Experiment: 2-Deoxy-D-Ribose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS44395 and QEN71_RS44400 are separated by 533 nucleotides QEN71_RS44400 and QEN71_RS44405 are separated by 300 nucleotides
QEN71_RS44395: QEN71_RS44395 - tyrosine-type recombinase/integrase, at 352,312 to 353,244
_RS44395
QEN71_RS44400: QEN71_RS44400 - IS110 family transposase, at 353,778 to 354,908
_RS44400
QEN71_RS44405: QEN71_RS44405 - IS5 family transposase, at 355,209 to 356,015
_RS44405
Position (kb) 353
354
355 Strain fitness (log2 ratio) -2
-1
0
1 at 352.838 kb on + strand, within QEN71_RS44395 at 352.838 kb on + strand, within QEN71_RS44395 at 352.838 kb on + strand, within QEN71_RS44395 at 352.974 kb on - strand, within QEN71_RS44395 at 352.979 kb on - strand, within QEN71_RS44395 at 353.059 kb on - strand, within QEN71_RS44395 at 353.059 kb on - strand, within QEN71_RS44395 at 353.066 kb on + strand, within QEN71_RS44395 at 353.067 kb on - strand, within QEN71_RS44395 at 353.287 kb on - strand at 353.287 kb on - strand at 353.330 kb on + strand at 353.331 kb on - strand at 353.354 kb on + strand at 353.354 kb on + strand at 353.512 kb on + strand at 353.528 kb on - strand at 353.528 kb on - strand at 353.617 kb on - strand at 353.641 kb on - strand at 353.641 kb on - strand at 353.657 kb on - strand at 353.790 kb on - strand at 353.799 kb on + strand at 353.799 kb on + strand at 353.800 kb on - strand at 353.800 kb on - strand at 353.800 kb on - strand at 353.820 kb on - strand at 353.841 kb on + strand at 353.842 kb on - strand at 353.888 kb on + strand at 353.889 kb on - strand at 353.944 kb on + strand, within QEN71_RS44400 at 354.223 kb on + strand, within QEN71_RS44400 at 354.306 kb on + strand, within QEN71_RS44400 at 354.306 kb on + strand, within QEN71_RS44400 at 354.306 kb on + strand, within QEN71_RS44400 at 354.307 kb on - strand, within QEN71_RS44400 at 354.307 kb on - strand, within QEN71_RS44400 at 354.307 kb on - strand, within QEN71_RS44400 at 354.308 kb on + strand, within QEN71_RS44400 at 354.308 kb on + strand, within QEN71_RS44400 at 354.308 kb on + strand, within QEN71_RS44400 at 354.308 kb on + strand, within QEN71_RS44400 at 354.308 kb on + strand, within QEN71_RS44400 at 354.309 kb on - strand, within QEN71_RS44400 at 354.309 kb on - strand, within QEN71_RS44400 at 354.309 kb on - strand, within QEN71_RS44400 at 354.433 kb on - strand, within QEN71_RS44400 at 354.433 kb on - strand, within QEN71_RS44400 at 354.627 kb on + strand, within QEN71_RS44400 at 354.628 kb on - strand, within QEN71_RS44400 at 354.628 kb on - strand, within QEN71_RS44400 at 354.628 kb on - strand, within QEN71_RS44400 at 354.646 kb on + strand, within QEN71_RS44400 at 354.922 kb on + strand at 354.941 kb on + strand at 355.039 kb on + strand at 355.039 kb on + strand at 355.073 kb on - strand at 355.124 kb on + strand at 355.124 kb on + strand at 355.194 kb on + strand at 355.194 kb on + strand at 355.194 kb on + strand at 355.194 kb on + strand at 355.194 kb on + strand at 355.194 kb on + strand at 355.194 kb on + strand at 355.195 kb on - strand at 355.195 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-Ribose (C) remove 352,838 + QEN71_RS44395 0.56 -1.3 352,838 + QEN71_RS44395 0.56 -0.5 352,838 + QEN71_RS44395 0.56 -1.0 352,974 - QEN71_RS44395 0.71 +0.7 352,979 - QEN71_RS44395 0.71 +0.5 353,059 - QEN71_RS44395 0.80 -0.5 353,059 - QEN71_RS44395 0.80 -0.1 353,066 + QEN71_RS44395 0.81 +1.2 353,067 - QEN71_RS44395 0.81 -0.9 353,287 - -0.9 353,287 - +1.3 353,330 + -0.8 353,331 - -0.6 353,354 + -1.9 353,354 + -0.9 353,512 + -0.1 353,528 - +0.9 353,528 - -0.7 353,617 - -1.6 353,641 - -1.1 353,641 - +0.3 353,657 - -0.1 353,790 - -0.1 353,799 + +1.0 353,799 + +0.5 353,800 - -0.7 353,800 - -0.4 353,800 - -0.6 353,820 - -0.1 353,841 + +0.0 353,842 - +0.1 353,888 + +0.5 353,889 - -0.1 353,944 + QEN71_RS44400 0.15 +0.4 354,223 + QEN71_RS44400 0.39 +0.1 354,306 + QEN71_RS44400 0.47 +0.9 354,306 + QEN71_RS44400 0.47 -1.3 354,306 + QEN71_RS44400 0.47 -0.9 354,307 - QEN71_RS44400 0.47 -0.1 354,307 - QEN71_RS44400 0.47 -0.6 354,307 - QEN71_RS44400 0.47 -0.2 354,308 + QEN71_RS44400 0.47 -1.4 354,308 + QEN71_RS44400 0.47 -0.0 354,308 + QEN71_RS44400 0.47 +0.9 354,308 + QEN71_RS44400 0.47 -0.5 354,308 + QEN71_RS44400 0.47 -0.5 354,309 - QEN71_RS44400 0.47 +1.1 354,309 - QEN71_RS44400 0.47 -0.1 354,309 - QEN71_RS44400 0.47 -0.4 354,433 - QEN71_RS44400 0.58 +0.1 354,433 - QEN71_RS44400 0.58 +0.0 354,627 + QEN71_RS44400 0.75 -0.4 354,628 - QEN71_RS44400 0.75 -1.2 354,628 - QEN71_RS44400 0.75 -1.4 354,628 - QEN71_RS44400 0.75 -0.7 354,646 + QEN71_RS44400 0.77 -0.1 354,922 + +0.2 354,941 + +0.8 355,039 + +0.5 355,039 + -0.1 355,073 - -0.9 355,124 + -0.0 355,124 + +0.4 355,194 + -0.2 355,194 + +0.2 355,194 + +0.0 355,194 + +0.3 355,194 + -1.0 355,194 + -1.3 355,194 + -0.2 355,195 - -0.6 355,195 - -1.7
Or see this region's nucleotide sequence