Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS15580

Experiment: planktonic; Day2; NLDM;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	planktonic; Day2; NLDM;
3,411,486	+		LRK53_RS15565	0.49	-0.2
3,411,486	+		LRK53_RS15565	0.49	-1.5
3,411,486	+		LRK53_RS15565	0.49	-0.5
3,411,486	+		LRK53_RS15565	0.49	-1.2
3,411,486	+		LRK53_RS15565	0.49	+0.4
3,411,486	+		LRK53_RS15565	0.49	-0.6
3,411,486	+		LRK53_RS15565	0.49	-1.1
3,411,486	+		LRK53_RS15565	0.49	-0.8
3,411,486	+		LRK53_RS15565	0.49	-1.2
3,411,486	+		LRK53_RS15565	0.49	+0.2
3,411,486	+		LRK53_RS15565	0.49	+1.4
3,411,487	-		LRK53_RS15565	0.49	+0.4
3,411,487	-		LRK53_RS15565	0.49	-0.8
3,411,487	-		LRK53_RS15565	0.49	-0.2
3,411,487	-		LRK53_RS15565	0.49	-0.0
3,411,487	-		LRK53_RS15565	0.49	-2.3
3,411,487	-		LRK53_RS15565	0.49	-0.1
3,411,546	+		LRK53_RS15565	0.66	-1.2
3,411,547	-		LRK53_RS15565	0.67	-0.4
3,411,557	+		LRK53_RS15565	0.70	-0.6
3,411,557	+		LRK53_RS15565	0.70	-1.2
3,411,557	+		LRK53_RS15565	0.70	-3.1
3,411,557	+		LRK53_RS15565	0.70	-0.9
3,411,557	+		LRK53_RS15565	0.70	-1.7
3,411,558	-		LRK53_RS15565	0.70	-0.7
3,411,558	-		LRK53_RS15565	0.70	-1.9
3,411,558	-		LRK53_RS15565	0.70	-0.4
3,411,558	-		LRK53_RS15565	0.70	-0.4
3,411,642	+				-1.4
3,411,642	+				-1.2
3,411,642	+				-0.9
3,411,643	-				-2.8
3,411,643	-				-2.6
3,411,791	+		LRK53_RS15570	0.25	+0.4
3,411,791	+		LRK53_RS15570	0.25	-0.5
3,411,791	+		LRK53_RS15570	0.25	-0.7
3,411,792	-		LRK53_RS15570	0.26	+1.0
3,411,792	-		LRK53_RS15570	0.26	-1.5
3,411,792	-		LRK53_RS15570	0.26	-0.2
3,411,792	-		LRK53_RS15570	0.26	-1.8
3,411,792	-		LRK53_RS15570	0.26	-2.6
3,411,792	-		LRK53_RS15570	0.26	+0.8
3,411,792	-		LRK53_RS15570	0.26	-3.0
3,411,792	-		LRK53_RS15570	0.26	+0.8
3,411,792	-		LRK53_RS15570	0.26	-1.3
3,411,792	-		LRK53_RS15570	0.26	-1.2
3,411,815	+		LRK53_RS15570	0.38	-0.7
3,411,815	+		LRK53_RS15570	0.38	-0.5
3,411,815	+		LRK53_RS15570	0.38	-2.0
3,411,815	+		LRK53_RS15570	0.38	-3.9
3,411,815	+		LRK53_RS15570	0.38	-2.2
3,411,815	+		LRK53_RS15570	0.38	-0.5
3,411,815	+		LRK53_RS15570	0.38	+0.9
3,411,815	+		LRK53_RS15570	0.38	+0.3
3,411,815	+		LRK53_RS15570	0.38	-0.9
3,411,815	+		LRK53_RS15570	0.38	+1.6
3,411,815	+		LRK53_RS15570	0.38	-0.3
3,411,815	+		LRK53_RS15570	0.38	-0.6
3,411,816	-		LRK53_RS15570	0.39	-1.1
3,411,816	-		LRK53_RS15570	0.39	-1.4
3,411,816	-		LRK53_RS15570	0.39	-0.3
3,411,816	-		LRK53_RS15570	0.39	-1.1
3,411,943	+				+0.4
3,411,943	+				-2.7
3,411,944	-				-0.8
3,411,944	-				-1.1
3,411,944	-				-0.8
3,411,944	-				-2.8
3,411,971	+				-1.2
3,411,971	+				+1.4
3,411,971	+				-1.4
3,411,971	+				-1.1
3,411,971	+				-0.5
3,411,972	-				-1.4
3,411,972	-				-0.7
3,411,972	-				-1.1
3,411,972	-				+1.6
3,412,007	+		LRK53_RS15575	0.13	-2.9
3,412,007	+		LRK53_RS15575	0.13	-2.3
3,412,008	-		LRK53_RS15575	0.13	+0.6
3,412,008	-		LRK53_RS15575	0.13	-1.5
3,412,157	+		LRK53_RS15575	0.47	+0.6
3,412,157	+		LRK53_RS15575	0.47	-1.3
3,412,158	-		LRK53_RS15575	0.47	+0.2
3,412,158	-		LRK53_RS15575	0.47	-1.3
3,412,238	+		LRK53_RS15575	0.65	-3.0
3,412,238	+		LRK53_RS15575	0.65	+0.7
3,412,238	+		LRK53_RS15575	0.65	-2.2
3,412,239	-		LRK53_RS15575	0.66	-0.5
3,412,239	-		LRK53_RS15575	0.66	-1.7
3,412,239	-		LRK53_RS15575	0.66	-1.8
3,412,239	-		LRK53_RS15575	0.66	-1.7
3,412,239	-		LRK53_RS15575	0.66	-0.3
3,412,239	-		LRK53_RS15575	0.66	-0.9
3,412,239	-		LRK53_RS15575	0.66	+0.4
3,412,239	-		LRK53_RS15575	0.66	-1.9
3,412,239	-		LRK53_RS15575	0.66	-1.9
3,412,307	+		LRK53_RS15575	0.81	-2.9
3,412,307	+		LRK53_RS15575	0.81	-1.4
3,412,307	+		LRK53_RS15575	0.81	-2.2
3,412,307	+		LRK53_RS15575	0.81	-0.5
3,412,307	+		LRK53_RS15575	0.81	-1.4
3,412,307	+		LRK53_RS15575	0.81	+0.3
3,412,307	+		LRK53_RS15575	0.81	+1.6
3,412,307	+		LRK53_RS15575	0.81	-1.6
3,412,307	+		LRK53_RS15575	0.81	-0.7
3,412,307	+		LRK53_RS15575	0.81	-1.8
3,412,307	+		LRK53_RS15575	0.81	-0.3
3,412,307	+		LRK53_RS15575	0.81	-1.3
3,412,307	+		LRK53_RS15575	0.81	-1.3
3,412,307	+		LRK53_RS15575	0.81	-2.1
3,412,307	+		LRK53_RS15575	0.81	-1.6
3,412,307	+		LRK53_RS15575	0.81	-0.4
3,412,308	-		LRK53_RS15575	0.81	-1.2
3,412,308	-		LRK53_RS15575	0.81	-0.0
3,412,308	-		LRK53_RS15575	0.81	+0.8
3,412,308	-		LRK53_RS15575	0.81	+0.2
3,412,308	-		LRK53_RS15575	0.81	-1.4
3,412,308	-		LRK53_RS15575	0.81	-1.7
3,412,308	-		LRK53_RS15575	0.81	-0.7
3,412,308	-		LRK53_RS15575	0.81	-0.0
3,412,308	-		LRK53_RS15575	0.81	-0.9
3,412,308	-		LRK53_RS15575	0.81	-0.9
3,412,308	-		LRK53_RS15575	0.81	-1.0
3,412,308	-		LRK53_RS15575	0.81	-0.0
3,412,308	-		LRK53_RS15575	0.81	-0.4
3,412,358	+				+1.2
3,412,358	+				-1.1
3,412,487	+		LRK53_RS15580	0.17	-0.5
3,412,487	+		LRK53_RS15580	0.17	-1.8
3,412,487	+		LRK53_RS15580	0.17	-1.5
3,412,487	+		LRK53_RS15580	0.17	-0.2
3,412,487	+		LRK53_RS15580	0.17	-0.5
3,412,487	+		LRK53_RS15580	0.17	-0.0
3,412,487	+		LRK53_RS15580	0.17	-2.1
3,412,487	+		LRK53_RS15580	0.17	-0.8
3,412,487	+		LRK53_RS15580	0.17	-1.2
3,412,487	+		LRK53_RS15580	0.17	-0.2
3,412,487	+		LRK53_RS15580	0.17	-0.1
3,412,487	+		LRK53_RS15580	0.17	+0.2
3,412,487	+		LRK53_RS15580	0.17	-1.4
3,412,487	+		LRK53_RS15580	0.17	-2.1
3,412,487	+		LRK53_RS15580	0.17	-0.4
3,412,487	+		LRK53_RS15580	0.17	-2.3
3,412,487	+		LRK53_RS15580	0.17	-1.2
3,412,487	+		LRK53_RS15580	0.17	-0.0
3,412,487	+		LRK53_RS15580	0.17	-0.8
3,412,487	+		LRK53_RS15580	0.17	-1.6
3,412,487	+		LRK53_RS15580	0.17	-0.2
3,412,487	+		LRK53_RS15580	0.17	-2.0
3,412,488	-		LRK53_RS15580	0.17	-0.3
3,412,488	-		LRK53_RS15580	0.17	-0.8
3,412,488	-		LRK53_RS15580	0.17	-1.5
3,412,488	-		LRK53_RS15580	0.17	-0.4
3,412,488	-		LRK53_RS15580	0.17	-1.0
3,412,488	-		LRK53_RS15580	0.17	-0.8
3,412,488	-		LRK53_RS15580	0.17	+2.2
3,412,488	-		LRK53_RS15580	0.17	-4.0
3,412,488	-		LRK53_RS15580	0.17	-1.8
3,412,488	-		LRK53_RS15580	0.17	-0.9
3,412,488	-		LRK53_RS15580	0.17	-2.2
3,412,488	-		LRK53_RS15580	0.17	-0.2
3,412,488	-		LRK53_RS15580	0.17	-1.2
3,412,488	-		LRK53_RS15580	0.17	-1.6
3,412,488	-		LRK53_RS15580	0.17	-0.4
3,412,488	-		LRK53_RS15580	0.17	-0.7
3,412,488	-		LRK53_RS15580	0.17	-0.9
3,412,488	-		LRK53_RS15580	0.17	-0.4
3,412,488	-		LRK53_RS15580	0.17	-0.8
3,412,491	+		LRK53_RS15580	0.18	+0.3
3,412,491	+		LRK53_RS15580	0.18	+0.3
3,412,491	+		LRK53_RS15580	0.18	-1.5
3,412,491	+		LRK53_RS15580	0.18	+0.1
3,412,491	+		LRK53_RS15580	0.18	-2.0
3,412,491	+		LRK53_RS15580	0.18	-1.8
3,412,491	+		LRK53_RS15580	0.18	-0.5
3,412,491	+		LRK53_RS15580	0.18	-0.2
3,412,491	+		LRK53_RS15580	0.18	-0.2
3,412,492	-		LRK53_RS15580	0.18	-0.8
3,412,492	-		LRK53_RS15580	0.18	+1.0
3,412,492	-		LRK53_RS15580	0.18	-1.0
3,412,492	-		LRK53_RS15580	0.18	-2.6
3,412,492	-		LRK53_RS15580	0.18	-0.4
3,412,492	-		LRK53_RS15580	0.18	-1.5
3,412,492	-		LRK53_RS15580	0.18	-0.6
3,412,492	-		LRK53_RS15580	0.18	-1.3
3,412,492	-		LRK53_RS15580	0.18	+0.8
3,412,492	-		LRK53_RS15580	0.18	-0.2
3,412,492	-		LRK53_RS15580	0.18	-0.5
3,412,492	-		LRK53_RS15580	0.18	-3.4
3,412,492	-		LRK53_RS15580	0.18	+0.3
3,412,492	-		LRK53_RS15580	0.18	-1.5
3,412,492	-		LRK53_RS15580	0.18	+0.2
3,412,596	+		LRK53_RS15580	0.43	-1.2
3,412,596	+		LRK53_RS15580	0.43	+0.8
3,412,596	+		LRK53_RS15580	0.43	-1.5
3,412,596	+		LRK53_RS15580	0.43	-0.0
3,412,596	+		LRK53_RS15580	0.43	-0.3
3,412,596	+		LRK53_RS15580	0.43	+0.8
3,412,597	-		LRK53_RS15580	0.44	-0.9
3,412,597	-		LRK53_RS15580	0.44	+0.2
3,412,597	-		LRK53_RS15580	0.44	-0.9
3,412,597	-		LRK53_RS15580	0.44	-0.6
3,412,597	-		LRK53_RS15580	0.44	-0.5
3,413,115	+		LRK53_RS15585	0.11	+0.5
3,413,115	+		LRK53_RS15585	0.11	-0.5
3,413,115	+		LRK53_RS15585	0.11	-0.2
3,413,116	-		LRK53_RS15585	0.11	-0.4
3,413,116	-		LRK53_RS15585	0.11	-0.4
3,413,116	-		LRK53_RS15585	0.11	+0.6
3,413,116	-		LRK53_RS15585	0.11	-0.3
3,413,268	+		LRK53_RS15585	0.17	+0.2
3,413,269	-		LRK53_RS15585	0.17	-0.2
3,413,544	+		LRK53_RS15585	0.28	-0.0
3,413,545	-		LRK53_RS15585	0.28	+0.4
3,413,557	-		LRK53_RS15585	0.28	-1.0
3,413,785	-		LRK53_RS15585	0.38	-1.4