Experiment: 2-Deoxy-D-Ribose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS24825 and QEN71_RS24830 are separated by 22 nucleotides QEN71_RS24830 and QEN71_RS24835 are separated by 732 nucleotides
QEN71_RS24825: QEN71_RS24825 - nitrate/sulfonate/bicarbonate ABC transporter ATP-binding protein, at 5,520,185 to 5,521,531
_RS24825
QEN71_RS24830: QEN71_RS24830 - ABC transporter permease subunit, at 5,521,554 to 5,523,308
_RS24830
QEN71_RS24835: QEN71_RS24835 - sensor domain-containing diguanylate cyclase, at 5,524,041 to 5,525,720
_RS24835
Position (kb) 5521
5522
5523
5524 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 5520.604 kb on - strand, within QEN71_RS24825 at 5520.604 kb on - strand, within QEN71_RS24825 at 5520.670 kb on + strand, within QEN71_RS24825 at 5520.670 kb on + strand, within QEN71_RS24825 at 5520.670 kb on + strand, within QEN71_RS24825 at 5520.670 kb on + strand, within QEN71_RS24825 at 5520.670 kb on + strand, within QEN71_RS24825 at 5520.671 kb on - strand, within QEN71_RS24825 at 5520.671 kb on - strand, within QEN71_RS24825 at 5520.671 kb on - strand, within QEN71_RS24825 at 5520.671 kb on - strand, within QEN71_RS24825 at 5520.671 kb on - strand, within QEN71_RS24825 at 5520.729 kb on + strand, within QEN71_RS24825 at 5520.729 kb on + strand, within QEN71_RS24825 at 5520.729 kb on + strand, within QEN71_RS24825 at 5520.730 kb on - strand, within QEN71_RS24825 at 5520.940 kb on + strand, within QEN71_RS24825 at 5521.266 kb on + strand, within QEN71_RS24825 at 5521.266 kb on + strand, within QEN71_RS24825 at 5521.266 kb on + strand, within QEN71_RS24825 at 5521.267 kb on - strand, within QEN71_RS24825 at 5521.267 kb on - strand, within QEN71_RS24825 at 5521.537 kb on + strand at 5521.537 kb on + strand at 5521.538 kb on - strand at 5521.582 kb on + strand at 5521.589 kb on - strand at 5521.589 kb on - strand at 5521.589 kb on - strand at 5521.684 kb on + strand at 5521.685 kb on - strand at 5521.694 kb on + strand at 5521.696 kb on + strand at 5521.696 kb on + strand at 5521.696 kb on + strand at 5521.696 kb on + strand at 5521.696 kb on + strand at 5521.696 kb on + strand at 5521.697 kb on - strand at 5521.697 kb on - strand at 5521.804 kb on + strand, within QEN71_RS24830 at 5521.804 kb on + strand, within QEN71_RS24830 at 5521.805 kb on - strand, within QEN71_RS24830 at 5521.805 kb on - strand, within QEN71_RS24830 at 5521.886 kb on - strand, within QEN71_RS24830 at 5521.886 kb on - strand, within QEN71_RS24830 at 5521.933 kb on + strand, within QEN71_RS24830 at 5521.933 kb on + strand, within QEN71_RS24830 at 5521.933 kb on + strand, within QEN71_RS24830 at 5521.933 kb on + strand, within QEN71_RS24830 at 5521.934 kb on - strand, within QEN71_RS24830 at 5521.934 kb on - strand, within QEN71_RS24830 at 5521.934 kb on - strand, within QEN71_RS24830 at 5521.934 kb on - strand, within QEN71_RS24830 at 5521.934 kb on - strand, within QEN71_RS24830 at 5521.934 kb on - strand, within QEN71_RS24830 at 5521.934 kb on - strand, within QEN71_RS24830 at 5522.224 kb on + strand, within QEN71_RS24830 at 5522.224 kb on + strand, within QEN71_RS24830 at 5522.224 kb on + strand, within QEN71_RS24830 at 5522.225 kb on - strand, within QEN71_RS24830 at 5522.225 kb on - strand, within QEN71_RS24830 at 5522.225 kb on - strand, within QEN71_RS24830 at 5522.240 kb on - strand, within QEN71_RS24830 at 5522.534 kb on - strand, within QEN71_RS24830 at 5522.953 kb on + strand, within QEN71_RS24830 at 5522.954 kb on - strand, within QEN71_RS24830 at 5522.954 kb on - strand, within QEN71_RS24830 at 5523.095 kb on + strand, within QEN71_RS24830 at 5523.095 kb on + strand, within QEN71_RS24830 at 5523.096 kb on - strand, within QEN71_RS24830 at 5523.096 kb on - strand, within QEN71_RS24830 at 5523.099 kb on + strand, within QEN71_RS24830 at 5523.099 kb on + strand, within QEN71_RS24830 at 5523.099 kb on + strand, within QEN71_RS24830 at 5523.099 kb on + strand, within QEN71_RS24830 at 5523.100 kb on - strand, within QEN71_RS24830 at 5523.106 kb on + strand, within QEN71_RS24830 at 5523.472 kb on + strand at 5523.472 kb on + strand at 5523.473 kb on - strand at 5523.473 kb on - strand at 5523.493 kb on + strand at 5523.493 kb on + strand at 5523.493 kb on + strand at 5523.494 kb on - strand at 5523.494 kb on - strand at 5523.494 kb on - strand at 5523.494 kb on - strand at 5523.494 kb on - strand at 5523.494 kb on - strand at 5523.494 kb on - strand at 5523.494 kb on - strand at 5523.494 kb on - strand at 5523.603 kb on + strand at 5523.603 kb on + strand at 5523.604 kb on - strand at 5523.604 kb on - strand at 5523.604 kb on - strand at 5523.604 kb on - strand at 5523.604 kb on - strand at 5523.604 kb on - strand at 5523.604 kb on - strand at 5523.604 kb on - strand at 5523.604 kb on - strand at 5523.604 kb on - strand at 5523.604 kb on - strand at 5523.604 kb on - strand at 5523.604 kb on - strand at 5523.606 kb on + strand at 5523.606 kb on + strand at 5523.606 kb on + strand at 5523.606 kb on + strand at 5523.606 kb on + strand at 5523.606 kb on + strand at 5523.606 kb on + strand at 5523.606 kb on + strand at 5523.607 kb on - strand at 5523.607 kb on - strand at 5523.607 kb on - strand at 5523.607 kb on - strand at 5523.607 kb on - strand at 5523.607 kb on - strand at 5523.607 kb on - strand at 5523.607 kb on - strand at 5523.607 kb on - strand at 5523.607 kb on - strand at 5523.607 kb on - strand at 5523.607 kb on - strand at 5523.607 kb on - strand at 5523.607 kb on - strand at 5523.607 kb on - strand at 5523.676 kb on + strand at 5523.676 kb on + strand at 5523.676 kb on + strand at 5523.676 kb on + strand at 5523.677 kb on - strand at 5523.677 kb on - strand at 5523.677 kb on - strand at 5523.677 kb on - strand at 5523.677 kb on - strand at 5523.677 kb on - strand at 5523.780 kb on + strand at 5523.807 kb on + strand at 5523.807 kb on + strand at 5523.808 kb on - strand at 5523.808 kb on - strand at 5523.810 kb on + strand at 5523.810 kb on + strand at 5523.811 kb on - strand at 5523.811 kb on - strand at 5523.931 kb on + strand at 5523.931 kb on + strand at 5523.931 kb on + strand at 5523.932 kb on - strand at 5524.087 kb on + strand at 5524.141 kb on + strand at 5524.141 kb on + strand at 5524.141 kb on + strand at 5524.141 kb on + strand at 5524.142 kb on - strand at 5524.200 kb on + strand at 5524.201 kb on - strand at 5524.201 kb on - strand at 5524.201 kb on - strand at 5524.201 kb on - strand at 5524.249 kb on + strand, within QEN71_RS24835 at 5524.308 kb on + strand, within QEN71_RS24835 at 5524.308 kb on + strand, within QEN71_RS24835 at 5524.308 kb on + strand, within QEN71_RS24835 at 5524.308 kb on + strand, within QEN71_RS24835
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-Ribose (C) remove 5,520,604 - QEN71_RS24825 0.31 +0.7 5,520,604 - QEN71_RS24825 0.31 +0.8 5,520,670 + QEN71_RS24825 0.36 +0.2 5,520,670 + QEN71_RS24825 0.36 -0.0 5,520,670 + QEN71_RS24825 0.36 -0.8 5,520,670 + QEN71_RS24825 0.36 +2.0 5,520,670 + QEN71_RS24825 0.36 -0.3 5,520,671 - QEN71_RS24825 0.36 +1.3 5,520,671 - QEN71_RS24825 0.36 -1.3 5,520,671 - QEN71_RS24825 0.36 -0.6 5,520,671 - QEN71_RS24825 0.36 -0.8 5,520,671 - QEN71_RS24825 0.36 +1.6 5,520,729 + QEN71_RS24825 0.40 -0.0 5,520,729 + QEN71_RS24825 0.40 -0.1 5,520,729 + QEN71_RS24825 0.40 +1.4 5,520,730 - QEN71_RS24825 0.40 +0.6 5,520,940 + QEN71_RS24825 0.56 -2.3 5,521,266 + QEN71_RS24825 0.80 -0.0 5,521,266 + QEN71_RS24825 0.80 +1.6 5,521,266 + QEN71_RS24825 0.80 -0.0 5,521,267 - QEN71_RS24825 0.80 +0.2 5,521,267 - QEN71_RS24825 0.80 -0.0 5,521,537 + +2.0 5,521,537 + -0.6 5,521,538 - -0.1 5,521,582 + +0.8 5,521,589 - +1.7 5,521,589 - -0.3 5,521,589 - +1.0 5,521,684 + +2.0 5,521,685 - -1.3 5,521,694 + -0.6 5,521,696 + +1.4 5,521,696 + -0.0 5,521,696 + +1.6 5,521,696 + +1.4 5,521,696 + +1.2 5,521,696 + +1.0 5,521,697 - -1.0 5,521,697 - -0.0 5,521,804 + QEN71_RS24830 0.14 -0.3 5,521,804 + QEN71_RS24830 0.14 +2.0 5,521,805 - QEN71_RS24830 0.14 -0.8 5,521,805 - QEN71_RS24830 0.14 -2.1 5,521,886 - QEN71_RS24830 0.19 -1.5 5,521,886 - QEN71_RS24830 0.19 +0.2 5,521,933 + QEN71_RS24830 0.22 -0.5 5,521,933 + QEN71_RS24830 0.22 -0.6 5,521,933 + QEN71_RS24830 0.22 +0.7 5,521,933 + QEN71_RS24830 0.22 +0.6 5,521,934 - QEN71_RS24830 0.22 -0.0 5,521,934 - QEN71_RS24830 0.22 -1.1 5,521,934 - QEN71_RS24830 0.22 -0.3 5,521,934 - QEN71_RS24830 0.22 +1.6 5,521,934 - QEN71_RS24830 0.22 -0.6 5,521,934 - QEN71_RS24830 0.22 -0.0 5,521,934 - QEN71_RS24830 0.22 -0.6 5,522,224 + QEN71_RS24830 0.38 -0.2 5,522,224 + QEN71_RS24830 0.38 +0.7 5,522,224 + QEN71_RS24830 0.38 -0.0 5,522,225 - QEN71_RS24830 0.38 -0.6 5,522,225 - QEN71_RS24830 0.38 -0.0 5,522,225 - QEN71_RS24830 0.38 -0.0 5,522,240 - QEN71_RS24830 0.39 +0.2 5,522,534 - QEN71_RS24830 0.56 -0.2 5,522,953 + QEN71_RS24830 0.80 -0.6 5,522,954 - QEN71_RS24830 0.80 +1.0 5,522,954 - QEN71_RS24830 0.80 -1.8 5,523,095 + QEN71_RS24830 0.88 -0.6 5,523,095 + QEN71_RS24830 0.88 +0.8 5,523,096 - QEN71_RS24830 0.88 -0.6 5,523,096 - QEN71_RS24830 0.88 +0.2 5,523,099 + QEN71_RS24830 0.88 +1.5 5,523,099 + QEN71_RS24830 0.88 -0.5 5,523,099 + QEN71_RS24830 0.88 -0.3 5,523,099 + QEN71_RS24830 0.88 -1.5 5,523,100 - QEN71_RS24830 0.88 -0.8 5,523,106 + QEN71_RS24830 0.88 -0.6 5,523,472 + +1.8 5,523,472 + -1.0 5,523,473 - -0.3 5,523,473 - -0.4 5,523,493 + -0.0 5,523,493 + +0.2 5,523,493 + -0.6 5,523,494 - +1.6 5,523,494 - -0.6 5,523,494 - -0.6 5,523,494 - -0.4 5,523,494 - -0.5 5,523,494 - +0.2 5,523,494 - -0.5 5,523,494 - -0.0 5,523,494 - -0.3 5,523,603 + -0.2 5,523,603 + -0.1 5,523,604 - -1.2 5,523,604 - -1.3 5,523,604 - -0.9 5,523,604 - -0.8 5,523,604 - -0.3 5,523,604 - -0.3 5,523,604 - -0.4 5,523,604 - -0.7 5,523,604 - -0.5 5,523,604 - -0.3 5,523,604 - -0.2 5,523,604 - -0.4 5,523,604 - -0.7 5,523,606 + +1.2 5,523,606 + -0.3 5,523,606 + -0.4 5,523,606 + +0.2 5,523,606 + +0.3 5,523,606 + +1.0 5,523,606 + +0.4 5,523,606 + +2.0 5,523,607 - -0.4 5,523,607 - -0.7 5,523,607 - +1.1 5,523,607 - -0.5 5,523,607 - -0.6 5,523,607 - -0.5 5,523,607 - -0.4 5,523,607 - -0.6 5,523,607 - -0.2 5,523,607 - -0.4 5,523,607 - -0.6 5,523,607 - -0.5 5,523,607 - +0.2 5,523,607 - -0.7 5,523,607 - -0.8 5,523,676 + -0.6 5,523,676 + -0.1 5,523,676 + +0.5 5,523,676 + +0.5 5,523,677 - -0.8 5,523,677 - -0.9 5,523,677 - -1.5 5,523,677 - -0.5 5,523,677 - -0.9 5,523,677 - -1.0 5,523,780 + -0.7 5,523,807 + +1.1 5,523,807 + +1.1 5,523,808 - -0.8 5,523,808 - -1.2 5,523,810 + -3.0 5,523,810 + +1.4 5,523,811 - -0.6 5,523,811 - -0.6 5,523,931 + -0.0 5,523,931 + -0.5 5,523,931 + -0.9 5,523,932 - +0.0 5,524,087 + -0.9 5,524,141 + -1.0 5,524,141 + -0.3 5,524,141 + -0.4 5,524,141 + -0.8 5,524,142 - -0.5 5,524,200 + +0.5 5,524,201 - -0.2 5,524,201 - -0.3 5,524,201 - -0.4 5,524,201 - -1.7 5,524,249 + QEN71_RS24835 0.12 -1.0 5,524,308 + QEN71_RS24835 0.16 +1.0 5,524,308 + QEN71_RS24835 0.16 -0.1 5,524,308 + QEN71_RS24835 0.16 +0.4 5,524,308 + QEN71_RS24835 0.16 -1.5
Or see this region's nucleotide sequence