Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS16945

Experiment: planktonic; Day2; NLDM;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	planktonic; Day2; NLDM;
3,719,414	+				-0.4
3,719,414	+				-1.2
3,719,414	+				-0.4
3,719,417	+				-0.8
3,719,417	+				+0.3
3,719,418	-				-0.8
3,719,550	+		LRK53_RS16940	0.14	-2.1
3,720,103	+		LRK53_RS16940	0.74	+0.8
3,720,103	+		LRK53_RS16940	0.74	-0.6
3,720,103	+		LRK53_RS16940	0.74	+2.3
3,720,103	+		LRK53_RS16940	0.74	+0.3
3,720,104	-		LRK53_RS16940	0.74	+1.6
3,720,104	-		LRK53_RS16940	0.74	-0.6
3,720,155	+		LRK53_RS16940	0.80	+0.8
3,720,155	+		LRK53_RS16940	0.80	-0.6
3,720,156	-		LRK53_RS16940	0.80	+0.1
3,720,364	+				-0.8
3,720,364	+				-1.4
3,720,364	+				-0.0
3,720,364	+				-0.6
3,720,364	+				-0.6
3,720,364	+				+0.6
3,720,364	+				+0.2
3,720,364	+				-0.9
3,720,364	+				+0.3
3,720,364	+				+0.6
3,720,364	+				-2.0
3,720,364	+				-0.7
3,720,364	+				-0.8
3,720,364	+				-1.1
3,720,364	+				-0.3
3,720,364	+				-0.5
3,720,364	+				-0.4
3,720,364	+				+0.4
3,720,365	-				-2.1
3,720,365	-				-1.6
3,720,365	-				-0.0
3,720,365	-				-0.2
3,720,365	-				-0.8
3,720,365	-				+0.8
3,720,365	-				+0.3
3,720,365	-				+0.1
3,720,365	-				-0.6
3,720,365	-				-0.0
3,720,365	-				-1.4
3,720,365	-				-1.4
3,720,365	-				-4.0
3,720,454	+				-0.3
3,720,454	+				-0.3
3,720,455	-				-2.4
3,720,455	-				-0.1
3,720,646	+				+0.5
3,720,646	+				-1.8
3,720,646	+				-2.4
3,720,646	+				-0.6
3,720,646	+				-1.6
3,720,646	+				-1.6
3,720,646	+				-2.0
3,720,646	+				-1.0
3,720,646	+				+0.6
3,720,647	-				-0.9
3,720,647	-				-0.7
3,720,647	-				-0.7
3,720,647	-				+1.7
3,720,647	-				-3.0
3,720,820	+		LRK53_RS16945	0.15	-1.8
3,720,820	+		LRK53_RS16945	0.15	-3.9
3,720,820	+		LRK53_RS16945	0.15	-1.3
3,720,820	+		LRK53_RS16945	0.15	-1.5
3,720,820	+		LRK53_RS16945	0.15	-0.7
3,720,820	+		LRK53_RS16945	0.15	+0.9
3,720,821	-		LRK53_RS16945	0.15	-1.6
3,720,821	-		LRK53_RS16945	0.15	-0.6
3,720,821	-		LRK53_RS16945	0.15	-0.4
3,720,821	-		LRK53_RS16945	0.15	-0.2
3,720,821	-		LRK53_RS16945	0.15	-1.9
3,720,868	-		LRK53_RS16945	0.16	+1.8
3,720,868	-		LRK53_RS16945	0.16	-1.5
3,720,907	+		LRK53_RS16945	0.17	-1.6
3,720,907	+		LRK53_RS16945	0.17	-0.4
3,720,908	-		LRK53_RS16945	0.17	+0.5
3,720,908	-		LRK53_RS16945	0.17	+0.6
3,720,908	-		LRK53_RS16945	0.17	-3.3
3,720,908	-		LRK53_RS16945	0.17	-0.0
3,720,908	-		LRK53_RS16945	0.17	-0.7
3,720,908	-		LRK53_RS16945	0.17	+2.1
3,720,908	-		LRK53_RS16945	0.17	+0.6
3,720,908	-		LRK53_RS16945	0.17	-0.8
3,720,961	+		LRK53_RS16945	0.19	-0.7
3,720,961	+		LRK53_RS16945	0.19	-1.2
3,720,961	+		LRK53_RS16945	0.19	-2.9
3,720,961	+		LRK53_RS16945	0.19	-0.8
3,720,961	+		LRK53_RS16945	0.19	-1.4
3,720,961	+		LRK53_RS16945	0.19	-1.3
3,720,961	+		LRK53_RS16945	0.19	-0.6
3,720,961	+		LRK53_RS16945	0.19	+1.1
3,720,961	+		LRK53_RS16945	0.19	-0.4
3,720,961	+		LRK53_RS16945	0.19	-1.6
3,720,961	+		LRK53_RS16945	0.19	-0.1
3,720,961	+		LRK53_RS16945	0.19	-0.5
3,720,961	+		LRK53_RS16945	0.19	-0.3
3,720,961	+		LRK53_RS16945	0.19	-1.0
3,720,961	+		LRK53_RS16945	0.19	-0.7
3,720,962	-		LRK53_RS16945	0.19	-0.7
3,720,962	-		LRK53_RS16945	0.19	-1.1
3,720,962	-		LRK53_RS16945	0.19	-0.9
3,720,962	-		LRK53_RS16945	0.19	-1.9
3,721,399	+		LRK53_RS16945	0.32	+0.2
3,721,399	+		LRK53_RS16945	0.32	-0.5
3,721,399	+		LRK53_RS16945	0.32	-0.0
3,721,400	-		LRK53_RS16945	0.32	-3.1
3,721,400	-		LRK53_RS16945	0.32	-0.5
3,721,400	-		LRK53_RS16945	0.32	+0.8
3,721,579	+		LRK53_RS16945	0.38	-0.9
3,721,579	+		LRK53_RS16945	0.38	-0.8
3,721,579	+		LRK53_RS16945	0.38	-0.8
3,721,579	+		LRK53_RS16945	0.38	-0.5
3,721,579	+		LRK53_RS16945	0.38	-0.0
3,721,579	+		LRK53_RS16945	0.38	+0.1
3,721,579	+		LRK53_RS16945	0.38	+0.4
3,721,579	+		LRK53_RS16945	0.38	-1.9
3,721,579	+		LRK53_RS16945	0.38	+1.2
3,721,579	+		LRK53_RS16945	0.38	-0.6
3,721,579	+		LRK53_RS16945	0.38	-1.0
3,721,580	-		LRK53_RS16945	0.38	-2.3
3,721,580	-		LRK53_RS16945	0.38	+0.1
3,721,580	-		LRK53_RS16945	0.38	-0.7
3,721,580	-		LRK53_RS16945	0.38	-0.0
3,721,580	-		LRK53_RS16945	0.38	-2.2
3,721,580	-		LRK53_RS16945	0.38	-1.5
3,721,580	-		LRK53_RS16945	0.38	-0.7
3,721,580	-		LRK53_RS16945	0.38	+0.1
3,721,647	+		LRK53_RS16945	0.40	-0.2
3,721,734	-		LRK53_RS16945	0.42	-2.7
3,721,734	-		LRK53_RS16945	0.42	-2.4
3,721,734	-		LRK53_RS16945	0.42	-1.6
3,721,734	-		LRK53_RS16945	0.42	+0.5
3,721,758	+		LRK53_RS16945	0.43	-1.4
3,721,759	-		LRK53_RS16945	0.43	-1.2
3,721,759	-		LRK53_RS16945	0.43	+0.3
3,721,759	-		LRK53_RS16945	0.43	+0.6
3,721,759	-		LRK53_RS16945	0.43	-3.1
3,721,759	-		LRK53_RS16945	0.43	-1.4
3,721,759	-		LRK53_RS16945	0.43	-0.4
3,722,142	+		LRK53_RS16945	0.55	+0.1
3,722,142	+		LRK53_RS16945	0.55	-1.3
3,722,142	+		LRK53_RS16945	0.55	+0.1
3,722,142	+		LRK53_RS16945	0.55	-0.9
3,722,143	-		LRK53_RS16945	0.55	-1.6
3,722,143	-		LRK53_RS16945	0.55	-0.4
3,722,143	-		LRK53_RS16945	0.55	+0.4
3,722,143	-		LRK53_RS16945	0.55	-0.2
3,722,143	-		LRK53_RS16945	0.55	-0.2
3,722,143	-		LRK53_RS16945	0.55	-0.2
3,722,143	-		LRK53_RS16945	0.55	-0.9
3,722,143	-		LRK53_RS16945	0.55	-1.0
3,722,143	-		LRK53_RS16945	0.55	+0.5
3,722,143	-		LRK53_RS16945	0.55	-3.5
3,722,143	-		LRK53_RS16945	0.55	-1.7
3,722,233	+		LRK53_RS16945	0.58	-0.2
3,722,233	+		LRK53_RS16945	0.58	-2.2
3,722,233	+		LRK53_RS16945	0.58	-0.0
3,722,234	-		LRK53_RS16945	0.58	-0.3
3,722,234	-		LRK53_RS16945	0.58	-1.2
3,722,234	-		LRK53_RS16945	0.58	-1.3
3,722,234	-		LRK53_RS16945	0.58	-0.0
3,722,257	+		LRK53_RS16945	0.58	+0.8
3,722,257	+		LRK53_RS16945	0.58	-0.7
3,722,257	+		LRK53_RS16945	0.58	-0.2
3,722,257	+		LRK53_RS16945	0.58	+0.9
3,722,257	+		LRK53_RS16945	0.58	-2.2
3,722,257	+		LRK53_RS16945	0.58	-1.1
3,722,257	+		LRK53_RS16945	0.58	-0.2
3,722,257	+		LRK53_RS16945	0.58	-1.1
3,722,257	+		LRK53_RS16945	0.58	+0.1
3,722,257	+		LRK53_RS16945	0.58	-1.9
3,722,257	+		LRK53_RS16945	0.58	-1.6
3,722,257	+		LRK53_RS16945	0.58	+0.3
3,722,257	+		LRK53_RS16945	0.58	-1.9
3,722,257	+		LRK53_RS16945	0.58	-1.6
3,722,258	-		LRK53_RS16945	0.58	-0.4
3,722,258	-		LRK53_RS16945	0.58	-1.9
3,722,258	-		LRK53_RS16945	0.58	-0.9
3,722,258	-		LRK53_RS16945	0.58	-1.3
3,722,258	-		LRK53_RS16945	0.58	+0.6
3,722,258	-		LRK53_RS16945	0.58	-1.6
3,722,258	-		LRK53_RS16945	0.58	-0.9
3,722,258	-		LRK53_RS16945	0.58	-1.1
3,722,356	+		LRK53_RS16945	0.61	-1.6
3,722,356	+		LRK53_RS16945	0.61	-0.4
3,722,357	-		LRK53_RS16945	0.61	+1.0
3,722,575	+		LRK53_RS16945	0.68	+1.1
3,722,575	+		LRK53_RS16945	0.68	-0.4
3,722,575	+		LRK53_RS16945	0.68	-0.8
3,722,576	-		LRK53_RS16945	0.68	-1.3
3,722,576	-		LRK53_RS16945	0.68	-0.7
3,722,713	+		LRK53_RS16945	0.72	-2.7
3,722,713	+		LRK53_RS16945	0.72	-1.2
3,722,713	+		LRK53_RS16945	0.72	-1.0
3,722,713	+		LRK53_RS16945	0.72	-0.7
3,722,713	+		LRK53_RS16945	0.72	-0.4
3,722,713	+		LRK53_RS16945	0.72	-0.2
3,722,713	+		LRK53_RS16945	0.72	-1.9
3,722,713	+		LRK53_RS16945	0.72	+0.5
3,722,713	+		LRK53_RS16945	0.72	-1.0
3,722,713	+		LRK53_RS16945	0.72	-0.9
3,722,713	+		LRK53_RS16945	0.72	-1.6
3,722,714	-		LRK53_RS16945	0.72	+0.7
3,722,714	-		LRK53_RS16945	0.72	+0.2
3,722,714	-		LRK53_RS16945	0.72	+0.1
3,722,714	-		LRK53_RS16945	0.72	+0.1
3,722,714	-		LRK53_RS16945	0.72	+0.1
3,722,714	-		LRK53_RS16945	0.72	-1.9
3,722,714	-		LRK53_RS16945	0.72	-0.4
3,722,724	+		LRK53_RS16945	0.72	-0.3
3,722,724	+		LRK53_RS16945	0.72	+1.8
3,722,725	-		LRK53_RS16945	0.72	-0.7
3,722,725	-		LRK53_RS16945	0.72	+1.1
3,722,725	-		LRK53_RS16945	0.72	-0.3
3,722,725	-		LRK53_RS16945	0.72	-1.9
3,723,091	-		LRK53_RS16945	0.84	+0.1
3,723,395	+				-0.3
3,723,395	+				-1.1
3,723,403	+				+1.8
3,723,624	+				-0.7
3,723,624	+				-0.6
3,723,624	+				-1.3
3,723,625	-				+0.6
3,723,625	-				-1.5
3,723,625	-				+0.8
3,724,147	+		LRK53_RS16950	0.71	-1.2
3,724,147	+		LRK53_RS16950	0.71	-2.3
3,724,147	+		LRK53_RS16950	0.71	-1.0
3,724,148	-		LRK53_RS16950	0.71	-0.2
3,724,148	-		LRK53_RS16950	0.71	-1.4
3,724,148	-		LRK53_RS16950	0.71	+0.6
3,724,148	-		LRK53_RS16950	0.71	+0.3