Experiment: 2-Deoxy-D-Ribose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS09550 and QEN71_RS09555 are separated by 26 nucleotides QEN71_RS09555 and QEN71_RS09560 are separated by 252 nucleotides QEN71_RS09560 and QEN71_RS09565 are separated by 291 nucleotides
QEN71_RS09550: QEN71_RS09550 - family 1 encapsulin nanocompartment shell protein, at 2,136,682 to 2,137,485
_RS09550
QEN71_RS09555: QEN71_RS09555 - TetR/AcrR family transcriptional regulator, at 2,137,512 to 2,138,093
_RS09555
QEN71_RS09560: QEN71_RS09560 - antibiotic biosynthesis monooxygenase, at 2,138,346 to 2,138,696
_RS09560
QEN71_RS09565: QEN71_RS09565 - alpha/beta hydrolase, at 2,138,988 to 2,139,851
_RS09565
Position (kb)
2138
2139 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2137.483 kb on + strand at 2137.484 kb on - strand at 2137.960 kb on + strand, within QEN71_RS09555 at 2137.960 kb on + strand, within QEN71_RS09555 at 2138.124 kb on - strand at 2138.357 kb on + strand at 2138.357 kb on + strand at 2138.469 kb on + strand, within QEN71_RS09560 at 2138.550 kb on + strand, within QEN71_RS09560 at 2138.580 kb on + strand, within QEN71_RS09560 at 2138.945 kb on + strand at 2138.945 kb on + strand at 2139.039 kb on + strand at 2139.205 kb on - strand, within QEN71_RS09565 at 2139.273 kb on - strand, within QEN71_RS09565 at 2139.437 kb on + strand, within QEN71_RS09565 at 2139.437 kb on + strand, within QEN71_RS09565 at 2139.438 kb on - strand, within QEN71_RS09565 at 2139.481 kb on - strand, within QEN71_RS09565 at 2139.607 kb on - strand, within QEN71_RS09565
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-Ribose (C) remove 2,137,483 + -0.3 2,137,484 - +0.7 2,137,960 + QEN71_RS09555 0.77 +2.0 2,137,960 + QEN71_RS09555 0.77 -0.5 2,138,124 - -0.8 2,138,357 + -0.2 2,138,357 + +0.2 2,138,469 + QEN71_RS09560 0.35 +0.8 2,138,550 + QEN71_RS09560 0.58 -0.7 2,138,580 + QEN71_RS09560 0.67 -1.6 2,138,945 + -0.4 2,138,945 + -1.9 2,139,039 + +1.1 2,139,205 - QEN71_RS09565 0.25 -0.4 2,139,273 - QEN71_RS09565 0.33 +0.7 2,139,437 + QEN71_RS09565 0.52 -0.3 2,139,437 + QEN71_RS09565 0.52 -0.0 2,139,438 - QEN71_RS09565 0.52 +0.9 2,139,481 - QEN71_RS09565 0.57 -0.2 2,139,607 - QEN71_RS09565 0.72 -0.1
Or see this region's nucleotide sequence