Experiment: 2-Deoxy-D-Ribose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS25290 and QEN71_RS25295 are separated by 605 nucleotides QEN71_RS25295 and QEN71_RS25300 overlap by 20 nucleotides
QEN71_RS25290: QEN71_RS25290 - substrate-binding domain-containing protein, at 5,626,560 to 5,627,528
_RS25290
QEN71_RS25295: QEN71_RS25295 - ABC transporter permease, at 5,628,134 to 5,629,147
_RS25295
QEN71_RS25300: QEN71_RS25300 - sugar ABC transporter ATP-binding protein, at 5,629,128 to 5,630,615
_RS25300
Position (kb) 5628
5629
5630 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5627.173 kb on + strand, within QEN71_RS25290 at 5627.173 kb on + strand, within QEN71_RS25290 at 5627.212 kb on - strand, within QEN71_RS25290 at 5627.319 kb on + strand, within QEN71_RS25290 at 5627.322 kb on + strand, within QEN71_RS25290 at 5627.323 kb on - strand, within QEN71_RS25290 at 5627.433 kb on + strand at 5627.505 kb on + strand at 5627.506 kb on - strand at 5627.824 kb on - strand at 5627.943 kb on - strand at 5628.095 kb on + strand at 5628.095 kb on + strand at 5628.232 kb on + strand at 5628.232 kb on + strand at 5628.233 kb on - strand at 5628.233 kb on - strand at 5628.235 kb on + strand at 5628.265 kb on + strand, within QEN71_RS25295 at 5628.266 kb on - strand, within QEN71_RS25295 at 5628.266 kb on - strand, within QEN71_RS25295 at 5628.332 kb on - strand, within QEN71_RS25295 at 5628.358 kb on + strand, within QEN71_RS25295 at 5628.361 kb on + strand, within QEN71_RS25295 at 5628.362 kb on - strand, within QEN71_RS25295 at 5628.362 kb on - strand, within QEN71_RS25295 at 5628.390 kb on + strand, within QEN71_RS25295 at 5628.390 kb on + strand, within QEN71_RS25295 at 5628.390 kb on + strand, within QEN71_RS25295 at 5628.390 kb on + strand, within QEN71_RS25295 at 5628.391 kb on - strand, within QEN71_RS25295 at 5628.391 kb on - strand, within QEN71_RS25295 at 5628.391 kb on - strand, within QEN71_RS25295 at 5628.391 kb on - strand, within QEN71_RS25295 at 5628.391 kb on - strand, within QEN71_RS25295 at 5628.400 kb on + strand, within QEN71_RS25295 at 5628.401 kb on - strand, within QEN71_RS25295 at 5628.432 kb on + strand, within QEN71_RS25295 at 5628.433 kb on - strand, within QEN71_RS25295 at 5628.606 kb on + strand, within QEN71_RS25295 at 5628.622 kb on - strand, within QEN71_RS25295 at 5628.640 kb on + strand, within QEN71_RS25295 at 5628.743 kb on - strand, within QEN71_RS25295 at 5628.935 kb on - strand, within QEN71_RS25295 at 5628.935 kb on - strand, within QEN71_RS25295 at 5629.234 kb on - strand at 5629.234 kb on - strand at 5629.312 kb on + strand, within QEN71_RS25300 at 5629.313 kb on - strand, within QEN71_RS25300 at 5629.618 kb on + strand, within QEN71_RS25300 at 5630.032 kb on + strand, within QEN71_RS25300 at 5630.032 kb on + strand, within QEN71_RS25300
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-Ribose (C) remove 5,627,173 + QEN71_RS25290 0.63 +0.2 5,627,173 + QEN71_RS25290 0.63 -0.3 5,627,212 - QEN71_RS25290 0.67 +0.1 5,627,319 + QEN71_RS25290 0.78 -0.5 5,627,322 + QEN71_RS25290 0.79 +0.5 5,627,323 - QEN71_RS25290 0.79 +0.6 5,627,433 + -0.5 5,627,505 + +0.5 5,627,506 - +0.4 5,627,824 - -0.8 5,627,943 - +1.1 5,628,095 + -0.8 5,628,095 + +1.4 5,628,232 + -1.9 5,628,232 + -0.9 5,628,233 - -1.0 5,628,233 - +0.0 5,628,235 + -0.1 5,628,265 + QEN71_RS25295 0.13 +0.2 5,628,266 - QEN71_RS25295 0.13 -0.4 5,628,266 - QEN71_RS25295 0.13 +0.3 5,628,332 - QEN71_RS25295 0.20 -0.4 5,628,358 + QEN71_RS25295 0.22 -0.4 5,628,361 + QEN71_RS25295 0.22 -0.2 5,628,362 - QEN71_RS25295 0.22 -0.1 5,628,362 - QEN71_RS25295 0.22 -1.0 5,628,390 + QEN71_RS25295 0.25 -1.3 5,628,390 + QEN71_RS25295 0.25 +2.0 5,628,390 + QEN71_RS25295 0.25 -0.3 5,628,390 + QEN71_RS25295 0.25 -0.3 5,628,391 - QEN71_RS25295 0.25 +0.1 5,628,391 - QEN71_RS25295 0.25 +0.7 5,628,391 - QEN71_RS25295 0.25 +1.0 5,628,391 - QEN71_RS25295 0.25 +0.9 5,628,391 - QEN71_RS25295 0.25 +0.0 5,628,400 + QEN71_RS25295 0.26 -0.3 5,628,401 - QEN71_RS25295 0.26 -0.0 5,628,432 + QEN71_RS25295 0.29 -0.8 5,628,433 - QEN71_RS25295 0.29 +0.9 5,628,606 + QEN71_RS25295 0.47 -1.5 5,628,622 - QEN71_RS25295 0.48 -0.0 5,628,640 + QEN71_RS25295 0.50 -0.4 5,628,743 - QEN71_RS25295 0.60 +1.6 5,628,935 - QEN71_RS25295 0.79 -0.3 5,628,935 - QEN71_RS25295 0.79 -0.1 5,629,234 - -0.9 5,629,234 - -0.3 5,629,312 + QEN71_RS25300 0.12 +0.4 5,629,313 - QEN71_RS25300 0.12 -0.0 5,629,618 + QEN71_RS25300 0.33 -0.4 5,630,032 + QEN71_RS25300 0.61 -0.7 5,630,032 + QEN71_RS25300 0.61 +1.6
Or see this region's nucleotide sequence