Experiment: 2-Deoxy-D-Ribose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS44220 and QEN71_RS44225 are separated by 571 nucleotides QEN71_RS44225 and QEN71_RS44230 are separated by 79 nucleotides
QEN71_RS44220: QEN71_RS44220 - RolB family protein, at 319,945 to 320,592
_RS44220
QEN71_RS44225: QEN71_RS44225 - hypothetical protein, at 321,164 to 321,526
_RS44225
QEN71_RS44230: QEN71_RS44230 - IS110 family transposase, at 321,606 to 322,667
_RS44230
Position (kb) 321
322 Strain fitness (log2 ratio) -2
-1
0
1
2 at 320.189 kb on - strand, within QEN71_RS44220 at 320.189 kb on - strand, within QEN71_RS44220 at 320.209 kb on + strand, within QEN71_RS44220 at 320.209 kb on + strand, within QEN71_RS44220 at 320.210 kb on - strand, within QEN71_RS44220 at 320.210 kb on - strand, within QEN71_RS44220 at 320.213 kb on + strand, within QEN71_RS44220 at 320.213 kb on + strand, within QEN71_RS44220 at 320.214 kb on - strand, within QEN71_RS44220 at 320.214 kb on - strand, within QEN71_RS44220 at 320.264 kb on - strand, within QEN71_RS44220 at 320.286 kb on - strand, within QEN71_RS44220 at 320.288 kb on + strand, within QEN71_RS44220 at 320.288 kb on + strand, within QEN71_RS44220 at 320.348 kb on + strand, within QEN71_RS44220 at 320.367 kb on + strand, within QEN71_RS44220 at 320.368 kb on - strand, within QEN71_RS44220 at 320.368 kb on - strand, within QEN71_RS44220 at 320.435 kb on + strand, within QEN71_RS44220 at 320.436 kb on - strand, within QEN71_RS44220 at 320.436 kb on - strand, within QEN71_RS44220 at 320.480 kb on + strand, within QEN71_RS44220 at 320.480 kb on + strand, within QEN71_RS44220 at 320.481 kb on - strand, within QEN71_RS44220 at 320.539 kb on - strand at 320.603 kb on + strand at 320.603 kb on + strand at 320.603 kb on + strand at 320.603 kb on + strand at 320.603 kb on + strand at 320.603 kb on + strand at 320.604 kb on - strand at 320.604 kb on - strand at 320.604 kb on - strand at 320.604 kb on - strand at 320.611 kb on + strand at 320.611 kb on + strand at 320.612 kb on - strand at 320.612 kb on - strand at 320.667 kb on - strand at 320.674 kb on + strand at 320.674 kb on + strand at 320.678 kb on + strand at 320.678 kb on + strand at 320.678 kb on + strand at 320.678 kb on + strand at 320.679 kb on - strand at 320.680 kb on + strand at 320.681 kb on - strand at 320.682 kb on + strand at 320.682 kb on + strand at 320.682 kb on + strand at 320.683 kb on - strand at 320.683 kb on - strand at 320.683 kb on - strand at 320.683 kb on - strand at 320.683 kb on - strand at 320.683 kb on - strand at 320.684 kb on + strand at 320.684 kb on + strand at 320.684 kb on + strand at 320.684 kb on + strand at 320.685 kb on - strand at 320.891 kb on + strand at 320.927 kb on + strand at 320.928 kb on - strand at 320.983 kb on - strand at 321.054 kb on + strand at 321.055 kb on - strand at 321.055 kb on - strand at 321.055 kb on - strand at 321.057 kb on - strand at 321.146 kb on + strand at 321.146 kb on + strand at 321.147 kb on - strand at 321.147 kb on - strand at 321.326 kb on + strand, within QEN71_RS44225 at 321.326 kb on + strand, within QEN71_RS44225 at 321.331 kb on - strand, within QEN71_RS44225 at 321.384 kb on - strand, within QEN71_RS44225
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-Ribose (C) remove 320,189 - QEN71_RS44220 0.38 +0.8 320,189 - QEN71_RS44220 0.38 -1.6 320,209 + QEN71_RS44220 0.41 -0.1 320,209 + QEN71_RS44220 0.41 -0.3 320,210 - QEN71_RS44220 0.41 -0.5 320,210 - QEN71_RS44220 0.41 -0.4 320,213 + QEN71_RS44220 0.41 +0.1 320,213 + QEN71_RS44220 0.41 -0.1 320,214 - QEN71_RS44220 0.42 +0.9 320,214 - QEN71_RS44220 0.42 +0.5 320,264 - QEN71_RS44220 0.49 -1.4 320,286 - QEN71_RS44220 0.53 +0.0 320,288 + QEN71_RS44220 0.53 +2.1 320,288 + QEN71_RS44220 0.53 +1.2 320,348 + QEN71_RS44220 0.62 -1.7 320,367 + QEN71_RS44220 0.65 -0.6 320,368 - QEN71_RS44220 0.65 +1.6 320,368 - QEN71_RS44220 0.65 +0.3 320,435 + QEN71_RS44220 0.76 -1.2 320,436 - QEN71_RS44220 0.76 +0.4 320,436 - QEN71_RS44220 0.76 -0.6 320,480 + QEN71_RS44220 0.83 -1.3 320,480 + QEN71_RS44220 0.83 -1.7 320,481 - QEN71_RS44220 0.83 -0.9 320,539 - -0.1 320,603 + -0.1 320,603 + -0.3 320,603 + -0.7 320,603 + -0.5 320,603 + +1.0 320,603 + -0.4 320,604 - -2.3 320,604 - -0.4 320,604 - +0.9 320,604 - -0.8 320,611 + +0.8 320,611 + -0.9 320,612 - +0.3 320,612 - -1.1 320,667 - +1.6 320,674 + -2.0 320,674 + -0.1 320,678 + -0.2 320,678 + -0.8 320,678 + -0.1 320,678 + -0.5 320,679 - -1.6 320,680 + +0.2 320,681 - +0.3 320,682 + -0.4 320,682 + -0.4 320,682 + +0.2 320,683 - -1.1 320,683 - -1.6 320,683 - +0.0 320,683 - -0.1 320,683 - -0.4 320,683 - +0.3 320,684 + +0.2 320,684 + +0.2 320,684 + -1.1 320,684 + +1.1 320,685 - +0.7 320,891 + +0.3 320,927 + -0.2 320,928 - -0.3 320,983 - -2.2 321,054 + -0.4 321,055 - -0.9 321,055 - -0.3 321,055 - -0.0 321,057 - -0.1 321,146 + +0.2 321,146 + -0.5 321,147 - +0.6 321,147 - -1.0 321,326 + QEN71_RS44225 0.45 -0.1 321,326 + QEN71_RS44225 0.45 -1.4 321,331 - QEN71_RS44225 0.46 -0.4 321,384 - QEN71_RS44225 0.61 -1.4
Or see this region's nucleotide sequence