Experiment: 2-Deoxy-D-Ribose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS21275 and QEN71_RS21280 overlap by 1 nucleotides QEN71_RS21280 and QEN71_RS21285 are separated by 79 nucleotides QEN71_RS21285 and QEN71_RS21290 are separated by 43 nucleotides
QEN71_RS21275: QEN71_RS21275 - 2-aminoethylphosphonate ABC transporter permease subunit, at 4,714,265 to 4,715,188
_RS21275
QEN71_RS21280: QEN71_RS21280 - 2-aminoethylphosphonate ABC transport system, membrane component PhnV, at 4,715,188 to 4,716,048
_RS21280
QEN71_RS21285: QEN71_RS21285 - phosphonate utilization associated transcriptional regulator, at 4,716,128 to 4,716,889
_RS21285
QEN71_RS21290: QEN71_RS21290 - phosphonoacetate hydrolase, at 4,716,933 to 4,718,204
_RS21290
Position (kb) 4716
4717 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 4715.138 kb on + strand at 4715.138 kb on + strand at 4715.138 kb on + strand at 4715.138 kb on + strand at 4715.138 kb on + strand at 4715.138 kb on + strand at 4715.139 kb on - strand at 4715.139 kb on - strand at 4715.139 kb on - strand at 4715.148 kb on - strand at 4715.148 kb on - strand at 4715.186 kb on + strand at 4715.186 kb on + strand at 4715.186 kb on + strand at 4715.186 kb on + strand at 4715.186 kb on + strand at 4715.187 kb on - strand at 4715.187 kb on - strand at 4715.187 kb on - strand at 4715.556 kb on + strand, within QEN71_RS21280 at 4715.620 kb on + strand, within QEN71_RS21280 at 4715.620 kb on + strand, within QEN71_RS21280 at 4715.620 kb on + strand, within QEN71_RS21280 at 4715.621 kb on - strand, within QEN71_RS21280 at 4715.621 kb on - strand, within QEN71_RS21280 at 4715.701 kb on + strand, within QEN71_RS21280 at 4715.947 kb on + strand, within QEN71_RS21280 at 4715.948 kb on - strand, within QEN71_RS21280 at 4715.950 kb on + strand, within QEN71_RS21280 at 4715.950 kb on + strand, within QEN71_RS21280 at 4715.950 kb on + strand, within QEN71_RS21280 at 4715.951 kb on - strand, within QEN71_RS21280 at 4715.951 kb on - strand, within QEN71_RS21280 at 4716.410 kb on + strand, within QEN71_RS21285 at 4716.410 kb on + strand, within QEN71_RS21285 at 4716.411 kb on - strand, within QEN71_RS21285 at 4716.411 kb on - strand, within QEN71_RS21285 at 4716.411 kb on - strand, within QEN71_RS21285 at 4716.411 kb on - strand, within QEN71_RS21285 at 4716.411 kb on - strand, within QEN71_RS21285 at 4716.486 kb on + strand, within QEN71_RS21285 at 4716.486 kb on + strand, within QEN71_RS21285 at 4716.487 kb on - strand, within QEN71_RS21285 at 4716.487 kb on - strand, within QEN71_RS21285 at 4716.487 kb on - strand, within QEN71_RS21285 at 4716.545 kb on + strand, within QEN71_RS21285 at 4716.545 kb on + strand, within QEN71_RS21285 at 4716.545 kb on + strand, within QEN71_RS21285 at 4716.545 kb on + strand, within QEN71_RS21285 at 4716.545 kb on + strand, within QEN71_RS21285 at 4716.546 kb on - strand, within QEN71_RS21285 at 4716.546 kb on - strand, within QEN71_RS21285 at 4716.546 kb on - strand, within QEN71_RS21285 at 4716.608 kb on + strand, within QEN71_RS21285 at 4716.608 kb on + strand, within QEN71_RS21285 at 4716.608 kb on + strand, within QEN71_RS21285 at 4716.608 kb on + strand, within QEN71_RS21285 at 4716.608 kb on + strand, within QEN71_RS21285 at 4716.609 kb on - strand, within QEN71_RS21285 at 4716.609 kb on - strand, within QEN71_RS21285 at 4716.609 kb on - strand, within QEN71_RS21285 at 4716.609 kb on - strand, within QEN71_RS21285 at 4716.609 kb on - strand, within QEN71_RS21285 at 4716.609 kb on - strand, within QEN71_RS21285 at 4716.609 kb on - strand, within QEN71_RS21285 at 4716.609 kb on - strand, within QEN71_RS21285 at 4716.609 kb on - strand, within QEN71_RS21285 at 4716.609 kb on - strand, within QEN71_RS21285 at 4716.617 kb on + strand, within QEN71_RS21285 at 4716.618 kb on - strand, within QEN71_RS21285 at 4716.618 kb on - strand, within QEN71_RS21285 at 4716.819 kb on + strand at 4716.819 kb on + strand at 4716.819 kb on + strand at 4716.819 kb on + strand at 4716.820 kb on - strand at 4716.919 kb on + strand at 4716.965 kb on + strand at 4716.965 kb on + strand at 4716.965 kb on + strand at 4716.965 kb on + strand at 4716.965 kb on + strand at 4716.965 kb on + strand at 4716.965 kb on + strand at 4716.965 kb on + strand at 4716.965 kb on + strand at 4716.966 kb on - strand at 4716.966 kb on - strand at 4716.966 kb on - strand at 4716.966 kb on - strand at 4716.966 kb on - strand at 4716.966 kb on - strand at 4716.966 kb on - strand at 4716.966 kb on - strand at 4716.966 kb on - strand at 4716.966 kb on - strand at 4716.966 kb on - strand at 4716.990 kb on + strand at 4717.041 kb on + strand at 4717.041 kb on + strand at 4717.042 kb on - strand at 4717.047 kb on + strand at 4717.047 kb on + strand at 4717.047 kb on + strand at 4717.212 kb on + strand, within QEN71_RS21290 at 4717.212 kb on + strand, within QEN71_RS21290 at 4717.212 kb on + strand, within QEN71_RS21290 at 4717.212 kb on + strand, within QEN71_RS21290 at 4717.212 kb on + strand, within QEN71_RS21290 at 4717.213 kb on - strand, within QEN71_RS21290 at 4717.213 kb on - strand, within QEN71_RS21290 at 4717.276 kb on - strand, within QEN71_RS21290 at 4717.482 kb on + strand, within QEN71_RS21290 at 4717.482 kb on + strand, within QEN71_RS21290 at 4717.483 kb on - strand, within QEN71_RS21290 at 4717.483 kb on - strand, within QEN71_RS21290 at 4717.557 kb on + strand, within QEN71_RS21290 at 4717.557 kb on + strand, within QEN71_RS21290 at 4717.557 kb on + strand, within QEN71_RS21290 at 4717.557 kb on + strand, within QEN71_RS21290 at 4717.557 kb on + strand, within QEN71_RS21290 at 4717.557 kb on + strand, within QEN71_RS21290 at 4717.557 kb on + strand, within QEN71_RS21290 at 4717.557 kb on + strand, within QEN71_RS21290 at 4717.557 kb on + strand, within QEN71_RS21290 at 4717.558 kb on - strand, within QEN71_RS21290 at 4717.558 kb on - strand, within QEN71_RS21290 at 4717.558 kb on - strand, within QEN71_RS21290 at 4717.558 kb on - strand, within QEN71_RS21290 at 4717.558 kb on - strand, within QEN71_RS21290 at 4717.558 kb on - strand, within QEN71_RS21290 at 4717.558 kb on - strand, within QEN71_RS21290 at 4717.558 kb on - strand, within QEN71_RS21290 at 4717.575 kb on + strand, within QEN71_RS21290 at 4717.575 kb on + strand, within QEN71_RS21290 at 4717.575 kb on + strand, within QEN71_RS21290 at 4717.575 kb on + strand, within QEN71_RS21290 at 4717.576 kb on - strand, within QEN71_RS21290 at 4717.576 kb on - strand, within QEN71_RS21290 at 4717.576 kb on - strand, within QEN71_RS21290 at 4717.623 kb on + strand, within QEN71_RS21290 at 4717.623 kb on + strand, within QEN71_RS21290 at 4717.624 kb on - strand, within QEN71_RS21290 at 4717.624 kb on - strand, within QEN71_RS21290 at 4717.624 kb on - strand, within QEN71_RS21290 at 4717.624 kb on - strand, within QEN71_RS21290 at 4717.624 kb on - strand, within QEN71_RS21290 at 4717.641 kb on + strand, within QEN71_RS21290 at 4717.642 kb on - strand, within QEN71_RS21290 at 4717.642 kb on - strand, within QEN71_RS21290 at 4717.642 kb on - strand, within QEN71_RS21290 at 4717.642 kb on - strand, within QEN71_RS21290 at 4717.743 kb on + strand, within QEN71_RS21290 at 4717.743 kb on + strand, within QEN71_RS21290 at 4717.743 kb on + strand, within QEN71_RS21290 at 4717.744 kb on - strand, within QEN71_RS21290 at 4717.744 kb on - strand, within QEN71_RS21290 at 4717.744 kb on - strand, within QEN71_RS21290 at 4717.744 kb on - strand, within QEN71_RS21290 at 4717.744 kb on - strand, within QEN71_RS21290 at 4717.815 kb on + strand, within QEN71_RS21290 at 4717.815 kb on + strand, within QEN71_RS21290 at 4717.815 kb on + strand, within QEN71_RS21290 at 4717.816 kb on - strand, within QEN71_RS21290 at 4717.816 kb on - strand, within QEN71_RS21290 at 4717.816 kb on - strand, within QEN71_RS21290 at 4717.816 kb on - strand, within QEN71_RS21290 at 4717.816 kb on - strand, within QEN71_RS21290 at 4717.857 kb on + strand, within QEN71_RS21290 at 4717.857 kb on + strand, within QEN71_RS21290 at 4717.857 kb on + strand, within QEN71_RS21290 at 4717.857 kb on + strand, within QEN71_RS21290 at 4717.857 kb on + strand, within QEN71_RS21290 at 4717.857 kb on + strand, within QEN71_RS21290 at 4717.858 kb on - strand, within QEN71_RS21290 at 4717.858 kb on - strand, within QEN71_RS21290 at 4717.858 kb on - strand, within QEN71_RS21290 at 4717.858 kb on - strand, within QEN71_RS21290
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-Ribose (C) remove 4,715,138 + -0.1 4,715,138 + -0.0 4,715,138 + +0.8 4,715,138 + +0.6 4,715,138 + +0.8 4,715,138 + -0.6 4,715,139 - -0.8 4,715,139 - -1.8 4,715,139 - -0.3 4,715,148 - +0.6 4,715,148 - -0.8 4,715,186 + +0.0 4,715,186 + -1.0 4,715,186 + -0.2 4,715,186 + -0.2 4,715,186 + -0.3 4,715,187 - -0.0 4,715,187 - -0.2 4,715,187 - -0.2 4,715,556 + QEN71_RS21280 0.43 -1.6 4,715,620 + QEN71_RS21280 0.50 -0.1 4,715,620 + QEN71_RS21280 0.50 +0.5 4,715,620 + QEN71_RS21280 0.50 -0.3 4,715,621 - QEN71_RS21280 0.50 -0.0 4,715,621 - QEN71_RS21280 0.50 +1.4 4,715,701 + QEN71_RS21280 0.60 -0.4 4,715,947 + QEN71_RS21280 0.88 +0.5 4,715,948 - QEN71_RS21280 0.88 +0.3 4,715,950 + QEN71_RS21280 0.89 -0.7 4,715,950 + QEN71_RS21280 0.89 +0.5 4,715,950 + QEN71_RS21280 0.89 +0.2 4,715,951 - QEN71_RS21280 0.89 -0.1 4,715,951 - QEN71_RS21280 0.89 -0.5 4,716,410 + QEN71_RS21285 0.37 +0.1 4,716,410 + QEN71_RS21285 0.37 -0.4 4,716,411 - QEN71_RS21285 0.37 -0.6 4,716,411 - QEN71_RS21285 0.37 -0.5 4,716,411 - QEN71_RS21285 0.37 +0.5 4,716,411 - QEN71_RS21285 0.37 +0.3 4,716,411 - QEN71_RS21285 0.37 -0.6 4,716,486 + QEN71_RS21285 0.47 -0.1 4,716,486 + QEN71_RS21285 0.47 +0.1 4,716,487 - QEN71_RS21285 0.47 +0.5 4,716,487 - QEN71_RS21285 0.47 +0.9 4,716,487 - QEN71_RS21285 0.47 -0.4 4,716,545 + QEN71_RS21285 0.55 +0.5 4,716,545 + QEN71_RS21285 0.55 -0.8 4,716,545 + QEN71_RS21285 0.55 -1.7 4,716,545 + QEN71_RS21285 0.55 -2.4 4,716,545 + QEN71_RS21285 0.55 +0.4 4,716,546 - QEN71_RS21285 0.55 +0.2 4,716,546 - QEN71_RS21285 0.55 -0.1 4,716,546 - QEN71_RS21285 0.55 -1.5 4,716,608 + QEN71_RS21285 0.63 -0.2 4,716,608 + QEN71_RS21285 0.63 -0.2 4,716,608 + QEN71_RS21285 0.63 -0.6 4,716,608 + QEN71_RS21285 0.63 +0.3 4,716,608 + QEN71_RS21285 0.63 +0.7 4,716,609 - QEN71_RS21285 0.63 -2.2 4,716,609 - QEN71_RS21285 0.63 -0.8 4,716,609 - QEN71_RS21285 0.63 -0.5 4,716,609 - QEN71_RS21285 0.63 +0.6 4,716,609 - QEN71_RS21285 0.63 -0.7 4,716,609 - QEN71_RS21285 0.63 -0.8 4,716,609 - QEN71_RS21285 0.63 -0.5 4,716,609 - QEN71_RS21285 0.63 -0.7 4,716,609 - QEN71_RS21285 0.63 -0.2 4,716,609 - QEN71_RS21285 0.63 -0.1 4,716,617 + QEN71_RS21285 0.64 +0.2 4,716,618 - QEN71_RS21285 0.64 +0.1 4,716,618 - QEN71_RS21285 0.64 -1.5 4,716,819 + +0.0 4,716,819 + -1.1 4,716,819 + -0.4 4,716,819 + -0.9 4,716,820 - +0.1 4,716,919 + +0.1 4,716,965 + -0.7 4,716,965 + -0.4 4,716,965 + -1.1 4,716,965 + +0.4 4,716,965 + +0.7 4,716,965 + -1.1 4,716,965 + -0.4 4,716,965 + +0.6 4,716,965 + +0.0 4,716,966 - +0.2 4,716,966 - +2.1 4,716,966 - +0.6 4,716,966 - +0.1 4,716,966 - -1.6 4,716,966 - -0.1 4,716,966 - -0.4 4,716,966 - +0.4 4,716,966 - +1.2 4,716,966 - -0.2 4,716,966 - +0.6 4,716,990 + -0.9 4,717,041 + -0.4 4,717,041 + -0.5 4,717,042 - -0.5 4,717,047 + -0.1 4,717,047 + -0.4 4,717,047 + -0.8 4,717,212 + QEN71_RS21290 0.22 -0.5 4,717,212 + QEN71_RS21290 0.22 +0.5 4,717,212 + QEN71_RS21290 0.22 +0.9 4,717,212 + QEN71_RS21290 0.22 -0.3 4,717,212 + QEN71_RS21290 0.22 +0.6 4,717,213 - QEN71_RS21290 0.22 +1.9 4,717,213 - QEN71_RS21290 0.22 +0.3 4,717,276 - QEN71_RS21290 0.27 -0.4 4,717,482 + QEN71_RS21290 0.43 +0.2 4,717,482 + QEN71_RS21290 0.43 -0.6 4,717,483 - QEN71_RS21290 0.43 -0.1 4,717,483 - QEN71_RS21290 0.43 -0.1 4,717,557 + QEN71_RS21290 0.49 -1.6 4,717,557 + QEN71_RS21290 0.49 +0.6 4,717,557 + QEN71_RS21290 0.49 -0.1 4,717,557 + QEN71_RS21290 0.49 +0.3 4,717,557 + QEN71_RS21290 0.49 -0.3 4,717,557 + QEN71_RS21290 0.49 -1.3 4,717,557 + QEN71_RS21290 0.49 -0.7 4,717,557 + QEN71_RS21290 0.49 -0.2 4,717,557 + QEN71_RS21290 0.49 -0.1 4,717,558 - QEN71_RS21290 0.49 -1.0 4,717,558 - QEN71_RS21290 0.49 +0.3 4,717,558 - QEN71_RS21290 0.49 +1.7 4,717,558 - QEN71_RS21290 0.49 -0.9 4,717,558 - QEN71_RS21290 0.49 +0.2 4,717,558 - QEN71_RS21290 0.49 -0.7 4,717,558 - QEN71_RS21290 0.49 -0.3 4,717,558 - QEN71_RS21290 0.49 -0.7 4,717,575 + QEN71_RS21290 0.50 -0.6 4,717,575 + QEN71_RS21290 0.50 -0.4 4,717,575 + QEN71_RS21290 0.50 +0.5 4,717,575 + QEN71_RS21290 0.50 -0.5 4,717,576 - QEN71_RS21290 0.51 -0.9 4,717,576 - QEN71_RS21290 0.51 +0.5 4,717,576 - QEN71_RS21290 0.51 -0.2 4,717,623 + QEN71_RS21290 0.54 -1.1 4,717,623 + QEN71_RS21290 0.54 -0.7 4,717,624 - QEN71_RS21290 0.54 -0.0 4,717,624 - QEN71_RS21290 0.54 -0.0 4,717,624 - QEN71_RS21290 0.54 -0.1 4,717,624 - QEN71_RS21290 0.54 -0.1 4,717,624 - QEN71_RS21290 0.54 +1.4 4,717,641 + QEN71_RS21290 0.56 +0.9 4,717,642 - QEN71_RS21290 0.56 -1.2 4,717,642 - QEN71_RS21290 0.56 +0.8 4,717,642 - QEN71_RS21290 0.56 +1.9 4,717,642 - QEN71_RS21290 0.56 -0.6 4,717,743 + QEN71_RS21290 0.64 +0.6 4,717,743 + QEN71_RS21290 0.64 -0.1 4,717,743 + QEN71_RS21290 0.64 -0.0 4,717,744 - QEN71_RS21290 0.64 -0.0 4,717,744 - QEN71_RS21290 0.64 -0.9 4,717,744 - QEN71_RS21290 0.64 -0.1 4,717,744 - QEN71_RS21290 0.64 -1.1 4,717,744 - QEN71_RS21290 0.64 +0.0 4,717,815 + QEN71_RS21290 0.69 -1.0 4,717,815 + QEN71_RS21290 0.69 +0.3 4,717,815 + QEN71_RS21290 0.69 +0.8 4,717,816 - QEN71_RS21290 0.69 +1.0 4,717,816 - QEN71_RS21290 0.69 -1.1 4,717,816 - QEN71_RS21290 0.69 -0.8 4,717,816 - QEN71_RS21290 0.69 +0.0 4,717,816 - QEN71_RS21290 0.69 -0.9 4,717,857 + QEN71_RS21290 0.73 +3.0 4,717,857 + QEN71_RS21290 0.73 +0.1 4,717,857 + QEN71_RS21290 0.73 -0.4 4,717,857 + QEN71_RS21290 0.73 +0.2 4,717,857 + QEN71_RS21290 0.73 -0.4 4,717,857 + QEN71_RS21290 0.73 -0.5 4,717,858 - QEN71_RS21290 0.73 -2.2 4,717,858 - QEN71_RS21290 0.73 -0.1 4,717,858 - QEN71_RS21290 0.73 -0.5 4,717,858 - QEN71_RS21290 0.73 +0.0
Or see this region's nucleotide sequence