Experiment: 2-Deoxy-D-Ribose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS12575 and QEN71_RS12580 are separated by 341 nucleotides QEN71_RS12580 and QEN71_RS12585 are separated by 6 nucleotides
QEN71_RS12575: QEN71_RS12575 - glycine betaine/L-proline ABC transporter ATP-binding protein, at 2,813,187 to 2,814,491
_RS12575
QEN71_RS12580: QEN71_RS12580 - IlvD/Edd family dehydratase, at 2,814,833 to 2,816,545
_RS12580
QEN71_RS12585: QEN71_RS12585 - dihydrodipicolinate synthase family protein, at 2,816,552 to 2,817,484
_RS12585
Position (kb)
2814
2815
2816
2817 Strain fitness (log2 ratio)
-2
-1
0
1 at 2814.323 kb on + strand, within QEN71_RS12575 at 2814.324 kb on - strand, within QEN71_RS12575 at 2814.324 kb on - strand, within QEN71_RS12575 at 2814.327 kb on + strand, within QEN71_RS12575 at 2814.328 kb on - strand, within QEN71_RS12575 at 2814.328 kb on - strand, within QEN71_RS12575 at 2814.339 kb on + strand, within QEN71_RS12575 at 2814.340 kb on - strand, within QEN71_RS12575 at 2814.340 kb on - strand, within QEN71_RS12575 at 2814.411 kb on + strand at 2814.411 kb on + strand at 2814.412 kb on - strand at 2814.442 kb on + strand at 2814.751 kb on + strand at 2814.752 kb on - strand at 2814.756 kb on + strand at 2814.778 kb on + strand at 2814.778 kb on + strand at 2814.778 kb on + strand at 2814.779 kb on - strand at 2814.779 kb on - strand at 2814.964 kb on + strand at 2814.964 kb on + strand at 2814.964 kb on + strand at 2814.965 kb on - strand at 2814.965 kb on - strand at 2814.965 kb on - strand at 2815.016 kb on + strand, within QEN71_RS12580 at 2815.017 kb on - strand, within QEN71_RS12580 at 2815.585 kb on + strand, within QEN71_RS12580 at 2815.761 kb on - strand, within QEN71_RS12580 at 2815.782 kb on - strand, within QEN71_RS12580 at 2815.881 kb on + strand, within QEN71_RS12580 at 2815.881 kb on + strand, within QEN71_RS12580 at 2815.881 kb on + strand, within QEN71_RS12580 at 2815.881 kb on + strand, within QEN71_RS12580 at 2815.882 kb on - strand, within QEN71_RS12580 at 2816.258 kb on + strand, within QEN71_RS12580 at 2816.466 kb on + strand at 2816.467 kb on - strand at 2816.690 kb on - strand, within QEN71_RS12585 at 2816.847 kb on - strand, within QEN71_RS12585 at 2816.919 kb on - strand, within QEN71_RS12585 at 2817.097 kb on - strand, within QEN71_RS12585 at 2817.288 kb on + strand, within QEN71_RS12585 at 2817.289 kb on - strand, within QEN71_RS12585
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-Ribose (C) remove 2,814,323 + QEN71_RS12575 0.87 -0.1 2,814,324 - QEN71_RS12575 0.87 +1.0 2,814,324 - QEN71_RS12575 0.87 +0.4 2,814,327 + QEN71_RS12575 0.87 -0.4 2,814,328 - QEN71_RS12575 0.87 +0.0 2,814,328 - QEN71_RS12575 0.87 +0.4 2,814,339 + QEN71_RS12575 0.88 -0.5 2,814,340 - QEN71_RS12575 0.88 -0.8 2,814,340 - QEN71_RS12575 0.88 +0.6 2,814,411 + -0.5 2,814,411 + -0.2 2,814,412 - -0.5 2,814,442 + +0.6 2,814,751 + -0.1 2,814,752 - -0.8 2,814,756 + +0.1 2,814,778 + +0.6 2,814,778 + -0.0 2,814,778 + -1.1 2,814,779 - -1.9 2,814,779 - -1.9 2,814,964 + +0.1 2,814,964 + -1.5 2,814,964 + -0.6 2,814,965 - -0.5 2,814,965 - -1.0 2,814,965 - +0.4 2,815,016 + QEN71_RS12580 0.11 -1.0 2,815,017 - QEN71_RS12580 0.11 -0.3 2,815,585 + QEN71_RS12580 0.44 +0.3 2,815,761 - QEN71_RS12580 0.54 +0.5 2,815,782 - QEN71_RS12580 0.55 -0.9 2,815,881 + QEN71_RS12580 0.61 +0.4 2,815,881 + QEN71_RS12580 0.61 -1.4 2,815,881 + QEN71_RS12580 0.61 -0.2 2,815,881 + QEN71_RS12580 0.61 -0.6 2,815,882 - QEN71_RS12580 0.61 -0.2 2,816,258 + QEN71_RS12580 0.83 +0.1 2,816,466 + -1.4 2,816,467 - -2.0 2,816,690 - QEN71_RS12585 0.15 -0.9 2,816,847 - QEN71_RS12585 0.32 -0.6 2,816,919 - QEN71_RS12585 0.39 -1.0 2,817,097 - QEN71_RS12585 0.58 -0.9 2,817,288 + QEN71_RS12585 0.79 -0.0 2,817,289 - QEN71_RS12585 0.79 -0.9
Or see this region's nucleotide sequence