Experiment: 2-Deoxy-D-Ribose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS10325 and QEN71_RS10330 overlap by 4 nucleotides QEN71_RS10330 and QEN71_RS10335 are separated by 10 nucleotides QEN71_RS10335 and QEN71_RS10340 overlap by 4 nucleotides QEN71_RS10340 and QEN71_RS10345 overlap by 4 nucleotides QEN71_RS10345 and QEN71_RS10350 are separated by 239 nucleotides
QEN71_RS10325: QEN71_RS10325 - hypothetical protein, at 2,295,028 to 2,295,555
_RS10325
QEN71_RS10330: QEN71_RS10330 - hypothetical protein, at 2,295,552 to 2,295,722
_RS10330
QEN71_RS10335: QEN71_RS10335 - hypothetical protein, at 2,295,733 to 2,296,311
_RS10335
QEN71_RS10340: QEN71_RS10340 - hypothetical protein, at 2,296,308 to 2,296,679
_RS10340
QEN71_RS10345: QEN71_RS10345 - hypothetical protein, at 2,296,676 to 2,296,954
_RS10345
QEN71_RS10350: QEN71_RS10350 - hypothetical protein, at 2,297,194 to 2,297,427
_RS10350
Position (kb)
2296
2297 Strain fitness (log2 ratio)
-2
-1
0
1 at 2295.591 kb on - strand, within QEN71_RS10330 at 2295.665 kb on - strand, within QEN71_RS10330 at 2295.734 kb on + strand at 2295.865 kb on - strand, within QEN71_RS10335 at 2295.885 kb on + strand, within QEN71_RS10335 at 2296.002 kb on - strand, within QEN71_RS10335 at 2296.089 kb on - strand, within QEN71_RS10335 at 2296.119 kb on - strand, within QEN71_RS10335 at 2296.226 kb on + strand, within QEN71_RS10335 at 2296.373 kb on + strand, within QEN71_RS10340 at 2296.409 kb on - strand, within QEN71_RS10340 at 2296.459 kb on + strand, within QEN71_RS10340 at 2296.460 kb on - strand, within QEN71_RS10340 at 2296.558 kb on + strand, within QEN71_RS10340 at 2296.562 kb on + strand, within QEN71_RS10340 at 2296.838 kb on - strand, within QEN71_RS10345 at 2296.838 kb on - strand, within QEN71_RS10345 at 2296.947 kb on - strand at 2297.010 kb on - strand at 2297.087 kb on - strand at 2297.088 kb on + strand at 2297.098 kb on + strand at 2297.099 kb on - strand at 2297.127 kb on + strand at 2297.159 kb on + strand at 2297.467 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-Ribose (C) remove 2,295,591 - QEN71_RS10330 0.23 +0.5 2,295,665 - QEN71_RS10330 0.66 -1.9 2,295,734 + +0.0 2,295,865 - QEN71_RS10335 0.23 +0.3 2,295,885 + QEN71_RS10335 0.26 -0.1 2,296,002 - QEN71_RS10335 0.46 -0.2 2,296,089 - QEN71_RS10335 0.61 +0.7 2,296,119 - QEN71_RS10335 0.67 +0.1 2,296,226 + QEN71_RS10335 0.85 +0.2 2,296,373 + QEN71_RS10340 0.17 -1.9 2,296,409 - QEN71_RS10340 0.27 +0.2 2,296,459 + QEN71_RS10340 0.41 +0.1 2,296,460 - QEN71_RS10340 0.41 -0.2 2,296,558 + QEN71_RS10340 0.67 -0.5 2,296,562 + QEN71_RS10340 0.68 -0.1 2,296,838 - QEN71_RS10345 0.58 -1.0 2,296,838 - QEN71_RS10345 0.58 -0.7 2,296,947 - -0.9 2,297,010 - +0.5 2,297,087 - +1.2 2,297,088 + -0.0 2,297,098 + +0.9 2,297,099 - +0.6 2,297,127 + -0.0 2,297,159 + -0.5 2,297,467 - -1.1
Or see this region's nucleotide sequence