Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS07080

Experiment: planktonic; Day2; NLDM;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	planktonic; Day2; NLDM;
1,592,376	+		LRK53_RS07070	0.30	+2.3
1,592,376	+		LRK53_RS07070	0.30	-0.3
1,592,377	-		LRK53_RS07070	0.30	-2.7
1,592,472	+		LRK53_RS07070	0.50	+0.3
1,592,472	+		LRK53_RS07070	0.50	-1.4
1,592,472	+		LRK53_RS07070	0.50	-0.3
1,592,472	+		LRK53_RS07070	0.50	-0.4
1,592,472	+		LRK53_RS07070	0.50	-2.6
1,592,472	+		LRK53_RS07070	0.50	+0.2
1,592,472	+		LRK53_RS07070	0.50	-1.5
1,592,472	+		LRK53_RS07070	0.50	+0.3
1,592,472	+		LRK53_RS07070	0.50	-2.2
1,592,472	+		LRK53_RS07070	0.50	-1.4
1,592,472	+		LRK53_RS07070	0.50	-0.0
1,592,472	+		LRK53_RS07070	0.50	-1.9
1,592,472	+		LRK53_RS07070	0.50	-0.4
1,592,472	+		LRK53_RS07070	0.50	-2.7
1,592,472	+		LRK53_RS07070	0.50	-1.9
1,592,472	+		LRK53_RS07070	0.50	-0.4
1,592,472	+		LRK53_RS07070	0.50	+0.4
1,592,472	+		LRK53_RS07070	0.50	+0.1
1,592,472	+		LRK53_RS07070	0.50	-0.1
1,592,472	+		LRK53_RS07070	0.50	-2.1
1,592,472	+		LRK53_RS07070	0.50	-0.2
1,592,472	+		LRK53_RS07070	0.50	-0.9
1,592,472	+		LRK53_RS07070	0.50	-2.0
1,592,472	+		LRK53_RS07070	0.50	+0.3
1,592,472	+		LRK53_RS07070	0.50	-1.3
1,592,472	+		LRK53_RS07070	0.50	+0.8
1,592,473	-		LRK53_RS07070	0.50	-0.3
1,592,473	-		LRK53_RS07070	0.50	-0.1
1,592,473	-		LRK53_RS07070	0.50	-2.1
1,592,473	-		LRK53_RS07070	0.50	-0.6
1,592,473	-		LRK53_RS07070	0.50	-0.7
1,592,473	-		LRK53_RS07070	0.50	-0.8
1,592,473	-		LRK53_RS07070	0.50	-2.3
1,592,473	-		LRK53_RS07070	0.50	+0.7
1,592,473	-		LRK53_RS07070	0.50	-1.2
1,592,473	-		LRK53_RS07070	0.50	-1.5
1,592,473	-		LRK53_RS07070	0.50	-0.9
1,592,473	-		LRK53_RS07070	0.50	+1.0
1,592,473	-		LRK53_RS07070	0.50	-0.2
1,592,473	-		LRK53_RS07070	0.50	+0.7
1,592,473	-		LRK53_RS07070	0.50	-2.3
1,592,473	-		LRK53_RS07070	0.50	-1.5
1,592,473	-		LRK53_RS07070	0.50	-1.5
1,592,473	-		LRK53_RS07070	0.50	-1.3
1,592,473	-		LRK53_RS07070	0.50	-1.0
1,592,473	-		LRK53_RS07070	0.50	+0.3
1,592,473	-		LRK53_RS07070	0.50	+0.8
1,592,473	-		LRK53_RS07070	0.50	-0.6
1,592,473	-		LRK53_RS07070	0.50	-1.9
1,592,473	-		LRK53_RS07070	0.50	-0.6
1,592,473	-		LRK53_RS07070	0.50	-1.8
1,592,473	-		LRK53_RS07070	0.50	+0.6
1,592,473	-		LRK53_RS07070	0.50	-1.8
1,592,473	-		LRK53_RS07070	0.50	+0.5
1,592,473	-		LRK53_RS07070	0.50	-0.7
1,592,505	+		LRK53_RS07070	0.57	-1.9
1,592,505	+		LRK53_RS07070	0.57	-0.1
1,592,506	-		LRK53_RS07070	0.57	+0.8
1,592,506	-		LRK53_RS07070	0.57	-1.4
1,592,506	-		LRK53_RS07070	0.57	-0.9
1,592,740	+				-1.5
1,592,741	-				-0.1
1,592,811	+				+0.1
1,592,811	+				-2.3
1,592,811	+				-0.3
1,592,811	+				-1.2
1,592,811	+				+1.5
1,592,812	-				-1.1
1,592,812	-				-0.7
1,593,314	-				-0.7
1,593,314	-				+0.4
1,593,314	-				+0.1
1,593,332	+				-0.8
1,593,332	+				-1.5
1,593,332	+				-1.7
1,593,332	+				-0.1
1,593,332	+				-0.2
1,593,332	+				+0.3
1,593,333	-				-1.7
1,593,333	-				+0.3
1,593,333	-				-1.5
1,593,333	-				-0.8
1,593,333	-				-1.1
1,593,373	+				-1.5
1,593,373	+				-0.7
1,593,373	+				-0.9
1,593,374	-				-0.2
1,593,374	-				-1.8
1,593,374	-				-1.4
1,593,374	-				-0.9
1,593,374	-				-0.8
1,593,392	+				-1.2
1,593,393	-				-0.8
1,593,393	-				-1.5
1,593,440	+				-1.0
1,593,440	+				-1.1
1,593,440	+				-1.9
1,593,440	+				+0.7
1,593,440	+				-0.6
1,593,440	+				-0.1
1,593,440	+				-1.0
1,593,440	+				-1.6
1,593,440	+				-1.2
1,593,440	+				-1.4
1,593,440	+				-0.1
1,593,440	+				-1.2
1,593,440	+				-2.0
1,593,440	+				-0.8
1,593,440	+				-2.2
1,593,440	+				-0.7
1,593,440	+				-1.4
1,593,440	+				+0.3
1,593,440	+				+1.5
1,593,440	+				-0.7
1,593,440	+				-0.5
1,593,440	+				+0.3
1,593,440	+				-0.7
1,593,440	+				-1.5
1,593,440	+				-1.2
1,593,440	+				-1.8
1,593,440	+				-1.5
1,593,440	+				-2.2
1,593,440	+				+1.3
1,593,440	+				-0.2
1,593,440	+				-2.2
1,593,440	+				+1.1
1,593,441	-				-1.0
1,593,441	-				-0.5
1,593,441	-				-1.7
1,593,441	-				-1.6
1,593,441	-				-1.6
1,593,441	-				-2.4
1,593,441	-				-2.2
1,593,441	-				-0.6
1,593,441	-				-2.0
1,593,441	-				+0.1
1,593,441	-				+1.7
1,593,441	-				-0.6
1,593,441	-				+0.5
1,593,441	-				-1.1
1,593,441	-				-0.2
1,593,441	-				-0.1
1,593,441	-				-1.8
1,593,441	-				-1.7
1,593,441	-				-0.1
1,593,441	-				-1.3
1,593,441	-				-0.2
1,593,441	-				-1.1
1,593,441	-				-1.5
1,593,441	-				-0.5
1,593,441	-				-0.1
1,593,441	-				+0.5
1,593,441	-				+0.3
1,593,441	-				+0.9
1,593,441	-				-0.9
1,593,441	-				-0.5
1,593,441	-				+0.7
1,593,441	-				-2.1
1,593,441	-				-0.7
1,593,441	-				-2.8
1,593,448	+				-0.2
1,593,448	+				-2.6
1,593,448	+				-1.7
1,593,449	-				-0.7
1,593,449	-				-0.6
1,593,449	-				-0.2
1,593,449	-				-0.3
1,593,449	-				-1.1
1,593,497	+				-0.5
1,593,497	+				-1.5
1,593,497	+				-0.4
1,593,497	+				-0.7
1,593,497	+				-1.5
1,593,497	+				-0.7
1,593,497	+				-0.1
1,593,497	+				+0.5
1,593,497	+				-0.9
1,593,497	+				-0.6
1,593,497	+				-2.1
1,593,497	+				+0.7
1,593,497	+				-2.3
1,593,498	-				+1.1
1,593,498	-				-1.4
1,593,498	-				-3.4
1,593,498	-				+0.1
1,593,498	-				-2.0
1,593,498	-				+0.9
1,593,498	-				-0.6
1,593,498	-				+0.9
1,593,498	-				-1.2
1,593,498	-				+0.9
1,593,498	-				-2.8
1,593,498	-				-1.3
1,593,608	+		LRK53_RS07080	0.17	-2.4
1,593,608	+		LRK53_RS07080	0.17	-0.4
1,593,608	+		LRK53_RS07080	0.17	-0.9
1,593,608	+		LRK53_RS07080	0.17	+1.7
1,593,608	+		LRK53_RS07080	0.17	-0.1
1,593,608	+		LRK53_RS07080	0.17	-1.9
1,593,608	+		LRK53_RS07080	0.17	-2.2
1,593,608	+		LRK53_RS07080	0.17	-0.2
1,593,608	+		LRK53_RS07080	0.17	+0.7
1,593,608	+		LRK53_RS07080	0.17	-1.6
1,593,608	+		LRK53_RS07080	0.17	-0.2
1,593,608	+		LRK53_RS07080	0.17	+0.1
1,593,608	+		LRK53_RS07080	0.17	+0.5
1,593,608	+		LRK53_RS07080	0.17	-0.8
1,593,608	+		LRK53_RS07080	0.17	-2.7
1,593,608	+		LRK53_RS07080	0.17	-0.5
1,593,608	+		LRK53_RS07080	0.17	-0.9
1,593,608	+		LRK53_RS07080	0.17	-2.8
1,593,608	+		LRK53_RS07080	0.17	+0.8
1,593,608	+		LRK53_RS07080	0.17	-1.5
1,593,608	+		LRK53_RS07080	0.17	-2.2
1,593,608	+		LRK53_RS07080	0.17	+0.3
1,593,608	+		LRK53_RS07080	0.17	-2.3
1,593,608	+		LRK53_RS07080	0.17	-0.8
1,593,608	+		LRK53_RS07080	0.17	+0.7
1,593,608	+		LRK53_RS07080	0.17	-0.3
1,593,608	+		LRK53_RS07080	0.17	-1.8
1,593,608	+		LRK53_RS07080	0.17	-1.4
1,593,608	+		LRK53_RS07080	0.17	+1.0
1,593,608	+		LRK53_RS07080	0.17	-1.5
1,593,608	+		LRK53_RS07080	0.17	-1.4
1,593,608	+		LRK53_RS07080	0.17	-1.6
1,593,608	+		LRK53_RS07080	0.17	-0.9
1,593,608	+		LRK53_RS07080	0.17	-0.0
1,593,608	+		LRK53_RS07080	0.17	-0.6
1,593,608	+		LRK53_RS07080	0.17	-1.1
1,593,608	+		LRK53_RS07080	0.17	-0.3
1,593,608	+		LRK53_RS07080	0.17	-1.8
1,593,608	+		LRK53_RS07080	0.17	+2.1
1,593,608	+		LRK53_RS07080	0.17	-0.9
1,593,608	+		LRK53_RS07080	0.17	-0.3
1,593,608	+		LRK53_RS07080	0.17	-0.3
1,593,608	+		LRK53_RS07080	0.17	-2.2
1,593,608	+		LRK53_RS07080	0.17	-0.4
1,593,608	+		LRK53_RS07080	0.17	-1.4
1,593,608	+		LRK53_RS07080	0.17	-0.2
1,593,608	+		LRK53_RS07080	0.17	-1.7
1,593,609	-		LRK53_RS07080	0.17	-1.7
1,593,609	-		LRK53_RS07080	0.17	+0.5
1,593,609	-		LRK53_RS07080	0.17	-1.7
1,593,609	-		LRK53_RS07080	0.17	+0.5
1,593,609	-		LRK53_RS07080	0.17	-0.3
1,593,609	-		LRK53_RS07080	0.17	-2.8
1,593,609	-		LRK53_RS07080	0.17	-1.3
1,593,609	-		LRK53_RS07080	0.17	+0.7
1,593,609	-		LRK53_RS07080	0.17	-1.2
1,593,609	-		LRK53_RS07080	0.17	-1.3
1,593,609	-		LRK53_RS07080	0.17	-1.1
1,593,609	-		LRK53_RS07080	0.17	-1.5
1,593,609	-		LRK53_RS07080	0.17	-0.7
1,593,609	-		LRK53_RS07080	0.17	-0.9
1,593,609	-		LRK53_RS07080	0.17	-0.2
1,593,609	-		LRK53_RS07080	0.17	-0.1
1,593,609	-		LRK53_RS07080	0.17	-0.7
1,593,609	-		LRK53_RS07080	0.17	-1.1
1,593,609	-		LRK53_RS07080	0.17	+0.2
1,593,609	-		LRK53_RS07080	0.17	-2.1
1,593,609	-		LRK53_RS07080	0.17	-1.0
1,593,609	-		LRK53_RS07080	0.17	-0.3
1,593,609	-		LRK53_RS07080	0.17	-2.8
1,593,609	-		LRK53_RS07080	0.17	+1.7
1,593,609	-		LRK53_RS07080	0.17	-1.8
1,593,609	-		LRK53_RS07080	0.17	-1.8
1,593,609	-		LRK53_RS07080	0.17	-1.2
1,593,609	-		LRK53_RS07080	0.17	-0.8
1,593,609	-		LRK53_RS07080	0.17	+0.4
1,593,609	-		LRK53_RS07080	0.17	-0.3
1,593,609	-		LRK53_RS07080	0.17	+0.1
1,593,609	-		LRK53_RS07080	0.17	-1.1
1,593,609	-		LRK53_RS07080	0.17	-0.3
1,593,609	-		LRK53_RS07080	0.17	-1.5
1,593,609	-		LRK53_RS07080	0.17	-1.4
1,593,609	-		LRK53_RS07080	0.17	-2.8
1,593,609	-		LRK53_RS07080	0.17	-1.3
1,593,609	-		LRK53_RS07080	0.17	+0.3
1,593,609	-		LRK53_RS07080	0.17	-0.6
1,593,610	+		LRK53_RS07080	0.17	-1.2
1,593,611	-		LRK53_RS07080	0.17	+0.8
1,593,611	-		LRK53_RS07080	0.17	-2.0
1,593,611	-		LRK53_RS07080	0.17	+0.5
1,593,611	-		LRK53_RS07080	0.17	-1.3
1,593,650	+		LRK53_RS07080	0.20	-0.2
1,593,650	+		LRK53_RS07080	0.20	+0.2
1,593,650	+		LRK53_RS07080	0.20	-0.8
1,593,650	+		LRK53_RS07080	0.20	-1.3
1,593,650	+		LRK53_RS07080	0.20	+0.3
1,593,650	+		LRK53_RS07080	0.20	-0.6
1,593,650	+		LRK53_RS07080	0.20	-0.5
1,593,650	+		LRK53_RS07080	0.20	-0.2
1,593,650	+		LRK53_RS07080	0.20	-2.8
1,593,650	+		LRK53_RS07080	0.20	-1.2
1,593,650	+		LRK53_RS07080	0.20	-1.5
1,593,651	-		LRK53_RS07080	0.20	-0.5
1,593,651	-		LRK53_RS07080	0.20	-0.8
1,593,651	-		LRK53_RS07080	0.20	-3.3
1,593,651	-		LRK53_RS07080	0.20	-0.3
1,593,651	-		LRK53_RS07080	0.20	-0.5
1,593,651	-		LRK53_RS07080	0.20	-1.3
1,593,651	-		LRK53_RS07080	0.20	+1.7
1,593,651	-		LRK53_RS07080	0.20	-1.4
1,593,651	-		LRK53_RS07080	0.20	-0.8
1,593,651	-		LRK53_RS07080	0.20	-1.3
1,593,651	-		LRK53_RS07080	0.20	-0.8
1,593,651	-		LRK53_RS07080	0.20	-1.0
1,593,651	-		LRK53_RS07080	0.20	-0.8
1,593,651	-		LRK53_RS07080	0.20	-1.0
1,593,737	+		LRK53_RS07080	0.26	-0.9
1,593,738	-		LRK53_RS07080	0.26	-2.1
1,593,738	-		LRK53_RS07080	0.26	-0.6
1,593,738	-		LRK53_RS07080	0.26	+1.7
1,593,738	-		LRK53_RS07080	0.26	-2.9
1,593,738	-		LRK53_RS07080	0.26	-0.2
1,593,738	-		LRK53_RS07080	0.26	-1.6
1,593,738	-		LRK53_RS07080	0.26	-0.5
1,593,869	+		LRK53_RS07080	0.35	-1.2
1,593,869	+		LRK53_RS07080	0.35	-1.1
1,593,869	+		LRK53_RS07080	0.35	+1.2
1,593,869	+		LRK53_RS07080	0.35	+1.1
1,593,869	+		LRK53_RS07080	0.35	-0.6
1,593,869	+		LRK53_RS07080	0.35	-0.6
1,593,869	+		LRK53_RS07080	0.35	-0.1
1,593,869	+		LRK53_RS07080	0.35	-1.5
1,593,869	+		LRK53_RS07080	0.35	+0.2
1,593,869	+		LRK53_RS07080	0.35	+0.3
1,593,870	-		LRK53_RS07080	0.35	-1.9
1,593,870	-		LRK53_RS07080	0.35	-0.2
1,593,870	-		LRK53_RS07080	0.35	-1.1
1,593,870	-		LRK53_RS07080	0.35	-1.0
1,593,870	-		LRK53_RS07080	0.35	-2.2
1,593,870	-		LRK53_RS07080	0.35	-0.3
1,593,870	-		LRK53_RS07080	0.35	-2.7
1,593,870	-		LRK53_RS07080	0.35	-0.2
1,593,870	-		LRK53_RS07080	0.35	-0.5
1,593,870	-		LRK53_RS07080	0.35	-2.0
1,593,870	-		LRK53_RS07080	0.35	-1.7
1,593,884	+		LRK53_RS07080	0.36	-0.2
1,593,884	+		LRK53_RS07080	0.36	+0.1
1,593,884	+		LRK53_RS07080	0.36	-0.6
1,593,884	+		LRK53_RS07080	0.36	-2.0
1,593,884	+		LRK53_RS07080	0.36	-1.5
1,593,884	+		LRK53_RS07080	0.36	-0.2
1,593,884	+		LRK53_RS07080	0.36	-1.3
1,593,884	+		LRK53_RS07080	0.36	-0.0
1,593,884	+		LRK53_RS07080	0.36	-0.5
1,593,885	-		LRK53_RS07080	0.36	-1.3
1,593,885	-		LRK53_RS07080	0.36	-2.2
1,593,885	-		LRK53_RS07080	0.36	-1.7
1,593,956	+		LRK53_RS07080	0.41	-1.3
1,593,956	+		LRK53_RS07080	0.41	-2.2
1,593,956	+		LRK53_RS07080	0.41	-2.5
1,593,956	+		LRK53_RS07080	0.41	-0.8
1,593,956	+		LRK53_RS07080	0.41	-1.1
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1,593,956	+		LRK53_RS07080	0.41	+2.4
1,593,956	+		LRK53_RS07080	0.41	-1.7
1,593,956	+		LRK53_RS07080	0.41	-2.3
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1,594,145	+		LRK53_RS07080	0.55	-2.4
1,594,145	+		LRK53_RS07080	0.55	+0.2
1,594,145	+		LRK53_RS07080	0.55	-2.0
1,594,145	+		LRK53_RS07080	0.55	-2.1
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1,594,145	+		LRK53_RS07080	0.55	-1.7
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1,594,145	+		LRK53_RS07080	0.55	-1.3
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1,594,145	+		LRK53_RS07080	0.55	-3.0
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1,594,145	+		LRK53_RS07080	0.55	-0.3
1,594,145	+		LRK53_RS07080	0.55	-2.1
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1,594,145	+		LRK53_RS07080	0.55	-1.1
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1,594,145	+		LRK53_RS07080	0.55	-1.8
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1,594,146	-		LRK53_RS07080	0.55	-1.3
1,594,146	-		LRK53_RS07080	0.55	-1.1
1,594,146	-		LRK53_RS07080	0.55	-2.4
1,594,146	-		LRK53_RS07080	0.55	-1.2
1,594,146	-		LRK53_RS07080	0.55	-3.0
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1,594,146	-		LRK53_RS07080	0.55	-1.3
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1,594,146	-		LRK53_RS07080	0.55	-1.1
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1,594,146	-		LRK53_RS07080	0.55	-1.8
1,594,146	-		LRK53_RS07080	0.55	-3.2
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1,594,146	-		LRK53_RS07080	0.55	+0.5
1,594,146	-		LRK53_RS07080	0.55	-2.1
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1,594,214	+		LRK53_RS07080	0.59	-0.2
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1,594,214	+		LRK53_RS07080	0.59	-1.3
1,594,214	+		LRK53_RS07080	0.59	-2.1
1,594,214	+		LRK53_RS07080	0.59	-3.0
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1,594,214	+		LRK53_RS07080	0.59	-2.2
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1,594,214	+		LRK53_RS07080	0.59	+0.1
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1,594,214	+		LRK53_RS07080	0.59	-1.7
1,594,214	+		LRK53_RS07080	0.59	-1.6
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1,594,215	-		LRK53_RS07080	0.59	-2.3
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1,594,215	-		LRK53_RS07080	0.59	-1.1
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1,594,586	+		LRK53_RS07080	0.85	-1.0
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1,594,586	+		LRK53_RS07080	0.85	-2.4
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1,594,586	+		LRK53_RS07080	0.85	-1.1
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1,594,586	+		LRK53_RS07080	0.85	-2.6
1,594,586	+		LRK53_RS07080	0.85	-0.7
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1,594,586	+		LRK53_RS07080	0.85	-1.8
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1,594,586	+		LRK53_RS07080	0.85	-0.1
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1,594,586	+		LRK53_RS07080	0.85	-1.1
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1,594,586	+		LRK53_RS07080	0.85	+0.1
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1,594,586	+		LRK53_RS07080	0.85	-0.2
1,594,586	+		LRK53_RS07080	0.85	+3.1
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1,594,587	-		LRK53_RS07080	0.86	-1.3
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1,594,587	-		LRK53_RS07080	0.86	-0.1
1,594,587	-		LRK53_RS07080	0.86	-0.1
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1,594,587	-		LRK53_RS07080	0.86	-1.2
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1,594,587	-		LRK53_RS07080	0.86	-1.7
1,594,587	-		LRK53_RS07080	0.86	-0.4
1,594,587	-		LRK53_RS07080	0.86	+0.1
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1,594,931	+				-0.8
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1,595,370	-		LRK53_RS07085	0.56	+0.1
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1,595,660	+				-1.0
1,595,660	+				-0.7
1,595,660	+				-3.4
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1,595,660	+				+0.3
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1,595,660	+				-1.2
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1,595,660	+				-1.5
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1,595,684	-				-2.5
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