Experiment: 2-Deoxy-D-Ribose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS23995 and QEN71_RS24000 are separated by 29 nucleotides QEN71_RS24000 and QEN71_RS24005 are separated by 57 nucleotides QEN71_RS24005 and QEN71_RS24010 are separated by 74 nucleotides
QEN71_RS23995: QEN71_RS23995 - M14-type cytosolic carboxypeptidase, at 5,342,668 to 5,343,834
_RS23995
QEN71_RS24000: QEN71_RS24000 - peroxide stress protein YaaA, at 5,343,864 to 5,344,646
_RS24000
QEN71_RS24005: QEN71_RS24005 - putative toxin-antitoxin system toxin component, PIN family, at 5,344,704 to 5,345,222
_RS24005
QEN71_RS24010: QEN71_RS24010 - pyridoxal phosphate-dependent aminotransferase, at 5,345,297 to 5,346,487
_RS24010
Position (kb) 5344
5345
5346 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5343.710 kb on + strand, within QEN71_RS23995 at 5343.710 kb on + strand, within QEN71_RS23995 at 5343.711 kb on - strand, within QEN71_RS23995 at 5343.711 kb on - strand, within QEN71_RS23995 at 5343.711 kb on - strand, within QEN71_RS23995 at 5343.711 kb on - strand, within QEN71_RS23995 at 5343.711 kb on - strand, within QEN71_RS23995 at 5343.711 kb on - strand, within QEN71_RS23995 at 5343.711 kb on - strand, within QEN71_RS23995 at 5343.819 kb on + strand at 5343.819 kb on + strand at 5343.819 kb on + strand at 5343.819 kb on + strand at 5343.820 kb on - strand at 5343.820 kb on - strand at 5343.820 kb on - strand at 5343.820 kb on - strand at 5343.892 kb on + strand at 5343.892 kb on + strand at 5343.892 kb on + strand at 5343.892 kb on + strand at 5343.893 kb on - strand at 5343.893 kb on - strand at 5343.893 kb on - strand at 5343.893 kb on - strand at 5343.893 kb on - strand at 5343.893 kb on - strand at 5343.893 kb on - strand at 5343.893 kb on - strand at 5343.893 kb on - strand at 5343.893 kb on - strand at 5343.893 kb on - strand at 5343.893 kb on - strand at 5343.893 kb on - strand at 5343.928 kb on + strand at 5343.929 kb on - strand at 5343.929 kb on - strand at 5343.989 kb on - strand, within QEN71_RS24000 at 5344.040 kb on - strand, within QEN71_RS24000 at 5344.040 kb on - strand, within QEN71_RS24000 at 5344.040 kb on - strand, within QEN71_RS24000 at 5344.117 kb on + strand, within QEN71_RS24000 at 5344.117 kb on + strand, within QEN71_RS24000 at 5344.117 kb on + strand, within QEN71_RS24000 at 5344.117 kb on + strand, within QEN71_RS24000 at 5344.216 kb on + strand, within QEN71_RS24000 at 5344.217 kb on - strand, within QEN71_RS24000 at 5344.217 kb on - strand, within QEN71_RS24000 at 5344.217 kb on - strand, within QEN71_RS24000 at 5344.217 kb on - strand, within QEN71_RS24000 at 5344.217 kb on - strand, within QEN71_RS24000 at 5344.304 kb on - strand, within QEN71_RS24000 at 5344.304 kb on - strand, within QEN71_RS24000 at 5344.339 kb on + strand, within QEN71_RS24000 at 5344.340 kb on - strand, within QEN71_RS24000 at 5344.384 kb on + strand, within QEN71_RS24000 at 5344.384 kb on + strand, within QEN71_RS24000 at 5344.385 kb on - strand, within QEN71_RS24000 at 5344.385 kb on - strand, within QEN71_RS24000 at 5344.456 kb on + strand, within QEN71_RS24000 at 5344.580 kb on + strand at 5344.580 kb on + strand at 5344.580 kb on + strand at 5344.580 kb on + strand at 5344.580 kb on + strand at 5344.580 kb on + strand at 5344.580 kb on + strand at 5344.580 kb on + strand at 5344.580 kb on + strand at 5344.580 kb on + strand at 5344.581 kb on - strand at 5344.581 kb on - strand at 5344.581 kb on - strand at 5344.581 kb on - strand at 5344.581 kb on - strand at 5344.581 kb on - strand at 5344.581 kb on - strand at 5344.581 kb on - strand at 5344.581 kb on - strand at 5344.609 kb on + strand at 5344.609 kb on + strand at 5344.641 kb on + strand at 5344.641 kb on + strand at 5344.641 kb on + strand at 5344.641 kb on + strand at 5344.642 kb on - strand at 5344.642 kb on - strand at 5344.646 kb on + strand at 5344.646 kb on + strand at 5344.646 kb on + strand at 5344.646 kb on + strand at 5344.646 kb on + strand at 5344.647 kb on - strand at 5344.647 kb on - strand at 5344.647 kb on - strand at 5344.647 kb on - strand at 5344.647 kb on - strand at 5344.647 kb on - strand at 5344.647 kb on - strand at 5344.647 kb on - strand at 5344.698 kb on + strand at 5344.698 kb on + strand at 5344.698 kb on + strand at 5344.699 kb on - strand at 5344.699 kb on - strand at 5344.823 kb on + strand, within QEN71_RS24005 at 5344.824 kb on - strand, within QEN71_RS24005 at 5345.071 kb on - strand, within QEN71_RS24005 at 5345.288 kb on - strand at 5345.329 kb on + strand at 5345.329 kb on + strand at 5345.329 kb on + strand at 5345.329 kb on + strand at 5345.329 kb on + strand at 5345.330 kb on - strand at 5345.330 kb on - strand at 5345.330 kb on - strand at 5345.330 kb on - strand at 5345.330 kb on - strand at 5345.330 kb on - strand at 5345.470 kb on + strand, within QEN71_RS24010 at 5345.517 kb on - strand, within QEN71_RS24010 at 5345.579 kb on + strand, within QEN71_RS24010 at 5345.599 kb on + strand, within QEN71_RS24010 at 5345.599 kb on + strand, within QEN71_RS24010 at 5345.599 kb on + strand, within QEN71_RS24010 at 5345.599 kb on + strand, within QEN71_RS24010 at 5345.600 kb on - strand, within QEN71_RS24010 at 5345.703 kb on - strand, within QEN71_RS24010 at 5345.703 kb on - strand, within QEN71_RS24010 at 5345.703 kb on - strand, within QEN71_RS24010 at 5345.711 kb on + strand, within QEN71_RS24010 at 5345.711 kb on + strand, within QEN71_RS24010 at 5345.711 kb on + strand, within QEN71_RS24010 at 5345.711 kb on + strand, within QEN71_RS24010 at 5345.711 kb on + strand, within QEN71_RS24010 at 5345.711 kb on + strand, within QEN71_RS24010 at 5345.712 kb on - strand, within QEN71_RS24010 at 5345.712 kb on - strand, within QEN71_RS24010 at 5345.712 kb on - strand, within QEN71_RS24010 at 5345.712 kb on - strand, within QEN71_RS24010 at 5345.712 kb on - strand, within QEN71_RS24010 at 5345.712 kb on - strand, within QEN71_RS24010 at 5345.712 kb on - strand, within QEN71_RS24010 at 5345.712 kb on - strand, within QEN71_RS24010 at 5345.775 kb on - strand, within QEN71_RS24010 at 5345.775 kb on - strand, within QEN71_RS24010 at 5345.775 kb on - strand, within QEN71_RS24010 at 5345.836 kb on + strand, within QEN71_RS24010 at 5345.836 kb on + strand, within QEN71_RS24010 at 5345.942 kb on + strand, within QEN71_RS24010 at 5345.942 kb on + strand, within QEN71_RS24010 at 5345.942 kb on + strand, within QEN71_RS24010 at 5345.942 kb on + strand, within QEN71_RS24010 at 5345.942 kb on + strand, within QEN71_RS24010 at 5345.942 kb on + strand, within QEN71_RS24010 at 5345.942 kb on + strand, within QEN71_RS24010 at 5345.942 kb on + strand, within QEN71_RS24010 at 5345.942 kb on + strand, within QEN71_RS24010 at 5345.943 kb on - strand, within QEN71_RS24010 at 5345.943 kb on - strand, within QEN71_RS24010 at 5345.943 kb on - strand, within QEN71_RS24010 at 5345.943 kb on - strand, within QEN71_RS24010 at 5345.943 kb on - strand, within QEN71_RS24010 at 5345.943 kb on - strand, within QEN71_RS24010 at 5345.943 kb on - strand, within QEN71_RS24010 at 5345.943 kb on - strand, within QEN71_RS24010 at 5345.957 kb on + strand, within QEN71_RS24010 at 5345.957 kb on + strand, within QEN71_RS24010 at 5345.958 kb on - strand, within QEN71_RS24010 at 5346.034 kb on + strand, within QEN71_RS24010 at 5346.041 kb on + strand, within QEN71_RS24010 at 5346.041 kb on + strand, within QEN71_RS24010 at 5346.041 kb on + strand, within QEN71_RS24010 at 5346.041 kb on + strand, within QEN71_RS24010 at 5346.041 kb on + strand, within QEN71_RS24010 at 5346.041 kb on + strand, within QEN71_RS24010 at 5346.041 kb on + strand, within QEN71_RS24010 at 5346.042 kb on - strand, within QEN71_RS24010 at 5346.042 kb on - strand, within QEN71_RS24010 at 5346.042 kb on - strand, within QEN71_RS24010 at 5346.042 kb on - strand, within QEN71_RS24010 at 5346.042 kb on - strand, within QEN71_RS24010 at 5346.042 kb on - strand, within QEN71_RS24010 at 5346.042 kb on - strand, within QEN71_RS24010 at 5346.068 kb on + strand, within QEN71_RS24010 at 5346.068 kb on + strand, within QEN71_RS24010 at 5346.068 kb on + strand, within QEN71_RS24010 at 5346.068 kb on + strand, within QEN71_RS24010 at 5346.069 kb on - strand, within QEN71_RS24010 at 5346.069 kb on - strand, within QEN71_RS24010 at 5346.167 kb on + strand, within QEN71_RS24010 at 5346.167 kb on + strand, within QEN71_RS24010 at 5346.167 kb on + strand, within QEN71_RS24010 at 5346.167 kb on + strand, within QEN71_RS24010 at 5346.167 kb on + strand, within QEN71_RS24010 at 5346.167 kb on - strand, within QEN71_RS24010 at 5346.168 kb on - strand, within QEN71_RS24010 at 5346.168 kb on - strand, within QEN71_RS24010 at 5346.168 kb on - strand, within QEN71_RS24010 at 5346.168 kb on - strand, within QEN71_RS24010 at 5346.168 kb on - strand, within QEN71_RS24010 at 5346.168 kb on - strand, within QEN71_RS24010 at 5346.168 kb on - strand, within QEN71_RS24010 at 5346.168 kb on - strand, within QEN71_RS24010 at 5346.168 kb on - strand, within QEN71_RS24010 at 5346.168 kb on - strand, within QEN71_RS24010 at 5346.188 kb on + strand, within QEN71_RS24010 at 5346.189 kb on - strand, within QEN71_RS24010 at 5346.209 kb on + strand, within QEN71_RS24010 at 5346.209 kb on + strand, within QEN71_RS24010 at 5346.210 kb on - strand, within QEN71_RS24010 at 5346.210 kb on - strand, within QEN71_RS24010 at 5346.210 kb on - strand, within QEN71_RS24010 at 5346.210 kb on - strand, within QEN71_RS24010 at 5346.210 kb on - strand, within QEN71_RS24010 at 5346.210 kb on - strand, within QEN71_RS24010
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-Ribose (C) remove 5,343,710 + QEN71_RS23995 0.89 +0.7 5,343,710 + QEN71_RS23995 0.89 +0.3 5,343,711 - QEN71_RS23995 0.89 +0.6 5,343,711 - QEN71_RS23995 0.89 +0.4 5,343,711 - QEN71_RS23995 0.89 -0.2 5,343,711 - QEN71_RS23995 0.89 -0.2 5,343,711 - QEN71_RS23995 0.89 -0.0 5,343,711 - QEN71_RS23995 0.89 -0.1 5,343,711 - QEN71_RS23995 0.89 -0.3 5,343,819 + -0.2 5,343,819 + -1.2 5,343,819 + -1.2 5,343,819 + -1.0 5,343,820 - -0.8 5,343,820 - -0.0 5,343,820 - +0.4 5,343,820 - -0.7 5,343,892 + -2.6 5,343,892 + -0.9 5,343,892 + -0.2 5,343,892 + -0.1 5,343,893 - -0.1 5,343,893 - -0.1 5,343,893 - +0.2 5,343,893 - -0.8 5,343,893 - -0.1 5,343,893 - -0.0 5,343,893 - -1.3 5,343,893 - +0.5 5,343,893 - -0.9 5,343,893 - -0.4 5,343,893 - +1.7 5,343,893 - +0.1 5,343,893 - +0.6 5,343,928 + -0.8 5,343,929 - -0.5 5,343,929 - -2.1 5,343,989 - QEN71_RS24000 0.16 +0.2 5,344,040 - QEN71_RS24000 0.22 +0.9 5,344,040 - QEN71_RS24000 0.22 -0.5 5,344,040 - QEN71_RS24000 0.22 -0.3 5,344,117 + QEN71_RS24000 0.32 -0.6 5,344,117 + QEN71_RS24000 0.32 +0.2 5,344,117 + QEN71_RS24000 0.32 +0.4 5,344,117 + QEN71_RS24000 0.32 -0.5 5,344,216 + QEN71_RS24000 0.45 -0.1 5,344,217 - QEN71_RS24000 0.45 -1.2 5,344,217 - QEN71_RS24000 0.45 -1.4 5,344,217 - QEN71_RS24000 0.45 +0.1 5,344,217 - QEN71_RS24000 0.45 -1.1 5,344,217 - QEN71_RS24000 0.45 -0.0 5,344,304 - QEN71_RS24000 0.56 -0.2 5,344,304 - QEN71_RS24000 0.56 -0.6 5,344,339 + QEN71_RS24000 0.61 +1.7 5,344,340 - QEN71_RS24000 0.61 -0.4 5,344,384 + QEN71_RS24000 0.66 -0.5 5,344,384 + QEN71_RS24000 0.66 +0.2 5,344,385 - QEN71_RS24000 0.67 -1.1 5,344,385 - QEN71_RS24000 0.67 +0.7 5,344,456 + QEN71_RS24000 0.76 +1.6 5,344,580 + -0.2 5,344,580 + +1.8 5,344,580 + -0.2 5,344,580 + -0.7 5,344,580 + +1.0 5,344,580 + -1.3 5,344,580 + -2.5 5,344,580 + -0.3 5,344,580 + +2.3 5,344,580 + +0.3 5,344,581 - +1.1 5,344,581 - -0.5 5,344,581 - -0.0 5,344,581 - +0.1 5,344,581 - -0.0 5,344,581 - -0.2 5,344,581 - -1.0 5,344,581 - +0.8 5,344,581 - +1.8 5,344,609 + +0.3 5,344,609 + -1.0 5,344,641 + +0.3 5,344,641 + +1.6 5,344,641 + +1.3 5,344,641 + +1.5 5,344,642 - -0.7 5,344,642 - -0.2 5,344,646 + -0.7 5,344,646 + +1.2 5,344,646 + -0.7 5,344,646 + -0.9 5,344,646 + -0.3 5,344,647 - -1.3 5,344,647 - -0.4 5,344,647 - +0.2 5,344,647 - -0.0 5,344,647 - -0.7 5,344,647 - -0.5 5,344,647 - +0.8 5,344,647 - -0.5 5,344,698 + -0.1 5,344,698 + -0.6 5,344,698 + -1.2 5,344,699 - -0.2 5,344,699 - -0.8 5,344,823 + QEN71_RS24005 0.23 -1.7 5,344,824 - QEN71_RS24005 0.23 -0.6 5,345,071 - QEN71_RS24005 0.71 -0.6 5,345,288 - -0.8 5,345,329 + -0.9 5,345,329 + +0.5 5,345,329 + -1.0 5,345,329 + +0.0 5,345,329 + -0.2 5,345,330 - +0.7 5,345,330 - +0.4 5,345,330 - -0.8 5,345,330 - -0.0 5,345,330 - +0.7 5,345,330 - +0.2 5,345,470 + QEN71_RS24010 0.15 -0.0 5,345,517 - QEN71_RS24010 0.18 +0.2 5,345,579 + QEN71_RS24010 0.24 +0.6 5,345,599 + QEN71_RS24010 0.25 -0.8 5,345,599 + QEN71_RS24010 0.25 -0.6 5,345,599 + QEN71_RS24010 0.25 +1.0 5,345,599 + QEN71_RS24010 0.25 -0.3 5,345,600 - QEN71_RS24010 0.25 +0.1 5,345,703 - QEN71_RS24010 0.34 +0.1 5,345,703 - QEN71_RS24010 0.34 +0.4 5,345,703 - QEN71_RS24010 0.34 +0.1 5,345,711 + QEN71_RS24010 0.35 -0.5 5,345,711 + QEN71_RS24010 0.35 +0.8 5,345,711 + QEN71_RS24010 0.35 -0.2 5,345,711 + QEN71_RS24010 0.35 -0.0 5,345,711 + QEN71_RS24010 0.35 +0.0 5,345,711 + QEN71_RS24010 0.35 -0.2 5,345,712 - QEN71_RS24010 0.35 +0.7 5,345,712 - QEN71_RS24010 0.35 +0.8 5,345,712 - QEN71_RS24010 0.35 +0.5 5,345,712 - QEN71_RS24010 0.35 -0.1 5,345,712 - QEN71_RS24010 0.35 +0.8 5,345,712 - QEN71_RS24010 0.35 +1.6 5,345,712 - QEN71_RS24010 0.35 -0.0 5,345,712 - QEN71_RS24010 0.35 -0.3 5,345,775 - QEN71_RS24010 0.40 -1.8 5,345,775 - QEN71_RS24010 0.40 +0.5 5,345,775 - QEN71_RS24010 0.40 +0.0 5,345,836 + QEN71_RS24010 0.45 -2.1 5,345,836 + QEN71_RS24010 0.45 -0.2 5,345,942 + QEN71_RS24010 0.54 -1.5 5,345,942 + QEN71_RS24010 0.54 +0.0 5,345,942 + QEN71_RS24010 0.54 +0.1 5,345,942 + QEN71_RS24010 0.54 +0.4 5,345,942 + QEN71_RS24010 0.54 -1.9 5,345,942 + QEN71_RS24010 0.54 +0.3 5,345,942 + QEN71_RS24010 0.54 +0.5 5,345,942 + QEN71_RS24010 0.54 +0.7 5,345,942 + QEN71_RS24010 0.54 -0.3 5,345,943 - QEN71_RS24010 0.54 +1.3 5,345,943 - QEN71_RS24010 0.54 +0.3 5,345,943 - QEN71_RS24010 0.54 -0.1 5,345,943 - QEN71_RS24010 0.54 -0.0 5,345,943 - QEN71_RS24010 0.54 +0.2 5,345,943 - QEN71_RS24010 0.54 +0.0 5,345,943 - QEN71_RS24010 0.54 +1.8 5,345,943 - QEN71_RS24010 0.54 +0.4 5,345,957 + QEN71_RS24010 0.55 -0.3 5,345,957 + QEN71_RS24010 0.55 -1.7 5,345,958 - QEN71_RS24010 0.55 +0.3 5,346,034 + QEN71_RS24010 0.62 +0.6 5,346,041 + QEN71_RS24010 0.62 -0.1 5,346,041 + QEN71_RS24010 0.62 -0.6 5,346,041 + QEN71_RS24010 0.62 -0.8 5,346,041 + QEN71_RS24010 0.62 -1.2 5,346,041 + QEN71_RS24010 0.62 -1.3 5,346,041 + QEN71_RS24010 0.62 -0.3 5,346,041 + QEN71_RS24010 0.62 +0.9 5,346,042 - QEN71_RS24010 0.63 +0.1 5,346,042 - QEN71_RS24010 0.63 -0.6 5,346,042 - QEN71_RS24010 0.63 -0.8 5,346,042 - QEN71_RS24010 0.63 -1.1 5,346,042 - QEN71_RS24010 0.63 -0.3 5,346,042 - QEN71_RS24010 0.63 -0.3 5,346,042 - QEN71_RS24010 0.63 +0.6 5,346,068 + QEN71_RS24010 0.65 +0.1 5,346,068 + QEN71_RS24010 0.65 +0.8 5,346,068 + QEN71_RS24010 0.65 +1.2 5,346,068 + QEN71_RS24010 0.65 +0.8 5,346,069 - QEN71_RS24010 0.65 -1.1 5,346,069 - QEN71_RS24010 0.65 -0.3 5,346,167 + QEN71_RS24010 0.73 +0.5 5,346,167 + QEN71_RS24010 0.73 +0.4 5,346,167 + QEN71_RS24010 0.73 -1.2 5,346,167 + QEN71_RS24010 0.73 +0.7 5,346,167 + QEN71_RS24010 0.73 +0.5 5,346,167 - QEN71_RS24010 0.73 -0.3 5,346,168 - QEN71_RS24010 0.73 -0.5 5,346,168 - QEN71_RS24010 0.73 -0.3 5,346,168 - QEN71_RS24010 0.73 -1.6 5,346,168 - QEN71_RS24010 0.73 -1.5 5,346,168 - QEN71_RS24010 0.73 -1.1 5,346,168 - QEN71_RS24010 0.73 -0.8 5,346,168 - QEN71_RS24010 0.73 -0.0 5,346,168 - QEN71_RS24010 0.73 +0.0 5,346,168 - QEN71_RS24010 0.73 +0.2 5,346,168 - QEN71_RS24010 0.73 -0.4 5,346,188 + QEN71_RS24010 0.75 +1.0 5,346,189 - QEN71_RS24010 0.75 +0.9 5,346,209 + QEN71_RS24010 0.77 +1.5 5,346,209 + QEN71_RS24010 0.77 -1.5 5,346,210 - QEN71_RS24010 0.77 -0.2 5,346,210 - QEN71_RS24010 0.77 -0.2 5,346,210 - QEN71_RS24010 0.77 +1.0 5,346,210 - QEN71_RS24010 0.77 +0.1 5,346,210 - QEN71_RS24010 0.77 -0.4 5,346,210 - QEN71_RS24010 0.77 -2.7
Or see this region's nucleotide sequence