Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS09455

Experiment: planktonic; Day2; NLDM;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	planktonic; Day2; NLDM;
2,120,485	+				-0.3
2,120,485	+				-1.1
2,120,485	+				-0.4
2,120,485	+				-0.1
2,120,485	+				-0.1
2,120,485	+				-0.8
2,120,485	+				-0.7
2,120,486	-				-1.9
2,120,486	-				-1.2
2,120,552	+				-0.2
2,120,553	-				+0.2
2,120,554	-				-2.6
2,120,586	-				-0.7
2,120,586	-				-0.8
2,120,654	+				-0.7
2,120,654	+				-0.8
2,121,258	+				-1.2
2,121,258	+				-1.4
2,121,259	-				-1.1
2,121,259	-				-0.2
2,121,259	-				-0.3
2,121,259	-				-0.6
2,121,281	+				+0.7
2,121,314	-				-0.9
2,121,314	-				-0.1
2,121,314	-				-1.8
2,121,318	-				-1.3
2,121,318	-				+0.1
2,121,331	+				-0.5
2,121,331	+				+1.2
2,121,332	-				+0.2
2,121,332	-				-2.0
2,121,332	-				-0.9
2,121,332	-				-2.8
2,121,332	-				-2.5
2,121,332	-				-2.4
2,121,332	-				-0.0
2,121,332	-				-0.8
2,121,332	-				-2.1
2,121,400	+				-1.4
2,121,434	-				-1.4
2,121,877	+		LRK53_RS09455	0.36	-0.5
2,121,877	+		LRK53_RS09455	0.36	-1.3
2,121,877	+		LRK53_RS09455	0.36	+0.1
2,121,878	-		LRK53_RS09455	0.36	-0.3
2,121,878	-		LRK53_RS09455	0.36	-0.6
2,121,878	-		LRK53_RS09455	0.36	-1.3
2,121,878	-		LRK53_RS09455	0.36	-1.9
2,122,021	+		LRK53_RS09455	0.47	-1.3
2,122,021	+		LRK53_RS09455	0.47	-1.0
2,122,021	+		LRK53_RS09455	0.47	-2.5
2,122,021	+		LRK53_RS09455	0.47	-1.3
2,122,021	+		LRK53_RS09455	0.47	-1.5
2,122,022	-		LRK53_RS09455	0.47	-0.6
2,122,022	-		LRK53_RS09455	0.47	+0.3
2,122,022	-		LRK53_RS09455	0.47	-2.2
2,122,022	-		LRK53_RS09455	0.47	+0.1
2,122,022	-		LRK53_RS09455	0.47	-0.5
2,122,022	-		LRK53_RS09455	0.47	-1.8
2,122,022	-		LRK53_RS09455	0.47	-2.4
2,122,022	-		LRK53_RS09455	0.47	+2.0
2,122,128	+		LRK53_RS09455	0.55	-1.8
2,122,128	+		LRK53_RS09455	0.55	-0.5
2,122,129	-		LRK53_RS09455	0.55	-0.2
2,122,129	-		LRK53_RS09455	0.55	-1.2
2,122,327	+		LRK53_RS09455	0.70	-1.2
2,122,328	-		LRK53_RS09455	0.71	-1.3
2,122,328	-		LRK53_RS09455	0.71	-1.1
2,122,328	-		LRK53_RS09455	0.71	-2.1
2,122,328	-		LRK53_RS09455	0.71	-1.1
2,122,709	+				+1.0
2,122,709	+				+0.4
2,122,709	+				+1.5
2,122,709	+				-1.0
2,122,709	+				-1.5
2,122,709	+				-1.4
2,122,709	+				+0.8
2,122,709	+				-1.7
2,122,709	+				-0.2
2,122,709	+				-1.8
2,122,710	-				-1.1
2,122,710	-				-1.0
2,122,710	-				-0.3
2,122,710	-				-1.1
2,122,710	-				-1.2
2,122,710	-				-1.8
2,122,710	-				-1.7
2,122,710	-				+0.2
2,122,710	-				-0.7
2,122,710	-				-1.3
2,122,710	-				+1.1
2,122,710	-				-1.0
2,122,710	-				+0.7
2,122,710	-				+0.4
2,122,710	-				-0.2
2,122,710	-				+1.0
2,122,710	-				-2.7
2,122,710	-				-1.5
2,122,727	+				-0.2
2,122,727	+				-0.2
2,122,727	+				-0.2
2,122,728	-				-0.2
2,122,728	-				+0.9
2,122,852	+				+0.2
2,122,878	+				-2.1
2,122,878	+				-0.0
2,122,878	+				-1.3
2,122,879	-				-0.3
2,122,879	-				-0.8
2,122,879	-				+0.5
2,122,879	-				-1.3
2,122,966	+				+0.5
2,122,967	-				+0.5
2,123,008	+		LRK53_RS09460	0.15	-1.1
2,123,008	+		LRK53_RS09460	0.15	-0.7
2,123,008	+		LRK53_RS09460	0.15	-0.3
2,123,009	-		LRK53_RS09460	0.15	-0.5
2,123,009	-		LRK53_RS09460	0.15	-2.0
2,123,009	-		LRK53_RS09460	0.15	-2.9
2,123,009	-		LRK53_RS09460	0.15	-0.3
2,123,009	-		LRK53_RS09460	0.15	-0.2
2,123,009	-		LRK53_RS09460	0.15	-0.7
2,123,407	+		LRK53_RS09460	0.60	+0.5
2,123,407	+		LRK53_RS09460	0.60	+2.0
2,123,581	+		LRK53_RS09460	0.79	+0.1
2,123,581	+		LRK53_RS09460	0.79	-0.6
2,123,581	+		LRK53_RS09460	0.79	-0.0
2,123,581	+		LRK53_RS09460	0.79	-0.9
2,123,581	+		LRK53_RS09460	0.79	-1.0
2,123,582	-		LRK53_RS09460	0.79	+0.7
2,123,652	+		LRK53_RS09460	0.87	-1.1
2,123,653	-		LRK53_RS09460	0.87	-2.0
2,123,698	+				+0.2
2,123,698	+				+1.3
2,123,698	+				-1.0
2,123,699	-				-1.1
2,123,699	-				-0.9
2,123,699	-				-1.0