Experiment: 2-Deoxy-D-Ribose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS36050 and QEN71_RS36055 are separated by 19 nucleotides QEN71_RS36055 and QEN71_RS36060 overlap by 4 nucleotides
QEN71_RS36050: QEN71_RS36050 - dihydroxyacetone kinase subunit DhaK, at 1,472,037 to 1,473,035
_RS36050
QEN71_RS36055: QEN71_RS36055 - ABC transporter permease, at 1,473,055 to 1,474,056
_RS36055
QEN71_RS36060: QEN71_RS36060 - sugar ABC transporter ATP-binding protein, at 1,474,053 to 1,475,615
_RS36060
Position (kb)
1473
1474
1475 Strain fitness (log2 ratio)
-2
-1
0
1 at 1472.147 kb on - strand, within QEN71_RS36050 at 1472.147 kb on - strand, within QEN71_RS36050 at 1472.158 kb on + strand, within QEN71_RS36050 at 1472.159 kb on - strand, within QEN71_RS36050 at 1472.205 kb on - strand, within QEN71_RS36050 at 1472.222 kb on - strand, within QEN71_RS36050 at 1472.381 kb on + strand, within QEN71_RS36050 at 1472.728 kb on + strand, within QEN71_RS36050 at 1472.728 kb on + strand, within QEN71_RS36050 at 1472.729 kb on - strand, within QEN71_RS36050 at 1472.729 kb on - strand, within QEN71_RS36050 at 1472.729 kb on - strand, within QEN71_RS36050 at 1472.729 kb on - strand, within QEN71_RS36050 at 1472.729 kb on - strand, within QEN71_RS36050 at 1473.187 kb on + strand, within QEN71_RS36055 at 1473.187 kb on + strand, within QEN71_RS36055 at 1473.187 kb on + strand, within QEN71_RS36055 at 1473.195 kb on + strand, within QEN71_RS36055 at 1473.662 kb on - strand, within QEN71_RS36055 at 1473.889 kb on + strand, within QEN71_RS36055 at 1473.889 kb on + strand, within QEN71_RS36055 at 1473.890 kb on - strand, within QEN71_RS36055 at 1473.890 kb on - strand, within QEN71_RS36055 at 1474.142 kb on - strand at 1474.142 kb on - strand at 1474.236 kb on - strand, within QEN71_RS36060 at 1474.243 kb on + strand, within QEN71_RS36060 at 1474.244 kb on - strand, within QEN71_RS36060 at 1474.811 kb on - strand, within QEN71_RS36060 at 1474.811 kb on - strand, within QEN71_RS36060 at 1474.959 kb on - strand, within QEN71_RS36060
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-Ribose (C) remove 1,472,147 - QEN71_RS36050 0.11 -0.4 1,472,147 - QEN71_RS36050 0.11 -0.3 1,472,158 + QEN71_RS36050 0.12 -0.6 1,472,159 - QEN71_RS36050 0.12 -0.0 1,472,205 - QEN71_RS36050 0.17 -0.1 1,472,222 - QEN71_RS36050 0.19 +0.7 1,472,381 + QEN71_RS36050 0.34 -0.3 1,472,728 + QEN71_RS36050 0.69 -1.8 1,472,728 + QEN71_RS36050 0.69 +0.1 1,472,729 - QEN71_RS36050 0.69 -0.2 1,472,729 - QEN71_RS36050 0.69 +0.9 1,472,729 - QEN71_RS36050 0.69 +0.1 1,472,729 - QEN71_RS36050 0.69 +0.7 1,472,729 - QEN71_RS36050 0.69 +0.3 1,473,187 + QEN71_RS36055 0.13 -0.1 1,473,187 + QEN71_RS36055 0.13 +0.6 1,473,187 + QEN71_RS36055 0.13 +0.5 1,473,195 + QEN71_RS36055 0.14 -0.1 1,473,662 - QEN71_RS36055 0.61 -1.5 1,473,889 + QEN71_RS36055 0.83 +0.3 1,473,889 + QEN71_RS36055 0.83 -0.5 1,473,890 - QEN71_RS36055 0.83 +0.2 1,473,890 - QEN71_RS36055 0.83 +0.9 1,474,142 - -0.6 1,474,142 - -0.2 1,474,236 - QEN71_RS36060 0.12 -0.2 1,474,243 + QEN71_RS36060 0.12 +1.0 1,474,244 - QEN71_RS36060 0.12 +0.2 1,474,811 - QEN71_RS36060 0.48 -2.0 1,474,811 - QEN71_RS36060 0.48 +0.5 1,474,959 - QEN71_RS36060 0.58 +0.2
Or see this region's nucleotide sequence