Experiment: 2-Deoxy-D-Ribose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS39075 and QEN71_RS39080 are separated by 122 nucleotides QEN71_RS39080 and QEN71_RS39085 are separated by 732 nucleotides
QEN71_RS39075: QEN71_RS39075 - FAD-dependent monooxygenase, at 2,148,106 to 2,149,668
_RS39075
QEN71_RS39080: QEN71_RS39080 - TMEM175 family protein, at 2,149,791 to 2,150,450
_RS39080
QEN71_RS39085: QEN71_RS39085 - LysR family transcriptional regulator, at 2,151,183 to 2,152,145
_RS39085
Position (kb)
2149
2150
2151 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2148.808 kb on + strand, within QEN71_RS39075 at 2148.808 kb on + strand, within QEN71_RS39075 at 2148.808 kb on + strand, within QEN71_RS39075 at 2148.808 kb on + strand, within QEN71_RS39075 at 2148.808 kb on + strand, within QEN71_RS39075 at 2148.808 kb on + strand, within QEN71_RS39075 at 2148.808 kb on + strand, within QEN71_RS39075 at 2148.808 kb on + strand, within QEN71_RS39075 at 2148.808 kb on + strand, within QEN71_RS39075 at 2148.809 kb on - strand, within QEN71_RS39075 at 2148.809 kb on - strand, within QEN71_RS39075 at 2148.809 kb on - strand, within QEN71_RS39075 at 2148.809 kb on - strand, within QEN71_RS39075 at 2148.809 kb on - strand, within QEN71_RS39075 at 2148.809 kb on - strand, within QEN71_RS39075 at 2148.809 kb on - strand, within QEN71_RS39075 at 2148.809 kb on - strand, within QEN71_RS39075 at 2148.811 kb on - strand, within QEN71_RS39075 at 2148.814 kb on + strand, within QEN71_RS39075 at 2148.814 kb on + strand, within QEN71_RS39075 at 2148.814 kb on + strand, within QEN71_RS39075 at 2148.814 kb on + strand, within QEN71_RS39075 at 2148.815 kb on - strand, within QEN71_RS39075 at 2148.815 kb on - strand, within QEN71_RS39075 at 2148.815 kb on - strand, within QEN71_RS39075 at 2148.815 kb on - strand, within QEN71_RS39075 at 2148.815 kb on - strand, within QEN71_RS39075 at 2149.501 kb on + strand, within QEN71_RS39075 at 2149.501 kb on + strand, within QEN71_RS39075 at 2149.502 kb on - strand, within QEN71_RS39075 at 2149.502 kb on - strand, within QEN71_RS39075 at 2149.502 kb on - strand, within QEN71_RS39075 at 2149.502 kb on - strand, within QEN71_RS39075 at 2149.670 kb on + strand at 2149.670 kb on + strand at 2149.671 kb on - strand at 2149.895 kb on + strand, within QEN71_RS39080 at 2149.896 kb on - strand, within QEN71_RS39080 at 2150.065 kb on + strand, within QEN71_RS39080 at 2150.066 kb on - strand, within QEN71_RS39080 at 2150.069 kb on + strand, within QEN71_RS39080 at 2150.069 kb on + strand, within QEN71_RS39080 at 2150.069 kb on + strand, within QEN71_RS39080 at 2150.070 kb on - strand, within QEN71_RS39080 at 2150.080 kb on + strand, within QEN71_RS39080 at 2150.080 kb on + strand, within QEN71_RS39080 at 2150.080 kb on + strand, within QEN71_RS39080 at 2150.081 kb on - strand, within QEN71_RS39080 at 2150.081 kb on - strand, within QEN71_RS39080 at 2150.081 kb on - strand, within QEN71_RS39080 at 2150.081 kb on - strand, within QEN71_RS39080 at 2150.114 kb on - strand, within QEN71_RS39080 at 2150.114 kb on - strand, within QEN71_RS39080 at 2150.287 kb on + strand, within QEN71_RS39080 at 2150.300 kb on - strand, within QEN71_RS39080 at 2150.300 kb on - strand, within QEN71_RS39080 at 2150.376 kb on + strand, within QEN71_RS39080 at 2150.376 kb on + strand, within QEN71_RS39080 at 2150.459 kb on - strand at 2150.501 kb on - strand at 2150.538 kb on + strand at 2150.637 kb on + strand at 2150.637 kb on + strand at 2150.820 kb on - strand at 2150.962 kb on + strand at 2151.158 kb on - strand at 2151.158 kb on - strand at 2151.189 kb on - strand at 2151.285 kb on + strand, within QEN71_RS39085
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-Ribose (C) remove 2,148,808 + QEN71_RS39075 0.45 -0.1 2,148,808 + QEN71_RS39075 0.45 +0.1 2,148,808 + QEN71_RS39075 0.45 -0.1 2,148,808 + QEN71_RS39075 0.45 +1.0 2,148,808 + QEN71_RS39075 0.45 -0.3 2,148,808 + QEN71_RS39075 0.45 -0.4 2,148,808 + QEN71_RS39075 0.45 +1.0 2,148,808 + QEN71_RS39075 0.45 +0.0 2,148,808 + QEN71_RS39075 0.45 +0.2 2,148,809 - QEN71_RS39075 0.45 -0.8 2,148,809 - QEN71_RS39075 0.45 -1.0 2,148,809 - QEN71_RS39075 0.45 -0.6 2,148,809 - QEN71_RS39075 0.45 +0.0 2,148,809 - QEN71_RS39075 0.45 +0.3 2,148,809 - QEN71_RS39075 0.45 +1.8 2,148,809 - QEN71_RS39075 0.45 +1.5 2,148,809 - QEN71_RS39075 0.45 +1.7 2,148,811 - QEN71_RS39075 0.45 +0.2 2,148,814 + QEN71_RS39075 0.45 -1.0 2,148,814 + QEN71_RS39075 0.45 -0.3 2,148,814 + QEN71_RS39075 0.45 -0.2 2,148,814 + QEN71_RS39075 0.45 +0.2 2,148,815 - QEN71_RS39075 0.45 -0.6 2,148,815 - QEN71_RS39075 0.45 +1.3 2,148,815 - QEN71_RS39075 0.45 +1.3 2,148,815 - QEN71_RS39075 0.45 +2.2 2,148,815 - QEN71_RS39075 0.45 +0.4 2,149,501 + QEN71_RS39075 0.89 -0.5 2,149,501 + QEN71_RS39075 0.89 -0.1 2,149,502 - QEN71_RS39075 0.89 +1.6 2,149,502 - QEN71_RS39075 0.89 -0.9 2,149,502 - QEN71_RS39075 0.89 -0.9 2,149,502 - QEN71_RS39075 0.89 -1.5 2,149,670 + -1.8 2,149,670 + -0.1 2,149,671 - -0.7 2,149,895 + QEN71_RS39080 0.16 +0.4 2,149,896 - QEN71_RS39080 0.16 -0.6 2,150,065 + QEN71_RS39080 0.42 +0.7 2,150,066 - QEN71_RS39080 0.42 +0.4 2,150,069 + QEN71_RS39080 0.42 +0.8 2,150,069 + QEN71_RS39080 0.42 -1.2 2,150,069 + QEN71_RS39080 0.42 -1.6 2,150,070 - QEN71_RS39080 0.42 -0.2 2,150,080 + QEN71_RS39080 0.44 +0.6 2,150,080 + QEN71_RS39080 0.44 -2.0 2,150,080 + QEN71_RS39080 0.44 +0.2 2,150,081 - QEN71_RS39080 0.44 -0.6 2,150,081 - QEN71_RS39080 0.44 -0.4 2,150,081 - QEN71_RS39080 0.44 -0.8 2,150,081 - QEN71_RS39080 0.44 +0.0 2,150,114 - QEN71_RS39080 0.49 -0.2 2,150,114 - QEN71_RS39080 0.49 +1.8 2,150,287 + QEN71_RS39080 0.75 -0.8 2,150,300 - QEN71_RS39080 0.77 +0.0 2,150,300 - QEN71_RS39080 0.77 -0.4 2,150,376 + QEN71_RS39080 0.89 +1.4 2,150,376 + QEN71_RS39080 0.89 -0.3 2,150,459 - +0.4 2,150,501 - +0.6 2,150,538 + -0.0 2,150,637 + -0.3 2,150,637 + +0.7 2,150,820 - +2.6 2,150,962 + -0.5 2,151,158 - -0.3 2,151,158 - +1.6 2,151,189 - +0.5 2,151,285 + QEN71_RS39085 0.11 +0.6
Or see this region's nucleotide sequence