Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS14530

Experiment: planktonic; Day2; NLDM;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	planktonic; Day2; NLDM;
3,182,050	+		LRK53_RS14525	0.74	+0.0
3,182,051	-		LRK53_RS14525	0.75	-2.4
3,182,086	+		LRK53_RS14525	0.79	+2.3
3,182,086	+		LRK53_RS14525	0.79	+0.7
3,182,086	+		LRK53_RS14525	0.79	-2.7
3,182,086	+		LRK53_RS14525	0.79	-0.4
3,182,087	-		LRK53_RS14525	0.79	+0.1
3,182,087	-		LRK53_RS14525	0.79	+0.6
3,182,087	-		LRK53_RS14525	0.79	-0.9
3,182,173	+		LRK53_RS14525	0.89	-2.8
3,182,264	-				-0.9
3,182,264	-				-0.2
3,182,264	-				-0.9
3,182,264	-				-0.7
3,182,279	-				-1.5
3,182,427	+				-1.0
3,182,585	+				+0.4
3,182,585	+				+0.3
3,182,585	+				+0.2
3,182,586	-				+0.2
3,182,586	-				+0.6
3,182,586	-				-0.5
3,182,586	-				-0.4
3,182,586	-				-0.2
3,182,642	+		LRK53_RS14530	0.12	+1.2
3,182,642	+		LRK53_RS14530	0.12	-0.6
3,182,642	+		LRK53_RS14530	0.12	-1.0
3,182,643	-		LRK53_RS14530	0.12	-0.5
3,182,643	-		LRK53_RS14530	0.12	-1.6
3,182,643	-		LRK53_RS14530	0.12	-0.6
3,182,864	+		LRK53_RS14530	0.67	+1.2
3,182,864	+		LRK53_RS14530	0.67	+0.2
3,182,864	+		LRK53_RS14530	0.67	-0.2
3,182,864	+		LRK53_RS14530	0.67	-0.5
3,182,864	+		LRK53_RS14530	0.67	-0.6
3,182,864	+		LRK53_RS14530	0.67	-1.0
3,182,864	+		LRK53_RS14530	0.67	-0.2
3,182,865	-		LRK53_RS14530	0.67	+0.2
3,182,870	+		LRK53_RS14530	0.68	-1.7
3,182,870	+		LRK53_RS14530	0.68	-0.5
3,182,870	+		LRK53_RS14530	0.68	+1.6
3,182,870	+		LRK53_RS14530	0.68	+0.0
3,182,870	+		LRK53_RS14530	0.68	-1.0
3,182,870	+		LRK53_RS14530	0.68	-0.4
3,182,870	+		LRK53_RS14530	0.68	-1.4
3,182,870	+		LRK53_RS14530	0.68	-1.4
3,182,870	+		LRK53_RS14530	0.68	-1.0
3,182,870	+		LRK53_RS14530	0.68	+1.6
3,182,870	+		LRK53_RS14530	0.68	+0.8
3,182,870	+		LRK53_RS14530	0.68	-1.4
3,182,870	+		LRK53_RS14530	0.68	+0.1
3,182,871	-		LRK53_RS14530	0.69	-1.3
3,182,871	-		LRK53_RS14530	0.69	-0.8
3,182,871	-		LRK53_RS14530	0.69	-0.1
3,182,871	-		LRK53_RS14530	0.69	+0.2
3,182,871	-		LRK53_RS14530	0.69	-0.2
3,182,871	-		LRK53_RS14530	0.69	-2.0
3,182,871	-		LRK53_RS14530	0.69	-2.0
3,182,871	-		LRK53_RS14530	0.69	-0.4
3,182,871	-		LRK53_RS14530	0.69	+0.4
3,182,871	-		LRK53_RS14530	0.69	-1.4
3,182,871	-		LRK53_RS14530	0.69	+1.4
3,182,871	-		LRK53_RS14530	0.69	+0.9
3,182,871	-		LRK53_RS14530	0.69	+0.0
3,182,871	-		LRK53_RS14530	0.69	-0.6
3,182,871	-		LRK53_RS14530	0.69	-1.1
3,182,871	-		LRK53_RS14530	0.69	-0.2
3,182,871	-		LRK53_RS14530	0.69	+1.6
3,182,918	+		LRK53_RS14530	0.80	-1.0
3,182,918	+		LRK53_RS14530	0.80	-1.8
3,182,918	+		LRK53_RS14530	0.80	-1.9
3,182,918	+		LRK53_RS14530	0.80	+2.2
3,182,918	+		LRK53_RS14530	0.80	+0.4
3,182,918	+		LRK53_RS14530	0.80	-0.2
3,182,919	-		LRK53_RS14530	0.80	-1.2
3,182,919	-		LRK53_RS14530	0.80	+0.0
3,182,919	-		LRK53_RS14530	0.80	-1.5
3,182,919	-		LRK53_RS14530	0.80	-1.1
3,183,282	+				+0.1
3,183,282	+				-1.1
3,183,282	+				+0.8
3,183,282	+				-1.4
3,183,282	+				-1.2
3,183,282	+				-1.3
3,183,282	+				-1.1
3,183,283	-				+0.1
3,183,283	-				+0.4
3,183,283	-				-0.8
3,183,283	-				-0.5
3,183,324	-				-1.2
3,183,421	+				-0.5
3,183,421	+				-1.1
3,183,421	+				-2.3
3,183,421	+				-0.6
3,183,421	+				-1.4
3,183,422	-				+1.1
3,183,422	-				-1.0
3,183,422	-				+4.2
3,183,598	+		LRK53_RS14535	0.14	-0.2
3,183,599	-		LRK53_RS14535	0.14	-1.1
3,183,599	-		LRK53_RS14535	0.14	-1.2
3,183,599	-		LRK53_RS14535	0.14	-0.2
3,183,599	-		LRK53_RS14535	0.14	-0.6
3,183,742	+		LRK53_RS14535	0.20	-1.2
3,183,742	+		LRK53_RS14535	0.20	-1.4
3,183,742	+		LRK53_RS14535	0.20	+0.8
3,183,742	+		LRK53_RS14535	0.20	+0.2
3,183,742	+		LRK53_RS14535	0.20	-0.6
3,183,743	-		LRK53_RS14535	0.20	+0.2
3,183,743	-		LRK53_RS14535	0.20	-2.2
3,183,743	-		LRK53_RS14535	0.20	-1.4
3,183,793	+		LRK53_RS14535	0.23	-1.0
3,183,793	+		LRK53_RS14535	0.23	-0.2
3,183,794	-		LRK53_RS14535	0.23	+0.2
3,183,794	-		LRK53_RS14535	0.23	-0.3
3,183,907	+		LRK53_RS14535	0.28	-0.1
3,183,907	+		LRK53_RS14535	0.28	-0.2
3,183,908	-		LRK53_RS14535	0.28	-2.7
3,183,908	-		LRK53_RS14535	0.28	-0.2
3,183,908	-		LRK53_RS14535	0.28	-1.1
3,183,908	-		LRK53_RS14535	0.28	+0.2
3,183,908	-		LRK53_RS14535	0.28	-0.4
3,183,908	-		LRK53_RS14535	0.28	-0.2
3,183,925	+		LRK53_RS14535	0.28	-2.2
3,183,926	-		LRK53_RS14535	0.28	-0.6