		LRK53_RS17505	0.74	-0.5
3,838,071	-		LRK53_RS17505	0.74	-0.3
3,838,071	-		LRK53_RS17505	0.74	+0.3
3,838,071	-		LRK53_RS17505	0.74	+0.2
3,838,071	-		LRK53_RS17505	0.74	-2.2
3,838,071	-		LRK53_RS17505	0.74	+0.2
3,838,071	-		LRK53_RS17505	0.74	-0.3
3,838,071	-		LRK53_RS17505	0.74	-1.7
3,838,071	-		LRK53_RS17505	0.74	-1.8
3,838,071	-		LRK53_RS17505	0.74	+0.3
3,838,071	-		LRK53_RS17505	0.74	+1.2
3,838,071	-		LRK53_RS17505	0.74	-2.5
3,838,071	-		LRK53_RS17505	0.74	-0.4
3,838,071	-		LRK53_RS17505	0.74	+0.5
3,838,290	+		LRK53_RS17510	0.31	-1.3
3,838,290	+		LRK53_RS17510	0.31	-0.6
3,838,290	+		LRK53_RS17510	0.31	+0.3
3,838,291	-		LRK53_RS17510	0.31	+1.9
3,838,291	-		LRK53_RS17510	0.31	-2.0
3,838,291	-		LRK53_RS17510	0.31	-0.8
3,838,343	+		LRK53_RS17510	0.52	+0.1
3,838,343	+		LRK53_RS17510	0.52	-3.6
3,838,463	+				-0.2
3,838,463	+				-0.3