Experiment: 2-Deoxy-D-Ribose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS20145 and QEN71_RS20150 are separated by 103 nucleotides QEN71_RS20150 and QEN71_RS20155 are separated by 197 nucleotides QEN71_RS20155 and QEN71_RS20160 are separated by 38 nucleotides QEN71_RS20160 and QEN71_RS20165 are separated by 89 nucleotides
QEN71_RS20145: QEN71_RS20145 - helix-turn-helix transcriptional regulator, at 4,484,451 to 4,485,356
_RS20145
QEN71_RS20150: QEN71_RS20150 - hypothetical protein, at 4,485,460 to 4,485,714
_RS20150
QEN71_RS20155: QEN71_RS20155 - nuclear transport factor 2 family protein, at 4,485,912 to 4,486,280
_RS20155
QEN71_RS20160: QEN71_RS20160 - hypothetical protein, at 4,486,319 to 4,486,559
_RS20160
QEN71_RS20165: QEN71_RS20165 - hypothetical protein, at 4,486,649 to 4,486,987
_RS20165
Position (kb) 4485
4486 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 4484.725 kb on + strand, within QEN71_RS20145 at 4484.726 kb on - strand, within QEN71_RS20145 at 4484.726 kb on - strand, within QEN71_RS20145 at 4485.046 kb on + strand, within QEN71_RS20145 at 4485.252 kb on - strand, within QEN71_RS20145 at 4485.357 kb on + strand at 4485.357 kb on + strand at 4485.357 kb on + strand at 4485.357 kb on + strand at 4485.358 kb on - strand at 4485.358 kb on - strand at 4485.368 kb on + strand at 4485.368 kb on + strand at 4485.368 kb on + strand at 4485.368 kb on + strand at 4485.368 kb on + strand at 4485.368 kb on + strand at 4485.368 kb on + strand at 4485.369 kb on - strand at 4485.369 kb on - strand at 4485.369 kb on - strand at 4485.425 kb on + strand at 4485.425 kb on + strand at 4485.425 kb on + strand at 4485.425 kb on + strand at 4485.426 kb on - strand at 4485.426 kb on - strand at 4485.426 kb on - strand at 4485.426 kb on - strand at 4485.426 kb on - strand at 4485.518 kb on - strand, within QEN71_RS20150 at 4485.550 kb on + strand, within QEN71_RS20150 at 4485.550 kb on + strand, within QEN71_RS20150 at 4485.550 kb on + strand, within QEN71_RS20150 at 4485.550 kb on + strand, within QEN71_RS20150 at 4485.550 kb on + strand, within QEN71_RS20150 at 4485.550 kb on + strand, within QEN71_RS20150 at 4485.550 kb on + strand, within QEN71_RS20150 at 4485.550 kb on + strand, within QEN71_RS20150 at 4485.550 kb on + strand, within QEN71_RS20150 at 4485.551 kb on - strand, within QEN71_RS20150 at 4485.551 kb on - strand, within QEN71_RS20150 at 4485.551 kb on - strand, within QEN71_RS20150 at 4485.551 kb on - strand, within QEN71_RS20150 at 4485.559 kb on + strand, within QEN71_RS20150 at 4485.559 kb on + strand, within QEN71_RS20150 at 4485.559 kb on + strand, within QEN71_RS20150 at 4485.559 kb on + strand, within QEN71_RS20150 at 4485.559 kb on + strand, within QEN71_RS20150 at 4485.560 kb on - strand, within QEN71_RS20150 at 4485.560 kb on - strand, within QEN71_RS20150 at 4485.560 kb on - strand, within QEN71_RS20150 at 4485.560 kb on - strand, within QEN71_RS20150 at 4485.560 kb on - strand, within QEN71_RS20150 at 4485.734 kb on - strand at 4485.796 kb on + strand at 4485.796 kb on + strand at 4485.796 kb on + strand at 4485.797 kb on - strand at 4485.808 kb on - strand at 4485.820 kb on + strand at 4485.820 kb on + strand at 4485.820 kb on + strand at 4485.820 kb on + strand at 4485.820 kb on + strand at 4485.820 kb on + strand at 4485.820 kb on + strand at 4485.820 kb on + strand at 4485.820 kb on + strand at 4485.821 kb on - strand at 4485.821 kb on - strand at 4485.821 kb on - strand at 4485.821 kb on - strand at 4485.821 kb on - strand at 4485.821 kb on - strand at 4485.821 kb on - strand at 4485.821 kb on - strand at 4485.821 kb on - strand at 4485.821 kb on - strand at 4485.821 kb on - strand at 4485.821 kb on - strand at 4485.924 kb on - strand at 4485.942 kb on + strand at 4485.942 kb on + strand at 4485.942 kb on + strand at 4485.942 kb on + strand at 4485.942 kb on + strand at 4485.943 kb on - strand at 4485.943 kb on - strand at 4485.943 kb on - strand at 4485.943 kb on - strand at 4485.943 kb on - strand at 4485.943 kb on - strand at 4485.943 kb on - strand at 4485.943 kb on - strand at 4486.020 kb on + strand, within QEN71_RS20155 at 4486.020 kb on + strand, within QEN71_RS20155 at 4486.020 kb on + strand, within QEN71_RS20155 at 4486.020 kb on + strand, within QEN71_RS20155 at 4486.020 kb on + strand, within QEN71_RS20155 at 4486.020 kb on + strand, within QEN71_RS20155 at 4486.020 kb on + strand, within QEN71_RS20155 at 4486.020 kb on + strand, within QEN71_RS20155 at 4486.021 kb on - strand, within QEN71_RS20155 at 4486.021 kb on - strand, within QEN71_RS20155 at 4486.021 kb on - strand, within QEN71_RS20155 at 4486.021 kb on - strand, within QEN71_RS20155 at 4486.021 kb on - strand, within QEN71_RS20155 at 4486.021 kb on - strand, within QEN71_RS20155 at 4486.021 kb on - strand, within QEN71_RS20155 at 4486.021 kb on - strand, within QEN71_RS20155 at 4486.021 kb on - strand, within QEN71_RS20155 at 4486.021 kb on - strand, within QEN71_RS20155 at 4486.021 kb on - strand, within QEN71_RS20155 at 4486.298 kb on + strand at 4486.298 kb on + strand at 4486.298 kb on + strand at 4486.298 kb on + strand at 4486.298 kb on + strand at 4486.298 kb on + strand at 4486.298 kb on + strand at 4486.299 kb on - strand at 4486.299 kb on - strand at 4486.299 kb on - strand at 4486.299 kb on - strand at 4486.299 kb on - strand at 4486.299 kb on - strand at 4486.299 kb on - strand at 4486.299 kb on - strand at 4486.299 kb on - strand at 4486.299 kb on - strand at 4486.299 kb on - strand at 4486.299 kb on - strand at 4486.299 kb on - strand at 4486.299 kb on - strand at 4486.299 kb on - strand at 4486.528 kb on + strand, within QEN71_RS20160 at 4486.528 kb on + strand, within QEN71_RS20160 at 4486.528 kb on + strand, within QEN71_RS20160 at 4486.528 kb on + strand, within QEN71_RS20160 at 4486.528 kb on + strand, within QEN71_RS20160 at 4486.528 kb on + strand, within QEN71_RS20160 at 4486.528 kb on + strand, within QEN71_RS20160 at 4486.528 kb on + strand, within QEN71_RS20160 at 4486.528 kb on + strand, within QEN71_RS20160 at 4486.528 kb on + strand, within QEN71_RS20160 at 4486.528 kb on + strand, within QEN71_RS20160 at 4486.528 kb on + strand, within QEN71_RS20160 at 4486.528 kb on + strand, within QEN71_RS20160 at 4486.528 kb on + strand, within QEN71_RS20160 at 4486.528 kb on + strand, within QEN71_RS20160 at 4486.529 kb on - strand, within QEN71_RS20160 at 4486.529 kb on - strand, within QEN71_RS20160 at 4486.529 kb on - strand, within QEN71_RS20160 at 4486.529 kb on - strand, within QEN71_RS20160 at 4486.529 kb on - strand, within QEN71_RS20160 at 4486.529 kb on - strand, within QEN71_RS20160 at 4486.529 kb on - strand, within QEN71_RS20160 at 4486.529 kb on - strand, within QEN71_RS20160 at 4486.531 kb on - strand, within QEN71_RS20160 at 4486.579 kb on + strand at 4486.579 kb on + strand at 4486.579 kb on + strand at 4486.579 kb on + strand at 4486.580 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-Ribose (C) remove 4,484,725 + QEN71_RS20145 0.30 +1.2 4,484,726 - QEN71_RS20145 0.30 -0.3 4,484,726 - QEN71_RS20145 0.30 +0.2 4,485,046 + QEN71_RS20145 0.66 +1.1 4,485,252 - QEN71_RS20145 0.88 +0.8 4,485,357 + +0.2 4,485,357 + +0.6 4,485,357 + -0.5 4,485,357 + -0.5 4,485,358 - -0.3 4,485,358 - +0.3 4,485,368 + -1.0 4,485,368 + -0.2 4,485,368 + -0.1 4,485,368 + -1.7 4,485,368 + -0.4 4,485,368 + -0.6 4,485,368 + +0.6 4,485,369 - -1.3 4,485,369 - -0.8 4,485,369 - -0.9 4,485,425 + +0.0 4,485,425 + -0.3 4,485,425 + +0.3 4,485,425 + -1.3 4,485,426 - +0.6 4,485,426 - -0.3 4,485,426 - -0.5 4,485,426 - +0.2 4,485,426 - -0.6 4,485,518 - QEN71_RS20150 0.23 -1.1 4,485,550 + QEN71_RS20150 0.35 -0.4 4,485,550 + QEN71_RS20150 0.35 -0.4 4,485,550 + QEN71_RS20150 0.35 -0.2 4,485,550 + QEN71_RS20150 0.35 -1.2 4,485,550 + QEN71_RS20150 0.35 +0.2 4,485,550 + QEN71_RS20150 0.35 -0.0 4,485,550 + QEN71_RS20150 0.35 +0.0 4,485,550 + QEN71_RS20150 0.35 +0.3 4,485,550 + QEN71_RS20150 0.35 -0.9 4,485,551 - QEN71_RS20150 0.36 -0.3 4,485,551 - QEN71_RS20150 0.36 -0.2 4,485,551 - QEN71_RS20150 0.36 -0.2 4,485,551 - QEN71_RS20150 0.36 -0.4 4,485,559 + QEN71_RS20150 0.39 +1.2 4,485,559 + QEN71_RS20150 0.39 -0.1 4,485,559 + QEN71_RS20150 0.39 -0.1 4,485,559 + QEN71_RS20150 0.39 -1.1 4,485,559 + QEN71_RS20150 0.39 -0.4 4,485,560 - QEN71_RS20150 0.39 -0.4 4,485,560 - QEN71_RS20150 0.39 -0.3 4,485,560 - QEN71_RS20150 0.39 +0.6 4,485,560 - QEN71_RS20150 0.39 -0.4 4,485,560 - QEN71_RS20150 0.39 +0.1 4,485,734 - +0.4 4,485,796 + -1.2 4,485,796 + +0.1 4,485,796 + -0.4 4,485,797 - +0.6 4,485,808 - -1.3 4,485,820 + +0.2 4,485,820 + -2.0 4,485,820 + -0.2 4,485,820 + -0.5 4,485,820 + -1.0 4,485,820 + -0.8 4,485,820 + +0.9 4,485,820 + -0.6 4,485,820 + +0.9 4,485,821 - -1.0 4,485,821 - -0.2 4,485,821 - -0.2 4,485,821 - -0.5 4,485,821 - +0.5 4,485,821 - -2.2 4,485,821 - -1.4 4,485,821 - +1.4 4,485,821 - -0.1 4,485,821 - -0.5 4,485,821 - -1.3 4,485,821 - -0.4 4,485,924 - +0.1 4,485,942 + -0.2 4,485,942 + -0.3 4,485,942 + -0.4 4,485,942 + -0.2 4,485,942 + +0.3 4,485,943 - -2.3 4,485,943 - +1.7 4,485,943 - -0.7 4,485,943 - -0.4 4,485,943 - -0.8 4,485,943 - -1.4 4,485,943 - -1.0 4,485,943 - -0.0 4,486,020 + QEN71_RS20155 0.29 -0.4 4,486,020 + QEN71_RS20155 0.29 -0.5 4,486,020 + QEN71_RS20155 0.29 -0.8 4,486,020 + QEN71_RS20155 0.29 -0.3 4,486,020 + QEN71_RS20155 0.29 -0.4 4,486,020 + QEN71_RS20155 0.29 -0.2 4,486,020 + QEN71_RS20155 0.29 -1.0 4,486,020 + QEN71_RS20155 0.29 -0.0 4,486,021 - QEN71_RS20155 0.30 +0.1 4,486,021 - QEN71_RS20155 0.30 -1.4 4,486,021 - QEN71_RS20155 0.30 +0.9 4,486,021 - QEN71_RS20155 0.30 -1.2 4,486,021 - QEN71_RS20155 0.30 -0.4 4,486,021 - QEN71_RS20155 0.30 -0.8 4,486,021 - QEN71_RS20155 0.30 -0.2 4,486,021 - QEN71_RS20155 0.30 -1.2 4,486,021 - QEN71_RS20155 0.30 -0.4 4,486,021 - QEN71_RS20155 0.30 +0.1 4,486,021 - QEN71_RS20155 0.30 -0.7 4,486,298 + -1.2 4,486,298 + -0.8 4,486,298 + +0.9 4,486,298 + +0.9 4,486,298 + +0.5 4,486,298 + -0.2 4,486,298 + -0.5 4,486,299 - -2.8 4,486,299 - -0.4 4,486,299 - +0.8 4,486,299 - -2.6 4,486,299 - +0.7 4,486,299 - -0.3 4,486,299 - -1.0 4,486,299 - -0.5 4,486,299 - +0.0 4,486,299 - -0.1 4,486,299 - -1.6 4,486,299 - -0.2 4,486,299 - +0.2 4,486,299 - -1.5 4,486,299 - -0.2 4,486,528 + QEN71_RS20160 0.87 +0.1 4,486,528 + QEN71_RS20160 0.87 -1.1 4,486,528 + QEN71_RS20160 0.87 -0.6 4,486,528 + QEN71_RS20160 0.87 -0.5 4,486,528 + QEN71_RS20160 0.87 +0.4 4,486,528 + QEN71_RS20160 0.87 -1.1 4,486,528 + QEN71_RS20160 0.87 -0.5 4,486,528 + QEN71_RS20160 0.87 -0.2 4,486,528 + QEN71_RS20160 0.87 +0.4 4,486,528 + QEN71_RS20160 0.87 -1.2 4,486,528 + QEN71_RS20160 0.87 -0.0 4,486,528 + QEN71_RS20160 0.87 -1.0 4,486,528 + QEN71_RS20160 0.87 -0.9 4,486,528 + QEN71_RS20160 0.87 -1.6 4,486,528 + QEN71_RS20160 0.87 -0.7 4,486,529 - QEN71_RS20160 0.87 -1.1 4,486,529 - QEN71_RS20160 0.87 +0.2 4,486,529 - QEN71_RS20160 0.87 +1.2 4,486,529 - QEN71_RS20160 0.87 +0.3 4,486,529 - QEN71_RS20160 0.87 -0.1 4,486,529 - QEN71_RS20160 0.87 -0.9 4,486,529 - QEN71_RS20160 0.87 +0.9 4,486,529 - QEN71_RS20160 0.87 -0.6 4,486,531 - QEN71_RS20160 0.88 +0.1 4,486,579 + -0.4 4,486,579 + -0.4 4,486,579 + -0.0 4,486,579 + -1.3 4,486,580 - +1.1
Or see this region's nucleotide sequence