Experiment: 2-Deoxy-D-Ribose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS24250 and QEN71_RS24255 are separated by 19 nucleotides QEN71_RS24255 and QEN71_RS24260 are separated by 80 nucleotides
QEN71_RS24250: QEN71_RS24250 - ABC transporter permease, at 5,394,487 to 5,395,791
_RS24250
QEN71_RS24255: QEN71_RS24255 - sugar ABC transporter ATP-binding protein, at 5,395,811 to 5,397,376
_RS24255
QEN71_RS24260: QEN71_RS24260 - substrate-binding domain-containing protein, at 5,397,457 to 5,398,413
_RS24260
Position (kb) 5395
5396
5397
5398 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5394.831 kb on - strand, within QEN71_RS24250 at 5394.903 kb on - strand, within QEN71_RS24250 at 5394.903 kb on - strand, within QEN71_RS24250 at 5394.908 kb on + strand, within QEN71_RS24250 at 5394.908 kb on + strand, within QEN71_RS24250 at 5394.908 kb on + strand, within QEN71_RS24250 at 5394.908 kb on + strand, within QEN71_RS24250 at 5394.908 kb on + strand, within QEN71_RS24250 at 5394.909 kb on - strand, within QEN71_RS24250 at 5394.909 kb on - strand, within QEN71_RS24250 at 5394.909 kb on - strand, within QEN71_RS24250 at 5394.997 kb on + strand, within QEN71_RS24250 at 5394.997 kb on + strand, within QEN71_RS24250 at 5395.047 kb on - strand, within QEN71_RS24250 at 5395.055 kb on + strand, within QEN71_RS24250 at 5395.055 kb on + strand, within QEN71_RS24250 at 5395.056 kb on - strand, within QEN71_RS24250 at 5395.056 kb on - strand, within QEN71_RS24250 at 5395.093 kb on - strand, within QEN71_RS24250 at 5395.093 kb on - strand, within QEN71_RS24250 at 5395.344 kb on + strand, within QEN71_RS24250 at 5395.344 kb on + strand, within QEN71_RS24250 at 5395.344 kb on + strand, within QEN71_RS24250 at 5395.344 kb on + strand, within QEN71_RS24250 at 5395.344 kb on + strand, within QEN71_RS24250 at 5395.344 kb on + strand, within QEN71_RS24250 at 5395.344 kb on + strand, within QEN71_RS24250 at 5395.344 kb on + strand, within QEN71_RS24250 at 5395.345 kb on - strand, within QEN71_RS24250 at 5395.345 kb on - strand, within QEN71_RS24250 at 5395.345 kb on - strand, within QEN71_RS24250 at 5395.389 kb on + strand, within QEN71_RS24250 at 5395.389 kb on + strand, within QEN71_RS24250 at 5395.390 kb on - strand, within QEN71_RS24250 at 5395.391 kb on + strand, within QEN71_RS24250 at 5395.391 kb on + strand, within QEN71_RS24250 at 5395.391 kb on + strand, within QEN71_RS24250 at 5395.391 kb on + strand, within QEN71_RS24250 at 5395.391 kb on + strand, within QEN71_RS24250 at 5395.391 kb on + strand, within QEN71_RS24250 at 5395.391 kb on + strand, within QEN71_RS24250 at 5395.391 kb on + strand, within QEN71_RS24250 at 5395.391 kb on + strand, within QEN71_RS24250 at 5395.391 kb on + strand, within QEN71_RS24250 at 5395.392 kb on - strand, within QEN71_RS24250 at 5395.392 kb on - strand, within QEN71_RS24250 at 5395.392 kb on - strand, within QEN71_RS24250 at 5395.392 kb on - strand, within QEN71_RS24250 at 5395.392 kb on - strand, within QEN71_RS24250 at 5395.392 kb on - strand, within QEN71_RS24250 at 5395.392 kb on - strand, within QEN71_RS24250 at 5395.392 kb on - strand, within QEN71_RS24250 at 5395.392 kb on - strand, within QEN71_RS24250 at 5395.675 kb on + strand at 5395.675 kb on + strand at 5395.675 kb on + strand at 5395.676 kb on - strand at 5395.676 kb on - strand at 5395.676 kb on - strand at 5395.691 kb on + strand at 5395.692 kb on - strand at 5395.692 kb on - strand at 5395.694 kb on + strand at 5395.694 kb on + strand at 5395.694 kb on + strand at 5395.694 kb on + strand at 5395.695 kb on - strand at 5395.695 kb on - strand at 5395.987 kb on + strand, within QEN71_RS24255 at 5395.989 kb on + strand, within QEN71_RS24255 at 5395.989 kb on + strand, within QEN71_RS24255 at 5395.989 kb on + strand, within QEN71_RS24255 at 5395.990 kb on - strand, within QEN71_RS24255 at 5395.990 kb on - strand, within QEN71_RS24255 at 5396.196 kb on + strand, within QEN71_RS24255 at 5396.197 kb on - strand, within QEN71_RS24255 at 5396.215 kb on + strand, within QEN71_RS24255 at 5396.411 kb on + strand, within QEN71_RS24255 at 5396.411 kb on + strand, within QEN71_RS24255 at 5396.412 kb on - strand, within QEN71_RS24255 at 5397.107 kb on - strand, within QEN71_RS24255 at 5397.107 kb on - strand, within QEN71_RS24255 at 5397.107 kb on - strand, within QEN71_RS24255 at 5397.128 kb on + strand, within QEN71_RS24255 at 5397.136 kb on + strand, within QEN71_RS24255 at 5397.136 kb on + strand, within QEN71_RS24255 at 5397.137 kb on - strand, within QEN71_RS24255 at 5397.137 kb on - strand, within QEN71_RS24255 at 5397.157 kb on - strand, within QEN71_RS24255 at 5397.170 kb on + strand, within QEN71_RS24255 at 5397.171 kb on - strand, within QEN71_RS24255 at 5397.588 kb on - strand, within QEN71_RS24260 at 5397.705 kb on - strand, within QEN71_RS24260 at 5397.713 kb on + strand, within QEN71_RS24260 at 5397.782 kb on + strand, within QEN71_RS24260 at 5397.783 kb on - strand, within QEN71_RS24260 at 5397.783 kb on - strand, within QEN71_RS24260 at 5397.783 kb on - strand, within QEN71_RS24260 at 5397.788 kb on + strand, within QEN71_RS24260 at 5397.788 kb on + strand, within QEN71_RS24260 at 5397.788 kb on + strand, within QEN71_RS24260 at 5397.927 kb on + strand, within QEN71_RS24260 at 5398.026 kb on - strand, within QEN71_RS24260 at 5398.079 kb on + strand, within QEN71_RS24260 at 5398.080 kb on - strand, within QEN71_RS24260 at 5398.080 kb on - strand, within QEN71_RS24260 at 5398.313 kb on + strand, within QEN71_RS24260 at 5398.337 kb on + strand at 5398.337 kb on + strand at 5398.338 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-Ribose (C) remove 5,394,831 - QEN71_RS24250 0.26 +0.7 5,394,903 - QEN71_RS24250 0.32 +1.2 5,394,903 - QEN71_RS24250 0.32 +1.1 5,394,908 + QEN71_RS24250 0.32 +2.0 5,394,908 + QEN71_RS24250 0.32 +1.4 5,394,908 + QEN71_RS24250 0.32 +0.3 5,394,908 + QEN71_RS24250 0.32 -0.2 5,394,908 + QEN71_RS24250 0.32 -0.3 5,394,909 - QEN71_RS24250 0.32 -0.2 5,394,909 - QEN71_RS24250 0.32 +1.8 5,394,909 - QEN71_RS24250 0.32 -2.1 5,394,997 + QEN71_RS24250 0.39 -0.2 5,394,997 + QEN71_RS24250 0.39 -0.3 5,395,047 - QEN71_RS24250 0.43 -0.6 5,395,055 + QEN71_RS24250 0.44 +0.6 5,395,055 + QEN71_RS24250 0.44 +0.1 5,395,056 - QEN71_RS24250 0.44 +0.3 5,395,056 - QEN71_RS24250 0.44 +0.4 5,395,093 - QEN71_RS24250 0.46 -0.5 5,395,093 - QEN71_RS24250 0.46 +0.7 5,395,344 + QEN71_RS24250 0.66 -0.6 5,395,344 + QEN71_RS24250 0.66 -0.6 5,395,344 + QEN71_RS24250 0.66 -0.1 5,395,344 + QEN71_RS24250 0.66 -0.1 5,395,344 + QEN71_RS24250 0.66 -0.8 5,395,344 + QEN71_RS24250 0.66 +1.0 5,395,344 + QEN71_RS24250 0.66 -0.3 5,395,344 + QEN71_RS24250 0.66 -1.1 5,395,345 - QEN71_RS24250 0.66 -0.0 5,395,345 - QEN71_RS24250 0.66 -0.6 5,395,345 - QEN71_RS24250 0.66 -0.5 5,395,389 + QEN71_RS24250 0.69 -1.0 5,395,389 + QEN71_RS24250 0.69 +0.6 5,395,390 - QEN71_RS24250 0.69 +0.0 5,395,391 + QEN71_RS24250 0.69 +0.3 5,395,391 + QEN71_RS24250 0.69 +0.5 5,395,391 + QEN71_RS24250 0.69 +0.1 5,395,391 + QEN71_RS24250 0.69 +0.2 5,395,391 + QEN71_RS24250 0.69 -0.9 5,395,391 + QEN71_RS24250 0.69 +1.2 5,395,391 + QEN71_RS24250 0.69 +0.0 5,395,391 + QEN71_RS24250 0.69 +0.1 5,395,391 + QEN71_RS24250 0.69 +0.5 5,395,391 + QEN71_RS24250 0.69 +0.6 5,395,392 - QEN71_RS24250 0.69 +0.1 5,395,392 - QEN71_RS24250 0.69 -0.4 5,395,392 - QEN71_RS24250 0.69 +0.7 5,395,392 - QEN71_RS24250 0.69 -0.1 5,395,392 - QEN71_RS24250 0.69 +2.0 5,395,392 - QEN71_RS24250 0.69 -0.7 5,395,392 - QEN71_RS24250 0.69 -2.3 5,395,392 - QEN71_RS24250 0.69 +0.8 5,395,392 - QEN71_RS24250 0.69 +0.8 5,395,675 + -0.5 5,395,675 + +0.2 5,395,675 + +0.2 5,395,676 - +0.7 5,395,676 - -0.8 5,395,676 - -0.9 5,395,691 + -0.2 5,395,692 - -1.4 5,395,692 - -1.0 5,395,694 + +0.1 5,395,694 + +0.2 5,395,694 + -0.6 5,395,694 + -0.2 5,395,695 - +0.6 5,395,695 - +2.4 5,395,987 + QEN71_RS24255 0.11 +1.4 5,395,989 + QEN71_RS24255 0.11 -0.8 5,395,989 + QEN71_RS24255 0.11 +0.3 5,395,989 + QEN71_RS24255 0.11 +1.7 5,395,990 - QEN71_RS24255 0.11 +0.1 5,395,990 - QEN71_RS24255 0.11 +0.7 5,396,196 + QEN71_RS24255 0.25 +1.0 5,396,197 - QEN71_RS24255 0.25 -0.7 5,396,215 + QEN71_RS24255 0.26 -0.2 5,396,411 + QEN71_RS24255 0.38 -0.1 5,396,411 + QEN71_RS24255 0.38 -0.2 5,396,412 - QEN71_RS24255 0.38 +0.4 5,397,107 - QEN71_RS24255 0.83 +0.2 5,397,107 - QEN71_RS24255 0.83 +0.5 5,397,107 - QEN71_RS24255 0.83 +0.2 5,397,128 + QEN71_RS24255 0.84 +1.0 5,397,136 + QEN71_RS24255 0.85 +0.1 5,397,136 + QEN71_RS24255 0.85 -2.0 5,397,137 - QEN71_RS24255 0.85 -1.5 5,397,137 - QEN71_RS24255 0.85 -0.2 5,397,157 - QEN71_RS24255 0.86 +0.2 5,397,170 + QEN71_RS24255 0.87 -0.8 5,397,171 - QEN71_RS24255 0.87 +0.2 5,397,588 - QEN71_RS24260 0.14 +0.9 5,397,705 - QEN71_RS24260 0.26 -0.5 5,397,713 + QEN71_RS24260 0.27 +1.1 5,397,782 + QEN71_RS24260 0.34 +0.3 5,397,783 - QEN71_RS24260 0.34 -1.0 5,397,783 - QEN71_RS24260 0.34 +0.8 5,397,783 - QEN71_RS24260 0.34 +0.5 5,397,788 + QEN71_RS24260 0.35 -0.9 5,397,788 + QEN71_RS24260 0.35 +0.4 5,397,788 + QEN71_RS24260 0.35 +0.7 5,397,927 + QEN71_RS24260 0.49 +0.1 5,398,026 - QEN71_RS24260 0.59 +1.1 5,398,079 + QEN71_RS24260 0.65 +0.7 5,398,080 - QEN71_RS24260 0.65 -0.6 5,398,080 - QEN71_RS24260 0.65 -0.1 5,398,313 + QEN71_RS24260 0.89 -0.6 5,398,337 + +0.7 5,398,337 + -0.2 5,398,338 - -0.9
Or see this region's nucleotide sequence