Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS12550

Experiment: planktonic; Day2; NLDM;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	planktonic; Day2; NLDM;
2,777,345	+		LRK53_RS12540	0.89	-0.8
2,777,345	+		LRK53_RS12540	0.89	-0.2
2,777,384	+				+0.5
2,777,384	+				+0.6
2,777,384	+				-2.2
2,777,384	+				-1.5
2,777,385	-				-0.4
2,777,385	-				-1.1
2,777,385	-				+0.1
2,777,385	-				-0.1
2,777,385	-				-0.5
2,777,385	-				-1.1
2,777,537	+				-0.1
2,777,537	+				-2.4
2,777,537	+				+0.1
2,777,537	+				+0.6
2,777,537	+				-2.1
2,777,537	+				-3.3
2,777,537	+				-0.8
2,777,537	+				+0.1
2,777,537	+				-0.7
2,777,537	+				-0.5
2,777,538	-				-2.0
2,777,538	-				-1.2
2,777,538	-				-0.4
2,777,538	-				+2.1
2,777,538	-				-0.8
2,777,538	-				-1.2
2,777,538	-				-1.6
2,777,569	+				+0.4
2,777,569	+				-1.0
2,777,713	+		LRK53_RS12545	0.55	+0.1
2,777,713	+		LRK53_RS12545	0.55	-0.7
2,777,713	+		LRK53_RS12545	0.55	-1.8
2,777,713	+		LRK53_RS12545	0.55	-0.4
2,777,713	+		LRK53_RS12545	0.55	-0.4
2,777,713	+		LRK53_RS12545	0.55	+2.1
2,777,713	+		LRK53_RS12545	0.55	+1.0
2,777,714	-		LRK53_RS12545	0.55	-3.1
2,777,714	-		LRK53_RS12545	0.55	-0.2
2,777,714	-		LRK53_RS12545	0.55	-1.7
2,777,714	-		LRK53_RS12545	0.55	-0.8
2,777,714	-		LRK53_RS12545	0.55	-1.3
2,777,714	-		LRK53_RS12545	0.55	+0.6
2,777,714	-		LRK53_RS12545	0.55	-1.4
2,777,744	-		LRK53_RS12545	0.67	+1.1
2,777,744	-		LRK53_RS12545	0.67	-0.5
2,778,003	+				-0.9
2,778,003	+				-1.5
2,778,003	+				-0.5
2,778,003	+				-2.7
2,778,003	+				-0.4
2,778,003	+				-0.8
2,778,003	+				-0.4
2,778,003	+				-1.0
2,778,003	+				-0.9
2,778,003	+				-1.1
2,778,003	+				-1.4
2,778,003	+				-2.7
2,778,003	+				-0.7
2,778,003	+				-1.3
2,778,003	+				-0.7
2,778,003	+				-2.5
2,778,003	+				-2.2
2,778,003	+				-1.2
2,778,003	+				+0.1
2,778,003	+				-2.4
2,778,003	+				-0.9
2,778,003	+				-1.9
2,778,003	+				+0.5
2,778,003	+				-1.2
2,778,003	+				-1.7
2,778,003	+				+0.5
2,778,003	+				-2.4
2,778,003	+				-1.7
2,778,003	+				-0.1
2,778,003	+				-1.0
2,778,003	+				+0.2
2,778,003	+				-0.4
2,778,003	+				+2.6
2,778,003	+				-1.1
2,778,003	+				-2.5
2,778,003	+				-0.4
2,778,003	+				+0.3
2,778,003	+				-1.3
2,778,003	+				+0.4
2,778,003	+				-0.8
2,778,003	+				-1.7
2,778,003	+				-0.1
2,778,003	+				-1.1
2,778,003	+				-0.3
2,778,003	+				-0.5
2,778,003	+				-0.1
2,778,003	+				-2.2
2,778,003	+				-2.6
2,778,003	+				-0.1
2,778,003	+				-1.9
2,778,003	+				-0.0
2,778,003	+				-1.8
2,778,003	+				-1.2
2,778,004	-				-3.0
2,778,004	-				-1.0
2,778,004	-				-0.4
2,778,004	-				+0.9
2,778,004	-				-1.5
2,778,004	-				+0.6
2,778,004	-				+0.9
2,778,004	-				+0.8
2,778,004	-				-0.4
2,778,004	-				-0.9
2,778,004	-				-0.2
2,778,004	-				-0.9
2,778,004	-				-0.7
2,778,004	-				-0.1
2,778,004	-				+0.3
2,778,004	-				-0.1
2,778,004	-				-1.8
2,778,004	-				-2.2
2,778,004	-				+0.8
2,778,004	-				-1.0
2,778,004	-				+1.5
2,778,004	-				-0.3
2,778,004	-				-2.3
2,778,004	-				-1.8
2,778,004	-				+3.1
2,778,004	-				-2.1
2,778,004	-				+0.5
2,778,004	-				-2.1
2,778,004	-				-0.2
2,778,004	-				-0.5
2,778,004	-				-0.1
2,778,004	-				-0.8
2,778,004	-				-1.4
2,778,004	-				-0.6
2,778,004	-				-0.8
2,778,004	-				-0.7
2,778,004	-				-1.9
2,778,064	+				-0.8
2,778,064	+				+3.1
2,778,064	+				-1.0
2,778,064	+				-0.9
2,778,065	-				-1.1
2,778,065	-				-2.7
2,778,065	-				-1.4
2,778,065	-				-0.3
2,778,065	-				+0.5
2,778,245	+				-0.9
2,778,245	+				-1.4
2,778,245	+				+0.3
2,778,245	+				-1.3
2,778,245	+				-0.4
2,778,351	+		LRK53_RS12550	0.35	-2.1
2,778,351	+		LRK53_RS12550	0.35	-0.1
2,778,352	-		LRK53_RS12550	0.35	-1.8
2,778,352	-		LRK53_RS12550	0.35	-1.4
2,778,352	-		LRK53_RS12550	0.35	-1.6
2,778,352	-		LRK53_RS12550	0.35	-1.2
2,778,352	-		LRK53_RS12550	0.35	-1.2
2,778,352	-		LRK53_RS12550	0.35	-3.2
2,778,352	-		LRK53_RS12550	0.35	-1.2
2,778,352	-		LRK53_RS12550	0.35	-1.6
2,778,352	-		LRK53_RS12550	0.35	-2.0
2,778,417	-		LRK53_RS12550	0.51	-1.6
2,778,458	+		LRK53_RS12550	0.61	-2.3
2,778,458	+		LRK53_RS12550	0.61	-0.0
2,778,458	+		LRK53_RS12550	0.61	-1.0
2,778,458	+		LRK53_RS12550	0.61	+0.1
2,778,458	+		LRK53_RS12550	0.61	-1.2
2,778,458	+		LRK53_RS12550	0.61	+0.3
2,778,458	+		LRK53_RS12550	0.61	-0.1
2,778,458	+		LRK53_RS12550	0.61	-0.2
2,778,458	+		LRK53_RS12550	0.61	+0.7
2,778,458	+		LRK53_RS12550	0.61	-1.9
2,778,458	+		LRK53_RS12550	0.61	-3.3
2,778,458	+		LRK53_RS12550	0.61	-1.6
2,778,459	-		LRK53_RS12550	0.61	-2.4
2,778,459	-		LRK53_RS12550	0.61	-1.7
2,778,459	-		LRK53_RS12550	0.61	-0.7
2,778,459	-		LRK53_RS12550	0.61	-0.6
2,778,459	-		LRK53_RS12550	0.61	+0.3
2,778,459	-		LRK53_RS12550	0.61	-2.8
2,778,467	+		LRK53_RS12550	0.63	-2.1
2,778,468	-		LRK53_RS12550	0.63	-2.1
2,778,468	-		LRK53_RS12550	0.63	-1.4
2,778,468	-		LRK53_RS12550	0.63	-0.2
2,778,468	-		LRK53_RS12550	0.63	-1.7
2,778,472	+		LRK53_RS12550	0.64	-1.1
2,778,515	+		LRK53_RS12550	0.75	-0.1
2,778,515	+		LRK53_RS12550	0.75	-1.0
2,778,515	+		LRK53_RS12550	0.75	+0.6
2,778,515	+		LRK53_RS12550	0.75	-1.3
2,778,515	+		LRK53_RS12550	0.75	-0.7
2,778,515	+		LRK53_RS12550	0.75	-0.4
2,778,515	+		LRK53_RS12550	0.75	-1.1
2,778,515	+		LRK53_RS12550	0.75	+2.4
2,778,515	+		LRK53_RS12550	0.75	-1.0
2,778,515	+		LRK53_RS12550	0.75	-0.1
2,778,515	+		LRK53_RS12550	0.75	-1.4
2,778,515	+		LRK53_RS12550	0.75	-1.5
2,778,515	+		LRK53_RS12550	0.75	-1.1
2,778,515	+		LRK53_RS12550	0.75	-1.8
2,778,515	+		LRK53_RS12550	0.75	-1.9
2,778,515	+		LRK53_RS12550	0.75	-1.6
2,778,515	+		LRK53_RS12550	0.75	-0.1
2,778,515	+		LRK53_RS12550	0.75	+0.1
2,778,515	+		LRK53_RS12550	0.75	+1.6
2,778,515	+		LRK53_RS12550	0.75	-1.7
2,778,515	+		LRK53_RS12550	0.75	-0.8
2,778,515	+		LRK53_RS12550	0.75	-0.4
2,778,515	+		LRK53_RS12550	0.75	-0.4
2,778,515	+		LRK53_RS12550	0.75	-0.1
2,778,515	+		LRK53_RS12550	0.75	-0.3
2,778,515	+		LRK53_RS12550	0.75	-0.4
2,778,515	+		LRK53_RS12550	0.75	-0.5
2,778,515	+		LRK53_RS12550	0.75	-0.7
2,778,515	+		LRK53_RS12550	0.75	-1.4
2,778,516	-		LRK53_RS12550	0.75	-2.0
2,778,516	-		LRK53_RS12550	0.75	+1.1
2,778,516	-		LRK53_RS12550	0.75	-2.1
2,778,516	-		LRK53_RS12550	0.75	-3.5
2,778,516	-		LRK53_RS12550	0.75	-2.7
2,778,516	-		LRK53_RS12550	0.75	-1.2
2,778,516	-		LRK53_RS12550	0.75	-2.7
2,778,516	-		LRK53_RS12550	0.75	-0.1
2,778,516	-		LRK53_RS12550	0.75	+0.1
2,778,516	-		LRK53_RS12550	0.75	-1.2
2,778,516	-		LRK53_RS12550	0.75	-2.0
2,778,516	-		LRK53_RS12550	0.75	+0.8
2,778,516	-		LRK53_RS12550	0.75	+0.5
2,778,516	-		LRK53_RS12550	0.75	+0.5
2,778,516	-		LRK53_RS12550	0.75	-0.1
2,778,516	-		LRK53_RS12550	0.75	-0.5
2,778,516	-		LRK53_RS12550	0.75	-1.4
2,778,516	-		LRK53_RS12550	0.75	+1.3
2,778,516	-		LRK53_RS12550	0.75	-0.6
2,778,516	-		LRK53_RS12550	0.75	-2.2
2,778,516	-		LRK53_RS12550	0.75	+0.3
2,778,516	-		LRK53_RS12550	0.75	+0.1
2,778,516	-		LRK53_RS12550	0.75	-0.3
2,778,516	-		LRK53_RS12550	0.75	-0.4
2,778,516	-		LRK53_RS12550	0.75	-2.6
2,778,516	-		LRK53_RS12550	0.75	+0.1
2,778,731	+				-2.1
2,778,731	+				+0.1
2,778,732	-				+0.0
2,778,732	-				-1.1
2,778,784	+				+0.4
2,778,784	+				-0.9
2,778,784	+				-2.2
2,778,784	+				-0.2
2,778,784	+				-2.1
2,778,785	-				-0.4
2,778,785	-				-2.2
2,778,785	-				-0.7
2,778,785	-				-1.8
2,778,787	+				-0.4
2,778,787	+				-0.1
2,778,787	+				-1.7
2,778,787	+				-0.1
2,778,787	+				-1.0
2,778,787	+				-0.5
2,778,787	+				-0.5
2,778,787	+				-1.5
2,778,787	+				-2.8
2,778,787	+				+1.1
2,778,787	+				-1.0
2,778,787	+				-1.6
2,778,787	+				-1.9
2,778,787	+				-0.3
2,778,787	+				-0.5
2,778,787	+				-2.0
2,778,787	+				-1.5
2,778,788	-				-0.9
2,778,788	-				-1.9
2,778,788	-				-0.6
2,778,788	-				-1.4
2,778,788	-				+1.0
2,778,788	-				-0.3
2,778,788	-				-0.5
2,778,788	-				-0.8
2,778,788	-				-0.1
2,778,788	-				-0.2
2,778,788	-				-0.6
2,778,788	-				-1.1
2,778,788	-				-0.8
2,778,788	-				-0.2
2,778,788	-				-0.5
2,778,810	+				-1.1
2,778,810	+				-0.9
2,778,810	+				-1.0
2,778,810	+				-1.4
2,778,810	+				-0.2
2,778,810	+				-0.5
2,778,810	+				-1.1
2,778,810	+				-1.1
2,778,811	-				-1.5
2,778,811	-				-1.7
2,778,811	-				-0.7
2,778,811	-				-1.6
2,778,811	-				+1.2
2,778,811	-				+0.5
2,778,811	-				-0.3
2,778,811	-				-1.2
2,778,811	-				-1.1
2,778,811	-				-1.0
2,778,886	-				-2.8
2,778,886	-				+1.3
2,778,886	-				-1.4
2,779,121	+		LRK53_RS12555	0.25	-1.4
2,779,121	+		LRK53_RS12555	0.25	-2.0
2,779,122	-		LRK53_RS12555	0.25	-0.7
2,779,206	-		LRK53_RS12555	0.31	-0.8
2,779,206	-		LRK53_RS12555	0.31	-1.4
2,779,206	-		LRK53_RS12555	0.31	-0.9
2,779,431	+		LRK53_RS12555	0.46	-0.6