Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS10535

Experiment: planktonic; Day2; NLDM;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	planktonic; Day2; NLDM;
2,352,850	+		LRK53_RS10530	0.32	-0.4
2,352,850	+		LRK53_RS10530	0.32	+0.2
2,352,850	+		LRK53_RS10530	0.32	-1.6
2,352,850	+		LRK53_RS10530	0.32	-2.4
2,352,878	+		LRK53_RS10530	0.34	-1.4
2,353,030	-		LRK53_RS10530	0.48	-1.7
2,353,175	+		LRK53_RS10530	0.61	-1.1
2,353,230	+		LRK53_RS10530	0.65	-0.4
2,353,231	-		LRK53_RS10530	0.66	-1.5
2,353,231	-		LRK53_RS10530	0.66	-1.9
2,353,507	-		LRK53_RS10530	0.90	-1.3
2,353,507	-		LRK53_RS10530	0.90	+0.2
2,353,507	-		LRK53_RS10530	0.90	-0.7
2,353,507	-		LRK53_RS10530	0.90	+1.3
2,353,507	-		LRK53_RS10530	0.90	+1.7
2,353,551	+				-1.0
2,353,551	+				-0.9
2,353,552	-				-1.5
2,353,591	+				-0.6
2,353,591	+				-0.4
2,353,591	+				-1.6
2,353,592	-				-0.9
2,353,592	-				+0.9
2,353,708	+				-2.3
2,353,708	+				+0.1
2,353,798	+		LRK53_RS10535	0.15	+0.1
2,353,798	+		LRK53_RS10535	0.15	-0.9
2,353,799	-		LRK53_RS10535	0.15	-0.8
2,354,079	-		LRK53_RS10535	0.38	-2.5
2,354,092	+		LRK53_RS10535	0.39	-0.1
2,354,092	+		LRK53_RS10535	0.39	-0.7
2,354,092	+		LRK53_RS10535	0.39	+0.4
2,354,092	+		LRK53_RS10535	0.39	-1.1
2,354,093	-		LRK53_RS10535	0.39	-1.8
2,354,093	-		LRK53_RS10535	0.39	+1.3
2,354,104	+		LRK53_RS10535	0.40	-1.0
2,354,104	+		LRK53_RS10535	0.40	-1.3
2,354,104	+		LRK53_RS10535	0.40	-0.1
2,354,104	+		LRK53_RS10535	0.40	-1.8
2,354,104	+		LRK53_RS10535	0.40	-0.3
2,354,105	-		LRK53_RS10535	0.40	-2.3
2,354,105	-		LRK53_RS10535	0.40	-1.9
2,354,105	-		LRK53_RS10535	0.40	+0.3
2,354,105	-		LRK53_RS10535	0.40	-0.7
2,354,105	-		LRK53_RS10535	0.40	-0.9
2,354,113	+		LRK53_RS10535	0.41	-0.1
2,354,113	+		LRK53_RS10535	0.41	-1.7
2,354,113	+		LRK53_RS10535	0.41	-2.1
2,354,114	-		LRK53_RS10535	0.41	+0.6
2,354,114	-		LRK53_RS10535	0.41	-0.1
2,354,114	-		LRK53_RS10535	0.41	-0.3
2,354,178	+		LRK53_RS10535	0.46	-0.7
2,354,178	+		LRK53_RS10535	0.46	+2.9
2,354,178	+		LRK53_RS10535	0.46	+0.3
2,354,178	+		LRK53_RS10535	0.46	-0.4
2,354,178	+		LRK53_RS10535	0.46	+0.2
2,354,178	+		LRK53_RS10535	0.46	-1.7
2,354,179	-		LRK53_RS10535	0.46	-1.3
2,354,179	-		LRK53_RS10535	0.46	-1.7
2,354,179	-		LRK53_RS10535	0.46	-0.7
2,354,179	-		LRK53_RS10535	0.46	-1.3
2,354,179	-		LRK53_RS10535	0.46	-0.9
2,354,179	-		LRK53_RS10535	0.46	+0.1
2,354,179	-		LRK53_RS10535	0.46	-0.5
2,354,366	+		LRK53_RS10535	0.62	-2.4
2,354,366	+		LRK53_RS10535	0.62	+1.0
2,354,366	+		LRK53_RS10535	0.62	-1.3
2,354,366	+		LRK53_RS10535	0.62	+0.1
2,354,366	+		LRK53_RS10535	0.62	+0.1
2,354,366	+		LRK53_RS10535	0.62	-1.3
2,354,367	-		LRK53_RS10535	0.62	-1.1
2,354,367	-		LRK53_RS10535	0.62	-0.3
2,354,367	-		LRK53_RS10535	0.62	-1.2
2,354,367	-		LRK53_RS10535	0.62	+0.9
2,354,367	-		LRK53_RS10535	0.62	-1.9
2,354,367	-		LRK53_RS10535	0.62	-2.9
2,354,368	+		LRK53_RS10535	0.62	-1.0
2,354,368	+		LRK53_RS10535	0.62	-0.4
2,354,368	+		LRK53_RS10535	0.62	-0.5
2,354,368	+		LRK53_RS10535	0.62	+1.9
2,354,368	+		LRK53_RS10535	0.62	-2.6
2,354,368	+		LRK53_RS10535	0.62	-2.3
2,354,368	+		LRK53_RS10535	0.62	-2.1
2,354,368	+		LRK53_RS10535	0.62	-0.8
2,354,368	+		LRK53_RS10535	0.62	-2.9
2,354,368	+		LRK53_RS10535	0.62	-0.3
2,354,369	-		LRK53_RS10535	0.62	-0.4
2,354,369	-		LRK53_RS10535	0.62	-1.7
2,354,369	-		LRK53_RS10535	0.62	+0.2
2,354,369	-		LRK53_RS10535	0.62	-0.5
2,354,369	-		LRK53_RS10535	0.62	-1.8
2,354,369	-		LRK53_RS10535	0.62	-1.6
2,354,369	-		LRK53_RS10535	0.62	-0.8
2,354,437	+		LRK53_RS10535	0.68	-0.5
2,354,438	-		LRK53_RS10535	0.68	-1.8
2,354,509	+		LRK53_RS10535	0.74	-1.7
2,354,510	-		LRK53_RS10535	0.74	-1.5
2,354,510	-		LRK53_RS10535	0.74	+0.5
2,354,594	+		LRK53_RS10535	0.81	-0.4
2,354,594	+		LRK53_RS10535	0.81	-0.3
2,354,594	+		LRK53_RS10535	0.81	-1.8
2,354,594	+		LRK53_RS10535	0.81	-0.8
2,354,595	-		LRK53_RS10535	0.81	-0.7
2,354,836	-				-0.7
2,354,847	-				-1.3
2,354,847	-				+0.3
2,354,896	-				-0.7
2,355,036	+		LRK53_RS10540	0.17	-0.4
2,355,036	+		LRK53_RS10540	0.17	+0.6
2,355,036	+		LRK53_RS10540	0.17	+1.4
2,355,036	+		LRK53_RS10540	0.17	-0.4
2,355,036	+		LRK53_RS10540	0.17	-0.9
2,355,036	+		LRK53_RS10540	0.17	-2.0
2,355,036	+		LRK53_RS10540	0.17	-0.8
2,355,037	-		LRK53_RS10540	0.17	-1.0
2,355,037	-		LRK53_RS10540	0.17	+0.4
2,355,037	-		LRK53_RS10540	0.17	-0.3
2,355,037	-		LRK53_RS10540	0.17	-0.1
2,355,037	-		LRK53_RS10540	0.17	-0.8
2,355,037	-		LRK53_RS10540	0.17	+2.3
2,355,037	-		LRK53_RS10540	0.17	-1.3
2,355,037	-		LRK53_RS10540	0.17	-0.3
2,355,037	-		LRK53_RS10540	0.17	-1.1
2,355,037	-		LRK53_RS10540	0.17	-2.0
2,355,336	+		LRK53_RS10540	0.43	-1.9
2,355,336	+		LRK53_RS10540	0.43	-2.2
2,355,336	+		LRK53_RS10540	0.43	-0.5
2,355,336	+		LRK53_RS10540	0.43	-0.6
2,355,336	+		LRK53_RS10540	0.43	-0.8
2,355,337	-		LRK53_RS10540	0.43	-0.3
2,355,337	-		LRK53_RS10540	0.43	-2.4
2,355,337	-		LRK53_RS10540	0.43	-2.1
2,355,337	-		LRK53_RS10540	0.43	-1.7
2,355,337	-		LRK53_RS10540	0.43	-0.4
2,355,337	-		LRK53_RS10540	0.43	-2.4
2,355,566	+		LRK53_RS10540	0.62	-0.5
2,355,575	+		LRK53_RS10540	0.63	-1.3
2,355,575	+		LRK53_RS10540	0.63	-0.0
2,355,575	+		LRK53_RS10540	0.63	-2.3
2,355,576	-		LRK53_RS10540	0.63	+0.1
2,355,579	+		LRK53_RS10540	0.63	-0.7
2,355,579	+		LRK53_RS10540	0.63	-0.1
2,355,579	+		LRK53_RS10540	0.63	+0.6
2,355,579	+		LRK53_RS10540	0.63	-1.4
2,355,579	+		LRK53_RS10540	0.63	-0.8
2,355,579	+		LRK53_RS10540	0.63	-1.3
2,355,580	-		LRK53_RS10540	0.63	-0.8
2,355,580	-		LRK53_RS10540	0.63	-1.7
2,355,580	-		LRK53_RS10540	0.63	-0.3
2,355,580	-		LRK53_RS10540	0.63	-1.8