Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS06580

Experiment: planktonic; Day2; NLDM;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	planktonic; Day2; NLDM;
1,490,696	+				+0.7
1,490,696	+				+1.1
1,490,697	-				+1.5
1,490,697	-				-0.2
1,490,697	-				-1.0
1,490,766	+		LRK53_RS06570	0.11	-1.4
1,490,817	-		LRK53_RS06570	0.20	+0.4
1,491,431	-		LRK53_RS06575	0.56	-0.8
1,491,431	-		LRK53_RS06575	0.56	-2.5
1,491,442	+		LRK53_RS06575	0.60	-0.9
1,491,442	+		LRK53_RS06575	0.60	-1.8
1,491,443	-		LRK53_RS06575	0.60	-0.2
1,491,443	-		LRK53_RS06575	0.60	-0.5
1,491,443	-		LRK53_RS06575	0.60	-1.0
1,491,443	-		LRK53_RS06575	0.60	-0.7
1,491,483	-		LRK53_RS06575	0.76	-1.5
1,491,483	-		LRK53_RS06575	0.76	-0.5
1,491,511	+		LRK53_RS06575	0.87	+0.0
1,491,511	+		LRK53_RS06575	0.87	-1.3
1,491,511	+		LRK53_RS06575	0.87	-1.1
1,491,511	+		LRK53_RS06575	0.87	-1.3
1,491,511	+		LRK53_RS06575	0.87	-3.5
1,491,511	+		LRK53_RS06575	0.87	-1.1
1,491,511	+		LRK53_RS06575	0.87	-0.8
1,491,512	-		LRK53_RS06575	0.88	-0.8
1,491,512	-		LRK53_RS06575	0.88	-0.7
1,491,512	-		LRK53_RS06575	0.88	+0.0
1,491,512	-		LRK53_RS06575	0.88	+0.1
1,491,512	-		LRK53_RS06575	0.88	-0.8
1,491,512	-		LRK53_RS06575	0.88	-1.4
1,491,512	-		LRK53_RS06575	0.88	-1.4
1,491,520	+				-2.1
1,491,520	+				-0.3
1,491,520	+				-0.1
1,491,520	+				-0.8
1,491,520	+				+0.2
1,491,520	+				+1.1
1,491,520	+				+0.6
1,491,520	+				-1.0
1,491,520	+				-0.6
1,491,520	+				+1.5
1,491,520	+				-0.3
1,491,520	+				-0.4
1,491,520	+				-3.1
1,491,520	+				+0.2
1,491,521	-				-0.9
1,491,521	-				-2.4
1,491,521	-				+0.5
1,491,521	-				-0.3
1,491,521	-				-1.2
1,491,521	-				-1.1
1,491,521	-				-0.9
1,491,521	-				-1.6
1,491,521	-				-2.3
1,491,521	-				-2.2
1,491,521	-				-1.1
1,491,521	-				-1.4
1,491,521	-				+1.5
1,491,521	-				-1.2
1,491,521	-				+0.3
1,491,521	-				-2.2
1,491,521	-				-0.1
1,491,521	-				-0.2
1,491,521	-				-1.4
1,491,521	-				-1.6
1,491,521	-				-2.1
1,491,521	-				-0.7
1,491,521	-				-1.1
1,491,533	+				+0.8
1,491,533	+				-1.6
1,491,533	+				-0.8
1,491,533	+				-0.1
1,491,534	-				-1.5
1,491,534	-				-0.7
1,491,608	+				-0.7
1,491,609	-				-0.5
1,491,609	-				-1.8
1,491,609	-				+0.1
1,491,613	+				-1.3
1,491,614	-				-1.9
1,491,614	-				+0.4
1,491,614	-				-0.7
1,491,621	+				-1.5
1,491,621	+				+0.4
1,491,621	+				-1.5
1,491,621	+				-1.8
1,491,621	+				-1.1
1,491,621	+				-1.0
1,491,621	+				+0.6
1,491,621	+				+0.9
1,491,621	+				+0.9
1,491,621	+				-3.1
1,491,621	+				+0.9
1,491,621	+				+0.3
1,491,621	+				-0.5
1,491,621	+				-1.7
1,491,621	+				-0.6
1,491,621	+				-1.0
1,491,621	+				-1.1
1,491,621	+				-0.9
1,491,622	-				-1.1
1,491,622	-				-1.7
1,491,622	-				-0.4
1,491,622	-				-1.0
1,491,622	-				-0.2
1,491,622	-				-0.9
1,491,622	-				-2.4
1,491,622	-				+0.1
1,491,622	-				-1.2
1,491,622	-				-0.3
1,491,622	-				-0.6
1,491,622	-				-1.5
1,491,622	-				-0.7
1,491,623	+				-1.7
1,491,856	+		LRK53_RS06580	0.16	-0.6
1,491,856	+		LRK53_RS06580	0.16	-0.8
1,491,856	+		LRK53_RS06580	0.16	-0.9
1,491,856	+		LRK53_RS06580	0.16	+0.6
1,491,857	-		LRK53_RS06580	0.16	-2.3
1,491,857	-		LRK53_RS06580	0.16	-0.7
1,491,857	-		LRK53_RS06580	0.16	+1.1
1,491,857	-		LRK53_RS06580	0.16	-1.5
1,491,857	-		LRK53_RS06580	0.16	-1.0
1,491,857	-		LRK53_RS06580	0.16	-0.9
1,491,857	-		LRK53_RS06580	0.16	+0.0
1,491,949	+		LRK53_RS06580	0.22	-1.4
1,492,156	+		LRK53_RS06580	0.38	-0.4
1,492,156	+		LRK53_RS06580	0.38	-0.4
1,492,156	+		LRK53_RS06580	0.38	+0.3
1,492,255	+		LRK53_RS06580	0.45	-0.4
1,492,255	+		LRK53_RS06580	0.45	-0.1
1,492,255	+		LRK53_RS06580	0.45	-0.5
1,492,255	+		LRK53_RS06580	0.45	-2.1
1,492,256	-		LRK53_RS06580	0.45	-1.3
1,492,256	-		LRK53_RS06580	0.45	-2.1
1,492,261	+		LRK53_RS06580	0.45	-2.2
1,492,261	+		LRK53_RS06580	0.45	-0.4
1,492,262	-		LRK53_RS06580	0.45	-0.5
1,492,451	-		LRK53_RS06580	0.59	-1.3
1,492,621	+		LRK53_RS06580	0.71	-0.7
1,492,621	+		LRK53_RS06580	0.71	-0.5
1,492,621	+		LRK53_RS06580	0.71	-2.1
1,492,621	+		LRK53_RS06580	0.71	-0.6
1,492,621	+		LRK53_RS06580	0.71	-2.0
1,492,622	-		LRK53_RS06580	0.72	-1.4
1,492,622	-		LRK53_RS06580	0.72	-0.4
1,492,622	-		LRK53_RS06580	0.72	+0.3
1,492,636	+		LRK53_RS06580	0.73	+0.1
1,492,637	-		LRK53_RS06580	0.73	-0.2
1,492,637	-		LRK53_RS06580	0.73	+0.3
1,492,728	+		LRK53_RS06580	0.79	-1.2
1,492,728	+		LRK53_RS06580	0.79	-0.7
1,492,819	+		LRK53_RS06580	0.86	+0.8
1,492,819	+		LRK53_RS06580	0.86	-2.7
1,492,820	-		LRK53_RS06580	0.86	+0.5
1,493,009	-				-0.5
1,493,117	+				-2.0
1,493,117	+				-3.6
1,493,168	+		LRK53_RS06585	0.17	-1.1
1,493,168	+		LRK53_RS06585	0.17	+0.1
1,493,168	+		LRK53_RS06585	0.17	+0.1
1,493,168	+		LRK53_RS06585	0.17	-0.7
1,493,168	+		LRK53_RS06585	0.17	-1.8
1,493,168	+		LRK53_RS06585	0.17	-2.0
1,493,169	-		LRK53_RS06585	0.17	-0.1
1,493,169	-		LRK53_RS06585	0.17	-0.1
1,493,169	-		LRK53_RS06585	0.17	+0.2
1,493,169	-		LRK53_RS06585	0.17	-0.9
1,493,359	+		LRK53_RS06585	0.59	+0.0
1,493,483	+		LRK53_RS06585	0.86	-0.9
1,493,483	+		LRK53_RS06585	0.86	+1.2
1,493,483	+		LRK53_RS06585	0.86	-0.2
1,493,483	+		LRK53_RS06585	0.86	-3.8
1,493,483	+		LRK53_RS06585	0.86	+1.3
1,493,484	-		LRK53_RS06585	0.86	-0.9
1,493,484	-		LRK53_RS06585	0.86	+0.5
1,493,484	-		LRK53_RS06585	0.86	-1.0
1,493,484	-		LRK53_RS06585	0.86	-0.4
1,493,598	+				-0.8
1,493,617	-				-2.5
1,493,617	-				-0.8
1,493,617	-				-0.1
1,493,617	-				+2.3
1,493,617	-				-1.7
1,493,617	-				-0.6
1,493,617	-				+0.3
1,493,617	-				-0.9
1,493,617	-				-0.1
1,493,617	-				-0.7
1,493,617	-				+0.1
1,493,617	-				-1.3
1,493,617	-				-1.8
1,493,617	-				-0.4
1,493,617	-				-0.8
1,493,617	-				-0.1
1,493,617	-				+0.3
1,493,617	-				-0.5
1,493,617	-				-0.9
1,493,617	-				+1.1
1,493,617	-				-1.1
1,493,617	-				+0.5
1,493,617	-				-1.2