Experiment: 2-Deoxy-D-Ribose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS35785 and QEN71_RS35790 are separated by 251 nucleotides QEN71_RS35790 and QEN71_RS35795 are separated by 183 nucleotides
QEN71_RS35785: QEN71_RS35785 - sugar ABC transporter ATP-binding protein, at 1,410,983 to 1,412,476
_RS35785
QEN71_RS35790: QEN71_RS35790 - LacI family DNA-binding transcriptional regulator, at 1,412,728 to 1,413,822
_RS35790
QEN71_RS35795: QEN71_RS35795 - GMC family oxidoreductase N-terminal domain-containing protein, at 1,414,006 to 1,415,649
_RS35795
Position (kb)
1412
1413
1414 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 1411.738 kb on + strand, within QEN71_RS35785 at 1411.738 kb on + strand, within QEN71_RS35785 at 1411.739 kb on - strand, within QEN71_RS35785 at 1411.798 kb on + strand, within QEN71_RS35785 at 1411.808 kb on - strand, within QEN71_RS35785 at 1411.884 kb on + strand, within QEN71_RS35785 at 1411.884 kb on + strand, within QEN71_RS35785 at 1411.884 kb on + strand, within QEN71_RS35785 at 1411.918 kb on + strand, within QEN71_RS35785 at 1411.918 kb on + strand, within QEN71_RS35785 at 1411.918 kb on + strand, within QEN71_RS35785 at 1411.919 kb on - strand, within QEN71_RS35785 at 1411.919 kb on - strand, within QEN71_RS35785 at 1411.930 kb on + strand, within QEN71_RS35785 at 1412.175 kb on - strand, within QEN71_RS35785 at 1412.220 kb on + strand, within QEN71_RS35785 at 1412.221 kb on - strand, within QEN71_RS35785 at 1412.221 kb on - strand, within QEN71_RS35785 at 1412.221 kb on - strand, within QEN71_RS35785 at 1412.314 kb on - strand, within QEN71_RS35785 at 1412.314 kb on - strand, within QEN71_RS35785 at 1412.314 kb on - strand, within QEN71_RS35785 at 1412.314 kb on - strand, within QEN71_RS35785 at 1412.521 kb on + strand at 1412.643 kb on + strand at 1412.644 kb on - strand at 1412.762 kb on + strand at 1412.762 kb on + strand at 1412.903 kb on + strand, within QEN71_RS35790 at 1412.903 kb on + strand, within QEN71_RS35790 at 1412.903 kb on + strand, within QEN71_RS35790 at 1412.903 kb on + strand, within QEN71_RS35790 at 1412.903 kb on + strand, within QEN71_RS35790 at 1412.903 kb on + strand, within QEN71_RS35790 at 1412.903 kb on + strand, within QEN71_RS35790 at 1412.903 kb on + strand, within QEN71_RS35790 at 1412.903 kb on + strand, within QEN71_RS35790 at 1412.903 kb on + strand, within QEN71_RS35790 at 1412.903 kb on + strand, within QEN71_RS35790 at 1413.009 kb on + strand, within QEN71_RS35790 at 1413.009 kb on + strand, within QEN71_RS35790 at 1413.009 kb on + strand, within QEN71_RS35790 at 1413.009 kb on + strand, within QEN71_RS35790 at 1413.009 kb on + strand, within QEN71_RS35790 at 1413.010 kb on - strand, within QEN71_RS35790 at 1413.010 kb on - strand, within QEN71_RS35790 at 1413.010 kb on - strand, within QEN71_RS35790 at 1413.010 kb on - strand, within QEN71_RS35790 at 1413.010 kb on - strand, within QEN71_RS35790 at 1413.020 kb on - strand, within QEN71_RS35790 at 1413.020 kb on - strand, within QEN71_RS35790 at 1413.121 kb on + strand, within QEN71_RS35790 at 1413.121 kb on + strand, within QEN71_RS35790 at 1413.122 kb on - strand, within QEN71_RS35790 at 1413.196 kb on - strand, within QEN71_RS35790 at 1413.206 kb on + strand, within QEN71_RS35790 at 1413.209 kb on + strand, within QEN71_RS35790 at 1413.209 kb on + strand, within QEN71_RS35790 at 1413.209 kb on + strand, within QEN71_RS35790 at 1413.210 kb on - strand, within QEN71_RS35790 at 1413.210 kb on - strand, within QEN71_RS35790 at 1413.224 kb on + strand, within QEN71_RS35790 at 1413.233 kb on + strand, within QEN71_RS35790 at 1413.233 kb on + strand, within QEN71_RS35790 at 1413.233 kb on + strand, within QEN71_RS35790 at 1413.234 kb on - strand, within QEN71_RS35790 at 1413.241 kb on + strand, within QEN71_RS35790 at 1413.241 kb on + strand, within QEN71_RS35790 at 1413.241 kb on + strand, within QEN71_RS35790 at 1413.241 kb on + strand, within QEN71_RS35790 at 1413.242 kb on - strand, within QEN71_RS35790 at 1413.242 kb on - strand, within QEN71_RS35790 at 1413.242 kb on - strand, within QEN71_RS35790 at 1413.286 kb on - strand, within QEN71_RS35790 at 1413.466 kb on + strand, within QEN71_RS35790 at 1413.466 kb on + strand, within QEN71_RS35790 at 1413.466 kb on + strand, within QEN71_RS35790 at 1413.467 kb on - strand, within QEN71_RS35790 at 1413.485 kb on - strand, within QEN71_RS35790 at 1413.650 kb on - strand, within QEN71_RS35790 at 1413.666 kb on + strand, within QEN71_RS35790 at 1413.666 kb on + strand, within QEN71_RS35790 at 1413.667 kb on - strand, within QEN71_RS35790 at 1413.878 kb on + strand at 1413.878 kb on + strand at 1413.878 kb on + strand at 1413.878 kb on + strand at 1413.879 kb on - strand at 1414.018 kb on + strand at 1414.018 kb on + strand at 1414.018 kb on + strand at 1414.018 kb on + strand at 1414.018 kb on + strand at 1414.018 kb on + strand at 1414.019 kb on - strand at 1414.019 kb on - strand at 1414.019 kb on - strand at 1414.019 kb on - strand at 1414.257 kb on - strand, within QEN71_RS35795 at 1414.292 kb on + strand, within QEN71_RS35795 at 1414.293 kb on - strand, within QEN71_RS35795 at 1414.343 kb on + strand, within QEN71_RS35795 at 1414.343 kb on + strand, within QEN71_RS35795 at 1414.343 kb on + strand, within QEN71_RS35795 at 1414.343 kb on + strand, within QEN71_RS35795 at 1414.344 kb on - strand, within QEN71_RS35795 at 1414.344 kb on - strand, within QEN71_RS35795 at 1414.344 kb on - strand, within QEN71_RS35795 at 1414.403 kb on + strand, within QEN71_RS35795 at 1414.403 kb on + strand, within QEN71_RS35795 at 1414.403 kb on + strand, within QEN71_RS35795 at 1414.403 kb on + strand, within QEN71_RS35795 at 1414.403 kb on + strand, within QEN71_RS35795 at 1414.404 kb on - strand, within QEN71_RS35795 at 1414.404 kb on - strand, within QEN71_RS35795 at 1414.404 kb on - strand, within QEN71_RS35795 at 1414.404 kb on - strand, within QEN71_RS35795 at 1414.415 kb on + strand, within QEN71_RS35795 at 1414.416 kb on - strand, within QEN71_RS35795 at 1414.511 kb on + strand, within QEN71_RS35795 at 1414.511 kb on + strand, within QEN71_RS35795 at 1414.512 kb on - strand, within QEN71_RS35795 at 1414.512 kb on - strand, within QEN71_RS35795 at 1414.544 kb on - strand, within QEN71_RS35795 at 1414.685 kb on + strand, within QEN71_RS35795 at 1414.686 kb on - strand, within QEN71_RS35795 at 1414.724 kb on + strand, within QEN71_RS35795 at 1414.724 kb on + strand, within QEN71_RS35795 at 1414.724 kb on + strand, within QEN71_RS35795 at 1414.724 kb on + strand, within QEN71_RS35795 at 1414.724 kb on + strand, within QEN71_RS35795 at 1414.724 kb on + strand, within QEN71_RS35795 at 1414.725 kb on - strand, within QEN71_RS35795 at 1414.725 kb on - strand, within QEN71_RS35795 at 1414.733 kb on + strand, within QEN71_RS35795 at 1414.733 kb on + strand, within QEN71_RS35795 at 1414.734 kb on - strand, within QEN71_RS35795 at 1414.757 kb on + strand, within QEN71_RS35795 at 1414.757 kb on + strand, within QEN71_RS35795 at 1414.757 kb on + strand, within QEN71_RS35795 at 1414.757 kb on + strand, within QEN71_RS35795 at 1414.757 kb on + strand, within QEN71_RS35795 at 1414.758 kb on - strand, within QEN71_RS35795 at 1414.758 kb on - strand, within QEN71_RS35795 at 1414.758 kb on - strand, within QEN71_RS35795
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-Ribose (C) remove 1,411,738 + QEN71_RS35785 0.51 +0.0 1,411,738 + QEN71_RS35785 0.51 -1.1 1,411,739 - QEN71_RS35785 0.51 -0.2 1,411,798 + QEN71_RS35785 0.55 -0.6 1,411,808 - QEN71_RS35785 0.55 -0.1 1,411,884 + QEN71_RS35785 0.60 +0.8 1,411,884 + QEN71_RS35785 0.60 -0.3 1,411,884 + QEN71_RS35785 0.60 +0.3 1,411,918 + QEN71_RS35785 0.63 -0.1 1,411,918 + QEN71_RS35785 0.63 +0.4 1,411,918 + QEN71_RS35785 0.63 -0.2 1,411,919 - QEN71_RS35785 0.63 -0.0 1,411,919 - QEN71_RS35785 0.63 +1.2 1,411,930 + QEN71_RS35785 0.63 +0.6 1,412,175 - QEN71_RS35785 0.80 -1.2 1,412,220 + QEN71_RS35785 0.83 +0.5 1,412,221 - QEN71_RS35785 0.83 -1.6 1,412,221 - QEN71_RS35785 0.83 +0.8 1,412,221 - QEN71_RS35785 0.83 +0.8 1,412,314 - QEN71_RS35785 0.89 -0.7 1,412,314 - QEN71_RS35785 0.89 +0.6 1,412,314 - QEN71_RS35785 0.89 -1.0 1,412,314 - QEN71_RS35785 0.89 +0.2 1,412,521 + +0.6 1,412,643 + -0.4 1,412,644 - +1.5 1,412,762 + -1.5 1,412,762 + -1.4 1,412,903 + QEN71_RS35790 0.16 -1.2 1,412,903 + QEN71_RS35790 0.16 -0.5 1,412,903 + QEN71_RS35790 0.16 -1.3 1,412,903 + QEN71_RS35790 0.16 -0.6 1,412,903 + QEN71_RS35790 0.16 -3.3 1,412,903 + QEN71_RS35790 0.16 -0.6 1,412,903 + QEN71_RS35790 0.16 -1.3 1,412,903 + QEN71_RS35790 0.16 -1.9 1,412,903 + QEN71_RS35790 0.16 -0.9 1,412,903 + QEN71_RS35790 0.16 -1.2 1,412,903 + QEN71_RS35790 0.16 +0.2 1,413,009 + QEN71_RS35790 0.26 +0.6 1,413,009 + QEN71_RS35790 0.26 -0.6 1,413,009 + QEN71_RS35790 0.26 -2.4 1,413,009 + QEN71_RS35790 0.26 -3.1 1,413,009 + QEN71_RS35790 0.26 -0.1 1,413,010 - QEN71_RS35790 0.26 -0.4 1,413,010 - QEN71_RS35790 0.26 -3.0 1,413,010 - QEN71_RS35790 0.26 -3.3 1,413,010 - QEN71_RS35790 0.26 -0.1 1,413,010 - QEN71_RS35790 0.26 -2.1 1,413,020 - QEN71_RS35790 0.27 +0.4 1,413,020 - QEN71_RS35790 0.27 -1.2 1,413,121 + QEN71_RS35790 0.36 +0.9 1,413,121 + QEN71_RS35790 0.36 -1.1 1,413,122 - QEN71_RS35790 0.36 -0.4 1,413,196 - QEN71_RS35790 0.43 -1.1 1,413,206 + QEN71_RS35790 0.44 -0.8 1,413,209 + QEN71_RS35790 0.44 -1.1 1,413,209 + QEN71_RS35790 0.44 -2.4 1,413,209 + QEN71_RS35790 0.44 -0.6 1,413,210 - QEN71_RS35790 0.44 -2.5 1,413,210 - QEN71_RS35790 0.44 -0.1 1,413,224 + QEN71_RS35790 0.45 -0.9 1,413,233 + QEN71_RS35790 0.46 -0.7 1,413,233 + QEN71_RS35790 0.46 -1.4 1,413,233 + QEN71_RS35790 0.46 -2.1 1,413,234 - QEN71_RS35790 0.46 -1.6 1,413,241 + QEN71_RS35790 0.47 -1.4 1,413,241 + QEN71_RS35790 0.47 -3.8 1,413,241 + QEN71_RS35790 0.47 -2.1 1,413,241 + QEN71_RS35790 0.47 -1.2 1,413,242 - QEN71_RS35790 0.47 +0.2 1,413,242 - QEN71_RS35790 0.47 -0.4 1,413,242 - QEN71_RS35790 0.47 -0.9 1,413,286 - QEN71_RS35790 0.51 -1.1 1,413,466 + QEN71_RS35790 0.67 -1.8 1,413,466 + QEN71_RS35790 0.67 -2.4 1,413,466 + QEN71_RS35790 0.67 -3.8 1,413,467 - QEN71_RS35790 0.67 -1.3 1,413,485 - QEN71_RS35790 0.69 -1.5 1,413,650 - QEN71_RS35790 0.84 -1.2 1,413,666 + QEN71_RS35790 0.86 -0.8 1,413,666 + QEN71_RS35790 0.86 -2.9 1,413,667 - QEN71_RS35790 0.86 -2.6 1,413,878 + +0.8 1,413,878 + -0.3 1,413,878 + -0.8 1,413,878 + +0.8 1,413,879 - -0.9 1,414,018 + +0.9 1,414,018 + -0.0 1,414,018 + -0.5 1,414,018 + -0.8 1,414,018 + +1.0 1,414,018 + -0.5 1,414,019 - +2.9 1,414,019 - +0.4 1,414,019 - -0.9 1,414,019 - -1.6 1,414,257 - QEN71_RS35795 0.15 +1.8 1,414,292 + QEN71_RS35795 0.17 -1.2 1,414,293 - QEN71_RS35795 0.17 -0.5 1,414,343 + QEN71_RS35795 0.20 +0.5 1,414,343 + QEN71_RS35795 0.20 +0.2 1,414,343 + QEN71_RS35795 0.20 -0.5 1,414,343 + QEN71_RS35795 0.20 -0.4 1,414,344 - QEN71_RS35795 0.21 -1.3 1,414,344 - QEN71_RS35795 0.21 -0.0 1,414,344 - QEN71_RS35795 0.21 -0.1 1,414,403 + QEN71_RS35795 0.24 -0.5 1,414,403 + QEN71_RS35795 0.24 -0.5 1,414,403 + QEN71_RS35795 0.24 -0.4 1,414,403 + QEN71_RS35795 0.24 +0.7 1,414,403 + QEN71_RS35795 0.24 +0.0 1,414,404 - QEN71_RS35795 0.24 -0.6 1,414,404 - QEN71_RS35795 0.24 +1.2 1,414,404 - QEN71_RS35795 0.24 +0.2 1,414,404 - QEN71_RS35795 0.24 +0.1 1,414,415 + QEN71_RS35795 0.25 -0.5 1,414,416 - QEN71_RS35795 0.25 +0.2 1,414,511 + QEN71_RS35795 0.31 -0.2 1,414,511 + QEN71_RS35795 0.31 +0.3 1,414,512 - QEN71_RS35795 0.31 +0.2 1,414,512 - QEN71_RS35795 0.31 -0.8 1,414,544 - QEN71_RS35795 0.33 +0.2 1,414,685 + QEN71_RS35795 0.41 -1.7 1,414,686 - QEN71_RS35795 0.41 -0.8 1,414,724 + QEN71_RS35795 0.44 -0.2 1,414,724 + QEN71_RS35795 0.44 +0.4 1,414,724 + QEN71_RS35795 0.44 -0.5 1,414,724 + QEN71_RS35795 0.44 +1.7 1,414,724 + QEN71_RS35795 0.44 -3.0 1,414,724 + QEN71_RS35795 0.44 +0.2 1,414,725 - QEN71_RS35795 0.44 -0.3 1,414,725 - QEN71_RS35795 0.44 +0.6 1,414,733 + QEN71_RS35795 0.44 -0.9 1,414,733 + QEN71_RS35795 0.44 +0.9 1,414,734 - QEN71_RS35795 0.44 +1.1 1,414,757 + QEN71_RS35795 0.46 +0.2 1,414,757 + QEN71_RS35795 0.46 +0.2 1,414,757 + QEN71_RS35795 0.46 +0.2 1,414,757 + QEN71_RS35795 0.46 -0.8 1,414,757 + QEN71_RS35795 0.46 +0.4 1,414,758 - QEN71_RS35795 0.46 +0.2 1,414,758 - QEN71_RS35795 0.46 -0.3 1,414,758 - QEN71_RS35795 0.46 -0.3
Or see this region's nucleotide sequence