Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS05830

Experiment: planktonic; Day2; NLDM;

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	planktonic; Day2; NLDM;
1,352,405	+				-2.1
1,352,405	+				-1.5
1,352,405	+				-1.3
1,353,179	+				-0.4
1,353,179	+				-1.7
1,353,179	+				-2.3
1,353,180	-				-1.4
1,353,180	-				-1.4
1,353,180	-				-1.7
1,353,180	-				+1.5
1,353,366	+		LRK53_RS05830	0.24	-0.8
1,353,367	-		LRK53_RS05830	0.24	-0.2
1,353,367	-		LRK53_RS05830	0.24	-2.4
1,353,473	-		LRK53_RS05830	0.41	-0.6
1,353,473	-		LRK53_RS05830	0.41	+0.0
1,353,628	+		LRK53_RS05830	0.67	-0.4
1,353,628	+		LRK53_RS05830	0.67	-0.5
1,353,629	-		LRK53_RS05830	0.67	+0.5
1,353,629	-		LRK53_RS05830	0.67	-0.9
1,353,664	+		LRK53_RS05830	0.73	-0.6
1,353,664	+		LRK53_RS05830	0.73	-1.9
1,353,664	+		LRK53_RS05830	0.73	-2.7
1,353,664	+		LRK53_RS05830	0.73	-1.7
1,353,800	+				-1.6
1,353,800	+				-2.3
1,353,800	+				-0.6
1,353,801	-				-0.5
1,353,801	-				-1.5
1,353,905	+				-0.4
1,353,905	+				-1.8
1,353,905	+				+0.1
1,353,905	+				-0.1
1,353,905	+				-1.8
1,353,905	+				-0.0
1,353,905	+				+0.1
1,353,905	+				+0.1
1,353,905	+				-2.3
1,353,906	-				+0.3
1,353,906	-				-1.4
1,353,906	-				+1.0
1,353,906	-				-0.7
1,353,906	-				-1.5
1,353,906	-				+0.1
1,353,906	-				+0.5
1,353,906	-				-0.2
1,353,923	+				-0.8
1,353,923	+				-1.6
1,353,923	+				-2.3
1,353,923	+				-0.5
1,353,923	+				-0.8
1,353,923	+				-2.1
1,353,923	+				-0.5
1,353,923	+				-2.6
1,353,923	+				-1.1
1,353,923	+				-0.6
1,353,923	+				-1.6
1,353,923	+				+2.1
1,353,923	+				+0.5
1,353,923	+				-1.5
1,353,923	+				-0.2
1,353,923	+				-0.7
1,353,923	+				-1.5
1,353,923	+				+0.1
1,353,924	-				+1.9
1,353,924	-				-2.3
1,353,924	-				-1.8
1,353,924	-				-0.4
1,353,924	-				-3.0
1,353,924	-				-1.2
1,353,938	+				-0.8
1,353,938	+				-0.8
1,353,938	+				+2.1
1,353,938	+				-1.6
1,353,938	+				-1.8
1,353,938	+				-1.2
1,353,938	+				+1.3
1,353,938	+				-0.9
1,353,938	+				-1.8
1,353,938	+				+0.1
1,353,938	+				-1.0
1,353,938	+				-1.7
1,353,938	+				-1.3
1,353,938	+				+1.6
1,353,938	+				-0.3
1,353,938	+				-2.7
1,353,938	+				-0.5
1,353,938	+				-0.6
1,353,938	+				-1.5
1,353,938	+				-0.2
1,353,938	+				-0.9
1,353,938	+				-1.0
1,353,938	+				-0.8
1,353,938	+				-1.2
1,353,938	+				+0.4
1,353,938	+				+0.5
1,353,938	+				-0.1
1,353,938	+				-1.1
1,353,938	+				-0.1
1,353,938	+				-0.5
1,353,938	+				+1.9
1,353,938	+				-0.6
1,353,938	+				-0.4
1,353,938	+				-0.9
1,353,938	+				-2.2
1,353,938	+				+0.3
1,353,938	+				-1.9
1,353,938	+				-1.6
1,353,938	+				-1.5
1,353,938	+				-2.7
1,353,939	-				-1.1
1,353,939	-				-0.4
1,353,939	-				-3.5
1,353,939	-				-0.6
1,353,939	-				-1.2
1,353,939	-				+0.1
1,353,939	-				-0.6
1,353,939	-				-0.8
1,353,939	-				-0.8
1,353,939	-				+0.5
1,353,939	-				-1.3
1,353,939	-				-2.8
1,353,939	-				-2.2
1,353,939	-				-0.3
1,353,939	-				-0.6
1,353,939	-				-1.7
1,353,939	-				-1.0
1,353,939	-				-1.3
1,353,939	-				-0.2
1,353,939	-				-3.0
1,353,939	-				-2.3
1,353,939	-				-0.1
1,353,939	-				-0.3
1,353,939	-				-0.1
1,353,939	-				-0.7
1,353,939	-				-0.9
1,353,939	-				+1.3
1,353,939	-				-2.4
1,353,939	-				-1.1
1,353,939	-				+1.1
1,353,939	-				-1.8
1,353,939	-				-1.0
1,353,939	-				-1.3
1,353,939	-				-0.4
1,353,939	-				-0.6
1,354,027	+		LRK53_RS05835	0.13	-1.7
1,354,039	+		LRK53_RS05835	0.15	-1.5
1,354,039	+		LRK53_RS05835	0.15	+1.5
1,354,039	+		LRK53_RS05835	0.15	+1.4
1,354,040	-		LRK53_RS05835	0.15	-1.7
1,354,040	-		LRK53_RS05835	0.15	-1.2
1,354,087	+		LRK53_RS05835	0.21	-0.5
1,354,087	+		LRK53_RS05835	0.21	-0.4
1,354,087	+		LRK53_RS05835	0.21	-0.9
1,354,087	+		LRK53_RS05835	0.21	-1.1
1,354,087	+		LRK53_RS05835	0.21	-0.4
1,354,087	+		LRK53_RS05835	0.21	-1.4
1,354,087	+		LRK53_RS05835	0.21	-0.8
1,354,087	+		LRK53_RS05835	0.21	-3.3
1,354,087	+		LRK53_RS05835	0.21	-0.4
1,354,087	+		LRK53_RS05835	0.21	-0.6
1,354,087	+		LRK53_RS05835	0.21	-0.9
1,354,087	+		LRK53_RS05835	0.21	+1.5
1,354,087	+		LRK53_RS05835	0.21	-0.4
1,354,087	+		LRK53_RS05835	0.21	-0.0
1,354,087	+		LRK53_RS05835	0.21	-1.0
1,354,087	+		LRK53_RS05835	0.21	-1.1
1,354,087	+		LRK53_RS05835	0.21	+0.8
1,354,087	+		LRK53_RS05835	0.21	-1.8
1,354,087	+		LRK53_RS05835	0.21	-1.9
1,354,087	+		LRK53_RS05835	0.21	-0.4
1,354,087	+		LRK53_RS05835	0.21	-1.4
1,354,087	+		LRK53_RS05835	0.21	-0.8
1,354,087	+		LRK53_RS05835	0.21	+0.3
1,354,087	+		LRK53_RS05835	0.21	-3.1
1,354,087	+		LRK53_RS05835	0.21	-0.4
1,354,087	+		LRK53_RS05835	0.21	-1.7
1,354,088	-		LRK53_RS05835	0.21	-0.1
1,354,088	-		LRK53_RS05835	0.21	-0.8
1,354,088	-		LRK53_RS05835	0.21	-1.8
1,354,088	-		LRK53_RS05835	0.21	-0.4
1,354,088	-		LRK53_RS05835	0.21	-1.7
1,354,088	-		LRK53_RS05835	0.21	-1.5
1,354,088	-		LRK53_RS05835	0.21	-0.7
1,354,088	-		LRK53_RS05835	0.21	-0.8
1,354,088	-		LRK53_RS05835	0.21	-1.2
1,354,088	-		LRK53_RS05835	0.21	-1.4
1,354,088	-		LRK53_RS05835	0.21	+0.1
1,354,088	-		LRK53_RS05835	0.21	-0.0
1,354,088	-		LRK53_RS05835	0.21	-0.1
1,354,088	-		LRK53_RS05835	0.21	-0.9
1,354,088	-		LRK53_RS05835	0.21	-1.4
1,354,088	-		LRK53_RS05835	0.21	+0.1
1,354,088	-		LRK53_RS05835	0.21	-0.8
1,354,088	-		LRK53_RS05835	0.21	-3.2
1,354,088	-		LRK53_RS05835	0.21	-2.1
1,354,088	-		LRK53_RS05835	0.21	-0.4
1,354,088	-		LRK53_RS05835	0.21	+0.0
1,354,088	-		LRK53_RS05835	0.21	-2.9
1,354,088	-		LRK53_RS05835	0.21	-3.3
1,354,088	-		LRK53_RS05835	0.21	-1.7
1,354,088	-		LRK53_RS05835	0.21	-1.4
1,354,249	+		LRK53_RS05835	0.43	+1.9
1,354,249	+		LRK53_RS05835	0.43	-1.2
1,354,249	+		LRK53_RS05835	0.43	-0.0
1,354,250	-		LRK53_RS05835	0.44	+1.2
1,354,250	-		LRK53_RS05835	0.44	-1.1
1,354,250	-		LRK53_RS05835	0.44	-3.6
1,354,410	-		LRK53_RS05835	0.65	+0.0
1,354,503	+		LRK53_RS05835	0.78	-1.4
1,354,503	+		LRK53_RS05835	0.78	-1.3
1,354,503	+		LRK53_RS05835	0.78	-0.1
1,354,503	+		LRK53_RS05835	0.78	+0.8
1,354,503	+		LRK53_RS05835	0.78	+1.2
1,354,503	+		LRK53_RS05835	0.78	-1.6
1,354,503	+		LRK53_RS05835	0.78	-1.5
1,354,503	+		LRK53_RS05835	0.78	-2.7
1,354,504	-		LRK53_RS05835	0.78	-1.4
1,354,504	-		LRK53_RS05835	0.78	+1.6
1,354,504	-		LRK53_RS05835	0.78	-2.5
1,354,504	-		LRK53_RS05835	0.78	-1.3
1,354,504	-		LRK53_RS05835	0.78	+1.3
1,354,504	-		LRK53_RS05835	0.78	-0.7
1,354,504	-		LRK53_RS05835	0.78	-1.2
1,354,504	-		LRK53_RS05835	0.78	-1.0
1,354,504	-		LRK53_RS05835	0.78	-0.0
1,354,504	-		LRK53_RS05835	0.78	-0.2
1,354,504	-		LRK53_RS05835	0.78	-0.6
1,354,504	-		LRK53_RS05835	0.78	+0.1
1,354,540	+		LRK53_RS05835	0.83	-1.1
1,354,540	+		LRK53_RS05835	0.83	-0.7
1,354,540	+		LRK53_RS05835	0.83	-1.5
1,354,540	+		LRK53_RS05835	0.83	-0.1
1,354,540	+		LRK53_RS05835	0.83	-1.4
1,354,540	+		LRK53_RS05835	0.83	-1.0
1,354,540	+		LRK53_RS05835	0.83	+0.8
1,354,540	+		LRK53_RS05835	0.83	+0.8
1,354,540	+		LRK53_RS05835	0.83	-1.3
1,354,540	+		LRK53_RS05835	0.83	-0.9
1,354,541	-		LRK53_RS05835	0.83	-1.1
1,354,541	-		LRK53_RS05835	0.83	+0.5
1,354,541	-		LRK53_RS05835	0.83	-1.0
1,354,541	-		LRK53_RS05835	0.83	+0.9
1,354,541	-		LRK53_RS05835	0.83	-1.2
1,354,541	-		LRK53_RS05835	0.83	-1.3
1,354,541	-		LRK53_RS05835	0.83	-1.3
1,354,541	-		LRK53_RS05835	0.83	-0.1
1,354,541	-		LRK53_RS05835	0.83	-1.2
1,354,586	+		LRK53_RS05835	0.89	-0.4
1,354,586	+		LRK53_RS05835	0.89	+0.8
1,354,586	+		LRK53_RS05835	0.89	+0.7
1,354,586	+		LRK53_RS05835	0.89	+0.1
1,354,586	+		LRK53_RS05835	0.89	+1.3
1,354,586	+		LRK53_RS05835	0.89	-0.9
1,354,586	+		LRK53_RS05835	0.89	-1.5
1,354,586	+		LRK53_RS05835	0.89	-0.9
1,354,587	-		LRK53_RS05835	0.90	-1.3
1,354,587	-		LRK53_RS05835	0.90	-1.5
1,354,587	-		LRK53_RS05835	0.90	+0.3
1,354,587	-		LRK53_RS05835	0.90	-0.7
1,354,686	+				-2.5
1,354,686	+				-1.5
1,354,686	+				-2.3
1,354,686	+				-2.1
1,354,687	-				-0.4
1,354,687	-				-0.1
1,354,687	-				-1.9
1,354,700	+				+1.1
1,354,700	+				-1.6
1,354,700	+				-1.4
1,354,700	+				-0.1
1,354,700	+				-1.5
1,354,700	+				-2.0
1,354,701	-				+0.5
1,354,701	-				-2.0
1,354,701	-				-1.3
1,354,701	-				-1.8
1,354,701	-				+0.4
1,354,816	+		LRK53_RS05840	0.11	-1.1
1,354,816	+		LRK53_RS05840	0.11	-0.5
1,354,816	+		LRK53_RS05840	0.11	+1.0
1,354,816	+		LRK53_RS05840	0.11	-0.2
1,354,816	+		LRK53_RS05840	0.11	+0.1
1,354,816	+		LRK53_RS05840	0.11	-0.6
1,354,817	-		LRK53_RS05840	0.11	-2.5
1,354,817	-		LRK53_RS05840	0.11	+0.1
1,354,817	-		LRK53_RS05840	0.11	-1.1
1,354,817	-		LRK53_RS05840	0.11	+0.8
1,354,817	-		LRK53_RS05840	0.11	+0.3
1,354,817	-		LRK53_RS05840	0.11	-0.8