Experiment: 2-Deoxy-D-Ribose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS08745 and QEN71_RS08750 overlap by 13 nucleotides QEN71_RS08750 and QEN71_RS08755 are separated by 0 nucleotides QEN71_RS08755 and QEN71_RS08760 overlap by 8 nucleotides
QEN71_RS08745: QEN71_RS08745 - precorrin-3B C(17)-methyltransferase, at 1,964,950 to 1,966,677
_RS08745
QEN71_RS08750: QEN71_RS08750 - precorrin-2 C(20)-methyltransferase, at 1,966,665 to 1,967,420
_RS08750
QEN71_RS08755: QEN71_RS08755 - precorrin-8X methylmutase, at 1,967,421 to 1,968,047
_RS08755
QEN71_RS08760: QEN71_RS08760 - precorrin-3B synthase, at 1,968,040 to 1,969,401
_RS08760
Position (kb) 1967
1968
1969 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 1966.499 kb on + strand, within QEN71_RS08745 at 1966.499 kb on + strand, within QEN71_RS08745 at 1966.500 kb on - strand, within QEN71_RS08745 at 1966.532 kb on + strand at 1966.642 kb on + strand at 1966.643 kb on - strand at 1966.708 kb on + strand at 1966.708 kb on + strand at 1966.780 kb on + strand, within QEN71_RS08750 at 1966.780 kb on + strand, within QEN71_RS08750 at 1966.780 kb on + strand, within QEN71_RS08750 at 1966.780 kb on + strand, within QEN71_RS08750 at 1966.780 kb on + strand, within QEN71_RS08750 at 1966.780 kb on + strand, within QEN71_RS08750 at 1966.781 kb on - strand, within QEN71_RS08750 at 1966.781 kb on - strand, within QEN71_RS08750 at 1966.781 kb on - strand, within QEN71_RS08750 at 1966.781 kb on - strand, within QEN71_RS08750 at 1966.781 kb on - strand, within QEN71_RS08750 at 1966.781 kb on - strand, within QEN71_RS08750 at 1966.781 kb on - strand, within QEN71_RS08750 at 1966.943 kb on - strand, within QEN71_RS08750 at 1966.943 kb on - strand, within QEN71_RS08750 at 1966.943 kb on - strand, within QEN71_RS08750 at 1967.053 kb on + strand, within QEN71_RS08750 at 1967.053 kb on + strand, within QEN71_RS08750 at 1967.053 kb on + strand, within QEN71_RS08750 at 1967.053 kb on + strand, within QEN71_RS08750 at 1967.053 kb on + strand, within QEN71_RS08750 at 1967.053 kb on + strand, within QEN71_RS08750 at 1967.053 kb on + strand, within QEN71_RS08750 at 1967.053 kb on + strand, within QEN71_RS08750 at 1967.053 kb on + strand, within QEN71_RS08750 at 1967.053 kb on + strand, within QEN71_RS08750 at 1967.053 kb on + strand, within QEN71_RS08750 at 1967.054 kb on - strand, within QEN71_RS08750 at 1967.054 kb on - strand, within QEN71_RS08750 at 1967.054 kb on - strand, within QEN71_RS08750 at 1967.054 kb on - strand, within QEN71_RS08750 at 1967.054 kb on - strand, within QEN71_RS08750 at 1967.054 kb on - strand, within QEN71_RS08750 at 1967.059 kb on + strand, within QEN71_RS08750 at 1967.059 kb on + strand, within QEN71_RS08750 at 1967.059 kb on + strand, within QEN71_RS08750 at 1967.059 kb on + strand, within QEN71_RS08750 at 1967.059 kb on + strand, within QEN71_RS08750 at 1967.059 kb on + strand, within QEN71_RS08750 at 1967.059 kb on + strand, within QEN71_RS08750 at 1967.060 kb on - strand, within QEN71_RS08750 at 1967.060 kb on - strand, within QEN71_RS08750 at 1967.060 kb on - strand, within QEN71_RS08750 at 1967.060 kb on - strand, within QEN71_RS08750 at 1967.060 kb on - strand, within QEN71_RS08750 at 1967.060 kb on - strand, within QEN71_RS08750 at 1967.060 kb on - strand, within QEN71_RS08750 at 1967.060 kb on - strand, within QEN71_RS08750 at 1967.060 kb on - strand, within QEN71_RS08750 at 1967.060 kb on - strand, within QEN71_RS08750 at 1967.060 kb on - strand, within QEN71_RS08750 at 1967.060 kb on - strand, within QEN71_RS08750 at 1967.060 kb on - strand, within QEN71_RS08750 at 1967.060 kb on - strand, within QEN71_RS08750 at 1967.060 kb on - strand, within QEN71_RS08750 at 1967.068 kb on + strand, within QEN71_RS08750 at 1967.068 kb on + strand, within QEN71_RS08750 at 1967.069 kb on - strand, within QEN71_RS08750 at 1967.152 kb on + strand, within QEN71_RS08750 at 1967.152 kb on + strand, within QEN71_RS08750 at 1967.152 kb on + strand, within QEN71_RS08750 at 1967.152 kb on + strand, within QEN71_RS08750 at 1967.152 kb on + strand, within QEN71_RS08750 at 1967.152 kb on + strand, within QEN71_RS08750 at 1967.153 kb on - strand, within QEN71_RS08750 at 1967.176 kb on + strand, within QEN71_RS08750 at 1967.215 kb on + strand, within QEN71_RS08750 at 1967.302 kb on + strand, within QEN71_RS08750 at 1967.302 kb on + strand, within QEN71_RS08750 at 1967.302 kb on + strand, within QEN71_RS08750 at 1967.302 kb on + strand, within QEN71_RS08750 at 1967.303 kb on - strand, within QEN71_RS08750 at 1967.303 kb on - strand, within QEN71_RS08750 at 1967.303 kb on - strand, within QEN71_RS08750 at 1967.386 kb on + strand at 1967.422 kb on + strand at 1967.422 kb on + strand at 1967.423 kb on - strand at 1967.423 kb on - strand at 1967.423 kb on - strand at 1968.037 kb on + strand at 1968.037 kb on + strand at 1968.037 kb on + strand at 1968.037 kb on + strand at 1968.037 kb on + strand at 1968.037 kb on + strand at 1968.037 kb on + strand at 1968.038 kb on - strand at 1968.170 kb on + strand at 1968.170 kb on + strand at 1968.171 kb on - strand at 1968.171 kb on - strand at 1968.209 kb on + strand, within QEN71_RS08760 at 1968.210 kb on - strand, within QEN71_RS08760 at 1968.210 kb on - strand, within QEN71_RS08760 at 1968.210 kb on - strand, within QEN71_RS08760 at 1968.210 kb on - strand, within QEN71_RS08760 at 1968.299 kb on - strand, within QEN71_RS08760 at 1968.361 kb on + strand, within QEN71_RS08760 at 1968.658 kb on + strand, within QEN71_RS08760 at 1968.659 kb on - strand, within QEN71_RS08760 at 1968.659 kb on - strand, within QEN71_RS08760 at 1968.659 kb on - strand, within QEN71_RS08760 at 1968.659 kb on - strand, within QEN71_RS08760 at 1968.682 kb on + strand, within QEN71_RS08760 at 1968.682 kb on + strand, within QEN71_RS08760 at 1968.682 kb on + strand, within QEN71_RS08760 at 1968.682 kb on + strand, within QEN71_RS08760 at 1968.683 kb on - strand, within QEN71_RS08760 at 1968.683 kb on - strand, within QEN71_RS08760 at 1968.683 kb on - strand, within QEN71_RS08760 at 1968.683 kb on - strand, within QEN71_RS08760 at 1968.718 kb on - strand, within QEN71_RS08760 at 1968.806 kb on - strand, within QEN71_RS08760 at 1968.806 kb on - strand, within QEN71_RS08760 at 1968.893 kb on + strand, within QEN71_RS08760 at 1968.893 kb on + strand, within QEN71_RS08760 at 1968.893 kb on + strand, within QEN71_RS08760 at 1968.894 kb on - strand, within QEN71_RS08760 at 1968.894 kb on - strand, within QEN71_RS08760 at 1968.894 kb on - strand, within QEN71_RS08760 at 1968.896 kb on - strand, within QEN71_RS08760
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-Ribose (C) remove 1,966,499 + QEN71_RS08745 0.90 -1.2 1,966,499 + QEN71_RS08745 0.90 -0.4 1,966,500 - QEN71_RS08745 0.90 -0.2 1,966,532 + -0.6 1,966,642 + +1.2 1,966,643 - -0.2 1,966,708 + -0.3 1,966,708 + +0.0 1,966,780 + QEN71_RS08750 0.15 +0.4 1,966,780 + QEN71_RS08750 0.15 -0.5 1,966,780 + QEN71_RS08750 0.15 -0.9 1,966,780 + QEN71_RS08750 0.15 -1.0 1,966,780 + QEN71_RS08750 0.15 +0.3 1,966,780 + QEN71_RS08750 0.15 -0.6 1,966,781 - QEN71_RS08750 0.15 +0.3 1,966,781 - QEN71_RS08750 0.15 -1.2 1,966,781 - QEN71_RS08750 0.15 -0.7 1,966,781 - QEN71_RS08750 0.15 -0.1 1,966,781 - QEN71_RS08750 0.15 -0.0 1,966,781 - QEN71_RS08750 0.15 +0.6 1,966,781 - QEN71_RS08750 0.15 +0.9 1,966,943 - QEN71_RS08750 0.37 -2.2 1,966,943 - QEN71_RS08750 0.37 +0.6 1,966,943 - QEN71_RS08750 0.37 +0.2 1,967,053 + QEN71_RS08750 0.51 -0.2 1,967,053 + QEN71_RS08750 0.51 -0.4 1,967,053 + QEN71_RS08750 0.51 -1.8 1,967,053 + QEN71_RS08750 0.51 +0.1 1,967,053 + QEN71_RS08750 0.51 +0.2 1,967,053 + QEN71_RS08750 0.51 -0.1 1,967,053 + QEN71_RS08750 0.51 -0.1 1,967,053 + QEN71_RS08750 0.51 -1.3 1,967,053 + QEN71_RS08750 0.51 +1.1 1,967,053 + QEN71_RS08750 0.51 +0.3 1,967,053 + QEN71_RS08750 0.51 -0.4 1,967,054 - QEN71_RS08750 0.51 -0.1 1,967,054 - QEN71_RS08750 0.51 -0.4 1,967,054 - QEN71_RS08750 0.51 +0.6 1,967,054 - QEN71_RS08750 0.51 -0.9 1,967,054 - QEN71_RS08750 0.51 -0.6 1,967,054 - QEN71_RS08750 0.51 -0.7 1,967,059 + QEN71_RS08750 0.52 -0.0 1,967,059 + QEN71_RS08750 0.52 -0.8 1,967,059 + QEN71_RS08750 0.52 +0.7 1,967,059 + QEN71_RS08750 0.52 +0.4 1,967,059 + QEN71_RS08750 0.52 -0.3 1,967,059 + QEN71_RS08750 0.52 -0.5 1,967,059 + QEN71_RS08750 0.52 +1.1 1,967,060 - QEN71_RS08750 0.52 +0.3 1,967,060 - QEN71_RS08750 0.52 -0.6 1,967,060 - QEN71_RS08750 0.52 +0.5 1,967,060 - QEN71_RS08750 0.52 -0.2 1,967,060 - QEN71_RS08750 0.52 +0.2 1,967,060 - QEN71_RS08750 0.52 +0.1 1,967,060 - QEN71_RS08750 0.52 +0.5 1,967,060 - QEN71_RS08750 0.52 +0.7 1,967,060 - QEN71_RS08750 0.52 -0.1 1,967,060 - QEN71_RS08750 0.52 +0.2 1,967,060 - QEN71_RS08750 0.52 -0.0 1,967,060 - QEN71_RS08750 0.52 +0.2 1,967,060 - QEN71_RS08750 0.52 +0.8 1,967,060 - QEN71_RS08750 0.52 -0.2 1,967,060 - QEN71_RS08750 0.52 +0.3 1,967,068 + QEN71_RS08750 0.53 +0.3 1,967,068 + QEN71_RS08750 0.53 -0.4 1,967,069 - QEN71_RS08750 0.53 +0.2 1,967,152 + QEN71_RS08750 0.64 -0.4 1,967,152 + QEN71_RS08750 0.64 -2.0 1,967,152 + QEN71_RS08750 0.64 -1.5 1,967,152 + QEN71_RS08750 0.64 +0.3 1,967,152 + QEN71_RS08750 0.64 -0.6 1,967,152 + QEN71_RS08750 0.64 -0.5 1,967,153 - QEN71_RS08750 0.65 -0.1 1,967,176 + QEN71_RS08750 0.68 -1.3 1,967,215 + QEN71_RS08750 0.73 -0.7 1,967,302 + QEN71_RS08750 0.84 -0.4 1,967,302 + QEN71_RS08750 0.84 -0.7 1,967,302 + QEN71_RS08750 0.84 +0.5 1,967,302 + QEN71_RS08750 0.84 +0.4 1,967,303 - QEN71_RS08750 0.84 +1.6 1,967,303 - QEN71_RS08750 0.84 +0.0 1,967,303 - QEN71_RS08750 0.84 -0.6 1,967,386 + -0.7 1,967,422 + -1.1 1,967,422 + -0.4 1,967,423 - -0.5 1,967,423 - -1.1 1,967,423 - +0.6 1,968,037 + +0.4 1,968,037 + +0.2 1,968,037 + +0.2 1,968,037 + +0.1 1,968,037 + -0.1 1,968,037 + +0.6 1,968,037 + -0.1 1,968,038 - -0.4 1,968,170 + -1.5 1,968,170 + +0.9 1,968,171 - -1.9 1,968,171 - -2.8 1,968,209 + QEN71_RS08760 0.12 -0.4 1,968,210 - QEN71_RS08760 0.12 +0.3 1,968,210 - QEN71_RS08760 0.12 -0.4 1,968,210 - QEN71_RS08760 0.12 -1.3 1,968,210 - QEN71_RS08760 0.12 -1.0 1,968,299 - QEN71_RS08760 0.19 -2.5 1,968,361 + QEN71_RS08760 0.24 -0.2 1,968,658 + QEN71_RS08760 0.45 -3.0 1,968,659 - QEN71_RS08760 0.45 +0.1 1,968,659 - QEN71_RS08760 0.45 -0.1 1,968,659 - QEN71_RS08760 0.45 -1.3 1,968,659 - QEN71_RS08760 0.45 -3.1 1,968,682 + QEN71_RS08760 0.47 -0.5 1,968,682 + QEN71_RS08760 0.47 -0.6 1,968,682 + QEN71_RS08760 0.47 -0.1 1,968,682 + QEN71_RS08760 0.47 -0.7 1,968,683 - QEN71_RS08760 0.47 -0.9 1,968,683 - QEN71_RS08760 0.47 -1.0 1,968,683 - QEN71_RS08760 0.47 -2.2 1,968,683 - QEN71_RS08760 0.47 -1.8 1,968,718 - QEN71_RS08760 0.50 +0.2 1,968,806 - QEN71_RS08760 0.56 -0.4 1,968,806 - QEN71_RS08760 0.56 -1.3 1,968,893 + QEN71_RS08760 0.63 -0.8 1,968,893 + QEN71_RS08760 0.63 +0.2 1,968,893 + QEN71_RS08760 0.63 -1.1 1,968,894 - QEN71_RS08760 0.63 -1.4 1,968,894 - QEN71_RS08760 0.63 -0.8 1,968,894 - QEN71_RS08760 0.63 -0.7 1,968,896 - QEN71_RS08760 0.63 -1.1
Or see this region's nucleotide sequence