Experiment: 2-Deoxy-D-Ribose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS10190 and QEN71_RS10195 overlap by 8 nucleotides QEN71_RS10195 and QEN71_RS10200 overlap by 1 nucleotides QEN71_RS10200 and QEN71_RS10205 overlap by 14 nucleotides
QEN71_RS10190: QEN71_RS10190 - carbohydrate ABC transporter permease, at 2,271,831 to 2,272,643
_RS10190
QEN71_RS10195: QEN71_RS10195 - sugar ABC transporter permease, at 2,272,636 to 2,273,529
_RS10195
QEN71_RS10200: QEN71_RS10200 - ABC transporter ATP-binding protein, at 2,273,529 to 2,274,638
_RS10200
QEN71_RS10205: QEN71_RS10205 - ABC transporter ATP-binding protein, at 2,274,625 to 2,275,737
_RS10205
Position (kb)
2273
2274
2275 Strain fitness (log2 ratio)
-1
0
1 at 2272.597 kb on + strand at 2272.608 kb on + strand at 2272.698 kb on - strand at 2272.796 kb on + strand, within QEN71_RS10195 at 2272.934 kb on + strand, within QEN71_RS10195 at 2272.983 kb on - strand, within QEN71_RS10195 at 2273.016 kb on - strand, within QEN71_RS10195 at 2273.099 kb on + strand, within QEN71_RS10195 at 2273.099 kb on + strand, within QEN71_RS10195 at 2273.106 kb on - strand, within QEN71_RS10195 at 2273.185 kb on + strand, within QEN71_RS10195 at 2273.185 kb on + strand, within QEN71_RS10195 at 2273.429 kb on + strand, within QEN71_RS10195 at 2273.482 kb on + strand at 2273.640 kb on - strand, within QEN71_RS10200 at 2273.699 kb on + strand, within QEN71_RS10200 at 2273.700 kb on - strand, within QEN71_RS10200 at 2273.700 kb on - strand, within QEN71_RS10200 at 2273.700 kb on - strand, within QEN71_RS10200 at 2274.052 kb on + strand, within QEN71_RS10200 at 2274.052 kb on + strand, within QEN71_RS10200 at 2274.053 kb on - strand, within QEN71_RS10200 at 2274.053 kb on - strand, within QEN71_RS10200 at 2274.361 kb on + strand, within QEN71_RS10200 at 2274.572 kb on - strand at 2274.601 kb on + strand at 2274.639 kb on - strand at 2274.716 kb on + strand at 2274.717 kb on - strand at 2274.717 kb on - strand at 2274.809 kb on + strand, within QEN71_RS10205 at 2274.810 kb on - strand, within QEN71_RS10205 at 2274.905 kb on - strand, within QEN71_RS10205 at 2275.076 kb on + strand, within QEN71_RS10205 at 2275.176 kb on - strand, within QEN71_RS10205 at 2275.481 kb on + strand, within QEN71_RS10205 at 2275.499 kb on + strand, within QEN71_RS10205 at 2275.500 kb on - strand, within QEN71_RS10205 at 2275.500 kb on - strand, within QEN71_RS10205
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-Ribose (C) remove 2,272,597 + -1.0 2,272,608 + -0.1 2,272,698 - +0.0 2,272,796 + QEN71_RS10195 0.18 +0.1 2,272,934 + QEN71_RS10195 0.33 +0.2 2,272,983 - QEN71_RS10195 0.39 -1.1 2,273,016 - QEN71_RS10195 0.43 +0.5 2,273,099 + QEN71_RS10195 0.52 +0.6 2,273,099 + QEN71_RS10195 0.52 +0.3 2,273,106 - QEN71_RS10195 0.53 -0.2 2,273,185 + QEN71_RS10195 0.61 +0.0 2,273,185 + QEN71_RS10195 0.61 +0.5 2,273,429 + QEN71_RS10195 0.89 -0.5 2,273,482 + +0.5 2,273,640 - QEN71_RS10200 0.10 -0.3 2,273,699 + QEN71_RS10200 0.15 -0.5 2,273,700 - QEN71_RS10200 0.15 -0.7 2,273,700 - QEN71_RS10200 0.15 -0.3 2,273,700 - QEN71_RS10200 0.15 -0.1 2,274,052 + QEN71_RS10200 0.47 -1.0 2,274,052 + QEN71_RS10200 0.47 -1.3 2,274,053 - QEN71_RS10200 0.47 -1.0 2,274,053 - QEN71_RS10200 0.47 -0.2 2,274,361 + QEN71_RS10200 0.75 -0.1 2,274,572 - -0.2 2,274,601 + -0.8 2,274,639 - +0.0 2,274,716 + -0.3 2,274,717 - -0.1 2,274,717 - -0.2 2,274,809 + QEN71_RS10205 0.17 +0.2 2,274,810 - QEN71_RS10205 0.17 +0.1 2,274,905 - QEN71_RS10205 0.25 -0.9 2,275,076 + QEN71_RS10205 0.41 +0.3 2,275,176 - QEN71_RS10205 0.50 -0.7 2,275,481 + QEN71_RS10205 0.77 -0.0 2,275,499 + QEN71_RS10205 0.79 +0.0 2,275,500 - QEN71_RS10205 0.79 -0.0 2,275,500 - QEN71_RS10205 0.79 -0.1
Or see this region's nucleotide sequence