Experiment: 2-Deoxy-D-Ribose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS18840 and QEN71_RS18845 are separated by 401 nucleotides QEN71_RS18845 and QEN71_RS18850 are separated by 48 nucleotides QEN71_RS18850 and QEN71_RS18855 are separated by 110 nucleotides
QEN71_RS18840: QEN71_RS18840 - hypothetical protein, at 4,194,845 to 4,195,369
_RS18840
QEN71_RS18845: QEN71_RS18845 - hypothetical protein, at 4,195,771 to 4,196,001
_RS18845
QEN71_RS18850: QEN71_RS18850 - hemerythrin domain-containing protein, at 4,196,050 to 4,196,622
_RS18850
QEN71_RS18855: QEN71_RS18855 - FdhF/YdeP family oxidoreductase, at 4,196,733 to 4,199,012
_RS18855
Position (kb)
4196
4197 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4195.243 kb on - strand, within QEN71_RS18840 at 4195.344 kb on + strand at 4195.530 kb on - strand at 4195.595 kb on + strand at 4195.664 kb on + strand at 4195.665 kb on - strand at 4195.769 kb on + strand at 4195.878 kb on + strand, within QEN71_RS18845 at 4195.879 kb on - strand, within QEN71_RS18845 at 4195.947 kb on - strand, within QEN71_RS18845 at 4195.947 kb on - strand, within QEN71_RS18845 at 4195.971 kb on + strand, within QEN71_RS18845 at 4195.971 kb on + strand, within QEN71_RS18845 at 4196.230 kb on + strand, within QEN71_RS18850 at 4196.612 kb on - strand at 4196.612 kb on - strand at 4196.735 kb on - strand at 4196.735 kb on - strand at 4196.808 kb on + strand at 4196.809 kb on - strand at 4196.838 kb on - strand at 4196.857 kb on + strand at 4197.025 kb on + strand, within QEN71_RS18855 at 4197.278 kb on - strand, within QEN71_RS18855 at 4197.492 kb on + strand, within QEN71_RS18855 at 4197.493 kb on - strand, within QEN71_RS18855 at 4197.496 kb on + strand, within QEN71_RS18855 at 4197.496 kb on + strand, within QEN71_RS18855
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-Ribose (C) remove 4,195,243 - QEN71_RS18840 0.76 -0.2 4,195,344 + +1.9 4,195,530 - -0.5 4,195,595 + -0.3 4,195,664 + -1.4 4,195,665 - +1.2 4,195,769 + +0.0 4,195,878 + QEN71_RS18845 0.46 -0.1 4,195,879 - QEN71_RS18845 0.47 -0.9 4,195,947 - QEN71_RS18845 0.76 +0.6 4,195,947 - QEN71_RS18845 0.76 -0.7 4,195,971 + QEN71_RS18845 0.87 +0.5 4,195,971 + QEN71_RS18845 0.87 -1.9 4,196,230 + QEN71_RS18850 0.31 -1.2 4,196,612 - +0.3 4,196,612 - +0.0 4,196,735 - +1.5 4,196,735 - +0.7 4,196,808 + -0.8 4,196,809 - +0.6 4,196,838 - +0.6 4,196,857 + -1.7 4,197,025 + QEN71_RS18855 0.13 -0.4 4,197,278 - QEN71_RS18855 0.24 -0.4 4,197,492 + QEN71_RS18855 0.33 +0.7 4,197,493 - QEN71_RS18855 0.33 -0.1 4,197,496 + QEN71_RS18855 0.33 -2.1 4,197,496 + QEN71_RS18855 0.33 -0.3
Or see this region's nucleotide sequence