Strain Fitness in Paraburkholderia sabiae LMG 24235 around QEN71_RS20190

Experiment: 2-Deoxy-D-Ribose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	2-Deoxy-D-Ribose (C)
4,490,045	+		QEN71_RS20185	0.23	-0.1
4,490,045	+		QEN71_RS20185	0.23	-0.1
4,490,045	+		QEN71_RS20185	0.23	-1.7
4,490,045	+		QEN71_RS20185	0.23	-1.3
4,490,045	+		QEN71_RS20185	0.23	-0.6
4,490,046	-		QEN71_RS20185	0.23	+0.3
4,490,046	-		QEN71_RS20185	0.23	-0.2
4,490,080	+		QEN71_RS20185	0.26	+0.1
4,490,081	-		QEN71_RS20185	0.27	-0.0
4,490,092	+		QEN71_RS20185	0.28	-0.9
4,490,092	+		QEN71_RS20185	0.28	-1.7
4,490,092	+		QEN71_RS20185	0.28	-0.9
4,490,122	+		QEN71_RS20185	0.31	-2.2
4,490,123	-		QEN71_RS20185	0.31	-0.2
4,490,123	-		QEN71_RS20185	0.31	-0.8
4,490,123	-		QEN71_RS20185	0.31	-0.4
4,490,123	-		QEN71_RS20185	0.31	+0.9
4,490,123	-		QEN71_RS20185	0.31	-0.3
4,490,123	-		QEN71_RS20185	0.31	+0.6
4,490,152	+		QEN71_RS20185	0.34	-1.4
4,490,152	+		QEN71_RS20185	0.34	-0.4
4,490,153	-		QEN71_RS20185	0.34	-0.9
4,490,321	+		QEN71_RS20185	0.53	-0.8
4,490,321	+		QEN71_RS20185	0.53	-0.1
4,490,527	+		QEN71_RS20185	0.75	+0.3
4,490,527	+		QEN71_RS20185	0.75	-1.7
4,490,527	+		QEN71_RS20185	0.75	-1.0
4,490,528	-		QEN71_RS20185	0.76	-0.3
4,490,528	-		QEN71_RS20185	0.76	-0.7
4,490,528	-		QEN71_RS20185	0.76	-0.8
4,490,528	-		QEN71_RS20185	0.76	+0.9
4,490,552	+		QEN71_RS20185	0.78	+0.3
4,490,552	+		QEN71_RS20185	0.78	-0.9
4,490,553	-		QEN71_RS20185	0.78	-0.2
4,490,553	-		QEN71_RS20185	0.78	-0.4
4,490,575	+		QEN71_RS20185	0.81	+0.1
4,490,575	+		QEN71_RS20185	0.81	-0.8
4,490,575	+		QEN71_RS20185	0.81	-0.6
4,490,575	+		QEN71_RS20185	0.81	-1.4
4,490,576	-		QEN71_RS20185	0.81	+1.1
4,490,587	+		QEN71_RS20185	0.82	-0.3
4,490,587	+		QEN71_RS20185	0.82	+0.1
4,490,588	-		QEN71_RS20185	0.82	-0.3
4,490,588	-		QEN71_RS20185	0.82	+0.2
4,490,588	-		QEN71_RS20185	0.82	-0.1
4,490,588	-		QEN71_RS20185	0.82	-0.5
4,490,611	+		QEN71_RS20185	0.85	+0.5
4,490,612	-		QEN71_RS20185	0.85	-0.5
4,490,637	-		QEN71_RS20185	0.88	-0.5
4,490,637	-		QEN71_RS20185	0.88	-0.6
4,490,692	+				-2.1
4,490,692	+				-0.6
4,490,692	+				+0.2
4,490,692	+				-1.8
4,490,693	-				-0.4
4,490,693	-				-0.6
4,490,716	+				+0.4
4,490,750	+				-1.2
4,490,750	+				-0.5
4,490,750	+				-0.2
4,490,750	+				-2.0
4,490,750	+				-1.5
4,490,750	+				-0.4
4,490,750	+				-0.5
4,490,750	+				-2.1
4,490,751	-				-1.0
4,490,751	-				+0.1
4,490,751	-				-0.2
4,490,751	-				-0.7
4,490,751	-				-0.5
4,490,751	-				+0.4
4,490,815	+				-0.7
4,490,854	+				-2.4
4,490,854	+				-1.6
4,490,855	-				-0.8
4,490,855	-				-3.2
4,490,855	-				-3.3
4,490,892	+				-2.8
4,490,892	+				-2.3
4,490,893	-				-0.4
4,490,907	+				+0.1
4,490,907	+				-2.6
4,490,907	+				-1.7
4,490,907	+				-2.6
4,490,908	-				+0.9
4,490,908	-				-2.2
4,490,908	-				-1.4
4,490,908	-				-1.9
4,490,950	+				-1.9
4,490,951	-				-0.7
4,490,951	-				-0.1
4,490,963	+				-3.0
4,490,963	+				-0.1
4,490,964	-				-2.7
4,490,971	+				-3.6
4,490,971	+				-1.4
4,490,972	-				-1.2
4,490,972	-				-2.0
4,490,972	-				-0.1
4,490,983	+				-2.3
4,490,983	+				-3.2
4,490,983	+				-0.7
4,490,983	+				-1.0
4,490,983	+				-4.0
4,490,983	+				-3.2
4,490,984	-				-1.5
4,490,984	-				-0.3
4,490,984	-				-1.7
4,490,984	-				-2.5
4,490,984	-				-2.4
4,490,984	-				-2.9
4,490,984	-				-1.5
4,490,998	+				-0.4
4,490,998	+				-1.0
4,491,059	+				-2.5
4,491,059	+				-1.3
4,491,059	+				-3.0
4,491,060	-				-3.4
4,491,060	-				-0.2
4,491,060	-				-3.6
4,491,112	+				-2.5
4,491,340	+		QEN71_RS20190	0.29	-4.0
4,491,408	+		QEN71_RS20190	0.36	-1.1
4,491,409	-		QEN71_RS20190	0.36	-0.8
4,491,409	-		QEN71_RS20190	0.36	-2.5
4,491,409	-		QEN71_RS20190	0.36	-3.0
4,491,409	-		QEN71_RS20190	0.36	-3.3
4,491,409	-		QEN71_RS20190	0.36	-2.4
4,491,409	-		QEN71_RS20190	0.36	-3.7
4,491,417	+		QEN71_RS20190	0.37	-1.2
4,491,418	-		QEN71_RS20190	0.37	-3.0
4,491,418	-		QEN71_RS20190	0.37	-3.9
4,491,418	-		QEN71_RS20190	0.37	-2.3
4,491,418	-		QEN71_RS20190	0.37	-1.7
4,491,455	+		QEN71_RS20190	0.41	-2.1
4,491,472	+		QEN71_RS20190	0.42	-1.5
4,491,582	+		QEN71_RS20190	0.53	-3.2
4,491,582	+		QEN71_RS20190	0.53	+0.3
4,491,582	+		QEN71_RS20190	0.53	-1.8
4,491,582	+		QEN71_RS20190	0.53	-4.2
4,491,582	+		QEN71_RS20190	0.53	-2.9
4,491,582	+		QEN71_RS20190	0.53	-2.0
4,491,582	+		QEN71_RS20190	0.53	-2.0
4,491,582	+		QEN71_RS20190	0.53	-2.0
4,491,583	-		QEN71_RS20190	0.53	-2.2
4,491,583	-		QEN71_RS20190	0.53	-4.2
4,491,583	-		QEN71_RS20190	0.53	-4.3
4,491,590	+		QEN71_RS20190	0.54	-2.4
4,491,590	+		QEN71_RS20190	0.54	-5.1
4,491,591	-		QEN71_RS20190	0.54	-1.8
4,491,591	-		QEN71_RS20190	0.54	-2.4
4,491,591	-		QEN71_RS20190	0.54	-0.7
4,491,612	+		QEN71_RS20190	0.56	-3.1
4,491,613	-		QEN71_RS20190	0.56	-2.2
4,491,613	-		QEN71_RS20190	0.56	+0.3
4,491,825	+		QEN71_RS20190	0.77	-0.7
4,491,900	+		QEN71_RS20190	0.85	-2.1
4,491,900	+		QEN71_RS20190	0.85	-2.6
4,491,901	-		QEN71_RS20190	0.85	-1.8
4,491,901	-		QEN71_RS20190	0.85	-0.9
4,492,023	+				-2.2
4,492,024	-				-1.8
4,492,076	+				-2.0
4,492,085	-				-2.4
4,492,085	-				-4.8
4,492,102	+				-1.1
4,492,102	+				-1.9
4,492,102	+				-0.4
4,492,102	+				-2.7
4,492,103	-				-3.8
4,492,103	-				-0.9
4,492,103	-				-3.0
4,492,363	+		QEN71_RS20195	0.12	-3.0
4,492,363	+		QEN71_RS20195	0.12	-2.8
4,492,364	-		QEN71_RS20195	0.12	-2.5
4,492,364	-		QEN71_RS20195	0.12	-2.8
4,492,364	-		QEN71_RS20195	0.12	-2.0
4,492,364	-		QEN71_RS20195	0.12	-1.4
4,492,364	-		QEN71_RS20195	0.12	-1.1
4,492,460	-		QEN71_RS20195	0.16	-2.7
4,492,654	+		QEN71_RS20195	0.24	-3.3
4,492,655	-		QEN71_RS20195	0.24	-2.4
4,493,017	-		QEN71_RS20195	0.40	-2.6
4,493,017	-		QEN71_RS20195	0.40	-3.2