Experiment: 2-Deoxy-D-Ribose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS25930 and QEN71_RS25935 are separated by 226 nucleotides QEN71_RS25935 and QEN71_RS25940 are separated by 260 nucleotides
QEN71_RS25930: QEN71_RS25930 - sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC, at 5,775,771 to 5,776,922
_RS25930
QEN71_RS25935: QEN71_RS25935 - LacI family DNA-binding transcriptional regulator, at 5,777,149 to 5,778,183
_RS25935
QEN71_RS25940: QEN71_RS25940 - MerR family transcriptional regulator, at 5,778,444 to 5,779,427
_RS25940
Position (kb) 5777
5778
5779 Strain fitness (log2 ratio) -1
0
1 at 5776.232 kb on - strand, within QEN71_RS25930 at 5776.351 kb on + strand, within QEN71_RS25930 at 5776.351 kb on + strand, within QEN71_RS25930 at 5776.352 kb on - strand, within QEN71_RS25930 at 5776.352 kb on - strand, within QEN71_RS25930 at 5776.670 kb on - strand, within QEN71_RS25930 at 5776.885 kb on + strand at 5776.941 kb on + strand at 5776.941 kb on + strand at 5776.941 kb on + strand at 5777.128 kb on - strand at 5777.134 kb on + strand at 5777.255 kb on + strand, within QEN71_RS25935 at 5777.281 kb on + strand, within QEN71_RS25935 at 5777.282 kb on - strand, within QEN71_RS25935 at 5777.406 kb on + strand, within QEN71_RS25935 at 5777.407 kb on - strand, within QEN71_RS25935 at 5777.407 kb on - strand, within QEN71_RS25935 at 5777.467 kb on + strand, within QEN71_RS25935 at 5777.468 kb on - strand, within QEN71_RS25935 at 5777.468 kb on - strand, within QEN71_RS25935 at 5777.737 kb on + strand, within QEN71_RS25935 at 5777.812 kb on - strand, within QEN71_RS25935 at 5777.868 kb on - strand, within QEN71_RS25935 at 5778.181 kb on + strand at 5778.210 kb on - strand at 5778.349 kb on - strand at 5778.408 kb on + strand at 5778.552 kb on + strand, within QEN71_RS25940 at 5778.572 kb on + strand, within QEN71_RS25940 at 5778.597 kb on + strand, within QEN71_RS25940 at 5778.597 kb on + strand, within QEN71_RS25940 at 5778.599 kb on + strand, within QEN71_RS25940 at 5778.599 kb on + strand, within QEN71_RS25940 at 5779.002 kb on + strand, within QEN71_RS25940 at 5779.002 kb on + strand, within QEN71_RS25940 at 5779.003 kb on - strand, within QEN71_RS25940 at 5779.173 kb on + strand, within QEN71_RS25940 at 5779.173 kb on + strand, within QEN71_RS25940
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-Ribose (C) remove 5,776,232 - QEN71_RS25930 0.40 +0.1 5,776,351 + QEN71_RS25930 0.50 +0.2 5,776,351 + QEN71_RS25930 0.50 +1.0 5,776,352 - QEN71_RS25930 0.50 +0.0 5,776,352 - QEN71_RS25930 0.50 -0.5 5,776,670 - QEN71_RS25930 0.78 -0.4 5,776,885 + +0.6 5,776,941 + -0.0 5,776,941 + -0.8 5,776,941 + -0.5 5,777,128 - -0.1 5,777,134 + -0.1 5,777,255 + QEN71_RS25935 0.10 +1.4 5,777,281 + QEN71_RS25935 0.13 -0.4 5,777,282 - QEN71_RS25935 0.13 +0.6 5,777,406 + QEN71_RS25935 0.25 +0.0 5,777,407 - QEN71_RS25935 0.25 +0.1 5,777,407 - QEN71_RS25935 0.25 -0.3 5,777,467 + QEN71_RS25935 0.31 -0.2 5,777,468 - QEN71_RS25935 0.31 -0.8 5,777,468 - QEN71_RS25935 0.31 -0.1 5,777,737 + QEN71_RS25935 0.57 +0.2 5,777,812 - QEN71_RS25935 0.64 -1.5 5,777,868 - QEN71_RS25935 0.69 -0.4 5,778,181 + -0.4 5,778,210 - +0.3 5,778,349 - -0.3 5,778,408 + +0.7 5,778,552 + QEN71_RS25940 0.11 +0.5 5,778,572 + QEN71_RS25940 0.13 -0.2 5,778,597 + QEN71_RS25940 0.16 -0.2 5,778,597 + QEN71_RS25940 0.16 -0.3 5,778,599 + QEN71_RS25940 0.16 -0.2 5,778,599 + QEN71_RS25940 0.16 -0.1 5,779,002 + QEN71_RS25940 0.57 -0.7 5,779,002 + QEN71_RS25940 0.57 +0.1 5,779,003 - QEN71_RS25940 0.57 +0.8 5,779,173 + QEN71_RS25940 0.74 +1.3 5,779,173 + QEN71_RS25940 0.74 -0.3
Or see this region's nucleotide sequence