Experiment: 2-Deoxy-D-Ribose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS25215 and QEN71_RS25220 are separated by 50 nucleotides QEN71_RS25220 and QEN71_RS25225 are separated by 582 nucleotides
QEN71_RS25215: QEN71_RS25215 - LPS export ABC transporter permease LptG, at 5,610,592 to 5,611,740
_RS25215
QEN71_RS25220: QEN71_RS25220 - CbiX/SirB N-terminal domain-containing protein, at 5,611,791 to 5,612,168
_RS25220
QEN71_RS25225: QEN71_RS25225 - class A beta-lactamase, at 5,612,751 to 5,613,644
_RS25225
Position (kb) 5611
5612
5613 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 5611.739 kb on - strand at 5612.028 kb on - strand, within QEN71_RS25220 at 5612.028 kb on - strand, within QEN71_RS25220 at 5612.028 kb on - strand, within QEN71_RS25220 at 5612.230 kb on - strand at 5612.336 kb on - strand at 5612.382 kb on + strand at 5612.437 kb on + strand at 5612.437 kb on + strand at 5612.437 kb on + strand at 5612.795 kb on + strand at 5612.796 kb on - strand at 5612.796 kb on - strand at 5612.819 kb on + strand at 5612.839 kb on + strand at 5612.839 kb on + strand at 5612.839 kb on + strand at 5612.840 kb on - strand at 5612.840 kb on - strand at 5612.840 kb on - strand at 5612.840 kb on - strand at 5612.840 kb on - strand at 5612.840 kb on - strand at 5612.840 kb on - strand at 5612.840 kb on - strand at 5612.840 kb on - strand at 5612.840 kb on - strand at 5612.840 kb on - strand at 5612.855 kb on - strand, within QEN71_RS25225 at 5612.855 kb on - strand, within QEN71_RS25225 at 5612.872 kb on + strand, within QEN71_RS25225 at 5612.873 kb on - strand, within QEN71_RS25225 at 5612.873 kb on - strand, within QEN71_RS25225 at 5612.873 kb on - strand, within QEN71_RS25225 at 5612.873 kb on - strand, within QEN71_RS25225 at 5612.873 kb on - strand, within QEN71_RS25225 at 5612.873 kb on - strand, within QEN71_RS25225 at 5612.873 kb on - strand, within QEN71_RS25225 at 5612.902 kb on + strand, within QEN71_RS25225 at 5612.902 kb on + strand, within QEN71_RS25225 at 5612.903 kb on - strand, within QEN71_RS25225 at 5612.903 kb on - strand, within QEN71_RS25225 at 5612.949 kb on + strand, within QEN71_RS25225 at 5612.950 kb on - strand, within QEN71_RS25225 at 5612.950 kb on - strand, within QEN71_RS25225 at 5612.950 kb on - strand, within QEN71_RS25225 at 5612.981 kb on + strand, within QEN71_RS25225 at 5612.981 kb on + strand, within QEN71_RS25225 at 5612.982 kb on - strand, within QEN71_RS25225 at 5613.089 kb on + strand, within QEN71_RS25225 at 5613.090 kb on - strand, within QEN71_RS25225 at 5613.155 kb on + strand, within QEN71_RS25225 at 5613.155 kb on + strand, within QEN71_RS25225 at 5613.155 kb on + strand, within QEN71_RS25225 at 5613.156 kb on - strand, within QEN71_RS25225 at 5613.156 kb on - strand, within QEN71_RS25225 at 5613.156 kb on - strand, within QEN71_RS25225 at 5613.156 kb on - strand, within QEN71_RS25225 at 5613.156 kb on - strand, within QEN71_RS25225
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-Ribose (C) remove 5,611,739 - -0.4 5,612,028 - QEN71_RS25220 0.63 -0.9 5,612,028 - QEN71_RS25220 0.63 -2.8 5,612,028 - QEN71_RS25220 0.63 -2.3 5,612,230 - -0.8 5,612,336 - +0.2 5,612,382 + -0.3 5,612,437 + -0.2 5,612,437 + +0.4 5,612,437 + +3.0 5,612,795 + -0.8 5,612,796 - +0.2 5,612,796 - +0.1 5,612,819 + -0.2 5,612,839 + -0.5 5,612,839 + +0.1 5,612,839 + +0.8 5,612,840 - +0.3 5,612,840 - -0.7 5,612,840 - -0.2 5,612,840 - +0.8 5,612,840 - -0.3 5,612,840 - +0.1 5,612,840 - -1.3 5,612,840 - -0.4 5,612,840 - +0.5 5,612,840 - -1.0 5,612,840 - -0.5 5,612,855 - QEN71_RS25225 0.12 -0.8 5,612,855 - QEN71_RS25225 0.12 -1.8 5,612,872 + QEN71_RS25225 0.14 -1.9 5,612,873 - QEN71_RS25225 0.14 -0.9 5,612,873 - QEN71_RS25225 0.14 +0.9 5,612,873 - QEN71_RS25225 0.14 -0.2 5,612,873 - QEN71_RS25225 0.14 +0.2 5,612,873 - QEN71_RS25225 0.14 -0.9 5,612,873 - QEN71_RS25225 0.14 +0.5 5,612,873 - QEN71_RS25225 0.14 -0.1 5,612,902 + QEN71_RS25225 0.17 -0.1 5,612,902 + QEN71_RS25225 0.17 -0.2 5,612,903 - QEN71_RS25225 0.17 -1.7 5,612,903 - QEN71_RS25225 0.17 +0.3 5,612,949 + QEN71_RS25225 0.22 -0.1 5,612,950 - QEN71_RS25225 0.22 -0.1 5,612,950 - QEN71_RS25225 0.22 -0.3 5,612,950 - QEN71_RS25225 0.22 -0.2 5,612,981 + QEN71_RS25225 0.26 -0.9 5,612,981 + QEN71_RS25225 0.26 -0.6 5,612,982 - QEN71_RS25225 0.26 -0.3 5,613,089 + QEN71_RS25225 0.38 +1.0 5,613,090 - QEN71_RS25225 0.38 +0.4 5,613,155 + QEN71_RS25225 0.45 +0.6 5,613,155 + QEN71_RS25225 0.45 -1.6 5,613,155 + QEN71_RS25225 0.45 -2.6 5,613,156 - QEN71_RS25225 0.45 +1.4 5,613,156 - QEN71_RS25225 0.45 +0.7 5,613,156 - QEN71_RS25225 0.45 -0.2 5,613,156 - QEN71_RS25225 0.45 -0.5 5,613,156 - QEN71_RS25225 0.45 -1.0
Or see this region's nucleotide sequence