Experiment: 2-Deoxy-D-Ribose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS41535 and QEN71_RS41540 are separated by 123 nucleotides QEN71_RS41540 and QEN71_RS41545 are separated by 3 nucleotides
QEN71_RS41535: QEN71_RS41535 - cupin domain-containing protein, at 392,752 to 393,876
_RS41535
QEN71_RS41540: QEN71_RS41540 - aminotransferase class V-fold PLP-dependent enzyme, at 394,000 to 395,133
_RS41540
QEN71_RS41545: QEN71_RS41545 - MFS transporter, at 395,137 to 396,429
_RS41545
Position (kb) 393
394
395
396 Strain fitness (log2 ratio) -2
-1
0
1 at 393.128 kb on + strand, within QEN71_RS41535 at 393.128 kb on + strand, within QEN71_RS41535 at 393.129 kb on - strand, within QEN71_RS41535 at 393.368 kb on + strand, within QEN71_RS41535 at 393.662 kb on - strand, within QEN71_RS41535 at 393.662 kb on - strand, within QEN71_RS41535 at 393.662 kb on - strand, within QEN71_RS41535 at 393.814 kb on + strand at 393.814 kb on + strand at 393.989 kb on - strand at 394.373 kb on + strand, within QEN71_RS41540 at 394.733 kb on + strand, within QEN71_RS41540 at 394.733 kb on + strand, within QEN71_RS41540 at 395.075 kb on + strand at 395.093 kb on + strand at 395.093 kb on + strand at 395.093 kb on + strand at 395.093 kb on + strand at 395.094 kb on - strand at 395.094 kb on - strand at 395.165 kb on + strand at 395.165 kb on + strand at 395.166 kb on - strand at 395.211 kb on - strand at 395.211 kb on - strand at 395.303 kb on + strand, within QEN71_RS41545 at 395.304 kb on - strand, within QEN71_RS41545 at 395.304 kb on - strand, within QEN71_RS41545 at 395.378 kb on + strand, within QEN71_RS41545 at 395.379 kb on - strand, within QEN71_RS41545 at 395.466 kb on - strand, within QEN71_RS41545 at 395.630 kb on + strand, within QEN71_RS41545 at 395.630 kb on + strand, within QEN71_RS41545 at 395.642 kb on + strand, within QEN71_RS41545 at 395.642 kb on + strand, within QEN71_RS41545 at 395.642 kb on + strand, within QEN71_RS41545 at 395.643 kb on - strand, within QEN71_RS41545 at 395.643 kb on - strand, within QEN71_RS41545 at 395.643 kb on - strand, within QEN71_RS41545 at 395.643 kb on - strand, within QEN71_RS41545 at 395.799 kb on + strand, within QEN71_RS41545 at 395.800 kb on - strand, within QEN71_RS41545 at 395.801 kb on + strand, within QEN71_RS41545 at 395.801 kb on + strand, within QEN71_RS41545 at 395.801 kb on + strand, within QEN71_RS41545 at 395.801 kb on + strand, within QEN71_RS41545 at 395.801 kb on + strand, within QEN71_RS41545 at 395.802 kb on - strand, within QEN71_RS41545 at 395.802 kb on - strand, within QEN71_RS41545
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-Ribose (C) remove 393,128 + QEN71_RS41535 0.33 +0.2 393,128 + QEN71_RS41535 0.33 -1.2 393,129 - QEN71_RS41535 0.34 +0.3 393,368 + QEN71_RS41535 0.55 -0.5 393,662 - QEN71_RS41535 0.81 +0.3 393,662 - QEN71_RS41535 0.81 -2.0 393,662 - QEN71_RS41535 0.81 -0.5 393,814 + +0.0 393,814 + +1.1 393,989 - -1.2 394,373 + QEN71_RS41540 0.33 -0.9 394,733 + QEN71_RS41540 0.65 -0.4 394,733 + QEN71_RS41540 0.65 -1.5 395,075 + +0.4 395,093 + -0.1 395,093 + -1.2 395,093 + -0.2 395,093 + -0.3 395,094 - +1.4 395,094 - -0.2 395,165 + -0.1 395,165 + +0.9 395,166 - -0.2 395,211 - -0.2 395,211 - -0.6 395,303 + QEN71_RS41545 0.13 +0.3 395,304 - QEN71_RS41545 0.13 +0.2 395,304 - QEN71_RS41545 0.13 -0.6 395,378 + QEN71_RS41545 0.19 -1.0 395,379 - QEN71_RS41545 0.19 -1.4 395,466 - QEN71_RS41545 0.25 -0.1 395,630 + QEN71_RS41545 0.38 -0.0 395,630 + QEN71_RS41545 0.38 +0.5 395,642 + QEN71_RS41545 0.39 +0.6 395,642 + QEN71_RS41545 0.39 -0.5 395,642 + QEN71_RS41545 0.39 -0.7 395,643 - QEN71_RS41545 0.39 -0.0 395,643 - QEN71_RS41545 0.39 +0.3 395,643 - QEN71_RS41545 0.39 -0.2 395,643 - QEN71_RS41545 0.39 +0.1 395,799 + QEN71_RS41545 0.51 +0.4 395,800 - QEN71_RS41545 0.51 +0.1 395,801 + QEN71_RS41545 0.51 -1.4 395,801 + QEN71_RS41545 0.51 -2.3 395,801 + QEN71_RS41545 0.51 -0.6 395,801 + QEN71_RS41545 0.51 +0.6 395,801 + QEN71_RS41545 0.51 +0.2 395,802 - QEN71_RS41545 0.51 +0.1 395,802 - QEN71_RS41545 0.51 +0.4
Or see this region's nucleotide sequence