Experiment: 2-Deoxy-D-Ribose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS19085 and QEN71_RS19090 are separated by 682 nucleotides QEN71_RS19090 and QEN71_RS19095 are separated by 30 nucleotides QEN71_RS19095 and QEN71_RS19100 overlap by 4 nucleotides
QEN71_RS19085: QEN71_RS19085 - alpha/beta hydrolase, at 4,244,371 to 4,245,204
_RS19085
QEN71_RS19090: QEN71_RS19090 - IS66 family transposase, at 4,245,887 to 4,247,473
_RS19090
QEN71_RS19095: QEN71_RS19095 - IS66 family insertion sequence element accessory protein TnpB, at 4,247,504 to 4,247,848
_RS19095
QEN71_RS19100: QEN71_RS19100 - transposase, at 4,247,845 to 4,248,327
_RS19100
Position (kb)
4245
4246
4247
4248 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4244.999 kb on + strand, within QEN71_RS19085 at 4245.000 kb on - strand, within QEN71_RS19085 at 4245.030 kb on + strand, within QEN71_RS19085 at 4245.031 kb on - strand, within QEN71_RS19085 at 4245.116 kb on + strand, within QEN71_RS19085 at 4245.117 kb on - strand, within QEN71_RS19085 at 4245.121 kb on + strand at 4245.121 kb on + strand at 4245.121 kb on + strand at 4245.122 kb on - strand at 4245.122 kb on - strand at 4245.122 kb on - strand at 4245.142 kb on + strand at 4245.142 kb on + strand at 4245.143 kb on - strand at 4245.182 kb on - strand at 4245.233 kb on - strand at 4245.271 kb on + strand at 4245.314 kb on + strand at 4245.314 kb on + strand at 4245.315 kb on - strand at 4245.356 kb on + strand at 4245.356 kb on + strand at 4245.356 kb on + strand at 4245.383 kb on + strand at 4245.398 kb on + strand at 4245.399 kb on - strand at 4245.399 kb on - strand at 4245.507 kb on + strand at 4245.507 kb on + strand at 4245.679 kb on + strand at 4248.353 kb on + strand at 4248.353 kb on + strand at 4248.353 kb on + strand at 4248.353 kb on + strand at 4248.353 kb on + strand at 4248.353 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-Ribose (C) remove 4,244,999 + QEN71_RS19085 0.75 +0.5 4,245,000 - QEN71_RS19085 0.75 +0.3 4,245,030 + QEN71_RS19085 0.79 -1.0 4,245,031 - QEN71_RS19085 0.79 -0.6 4,245,116 + QEN71_RS19085 0.89 -1.2 4,245,117 - QEN71_RS19085 0.89 +0.5 4,245,121 + -0.6 4,245,121 + +0.5 4,245,121 + -0.1 4,245,122 - -0.7 4,245,122 - -1.8 4,245,122 - +0.4 4,245,142 + -0.7 4,245,142 + -0.1 4,245,143 - +0.4 4,245,182 - -0.5 4,245,233 - -0.5 4,245,271 + +0.1 4,245,314 + -0.7 4,245,314 + -0.1 4,245,315 - -0.2 4,245,356 + -0.5 4,245,356 + +0.4 4,245,356 + +0.3 4,245,383 + +0.2 4,245,398 + -0.0 4,245,399 - -0.5 4,245,399 - -0.8 4,245,507 + +2.3 4,245,507 + +0.6 4,245,679 + +0.1 4,248,353 + -0.8 4,248,353 + -0.8 4,248,353 + +0.1 4,248,353 + -1.4 4,248,353 + +0.0 4,248,353 + -2.5
Or see this region's nucleotide sequence