Experiment: 2-Deoxy-D-Ribose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS05770 and QEN71_RS05775 are separated by 103 nucleotides QEN71_RS05775 and QEN71_RS05780 are separated by 110 nucleotides QEN71_RS05780 and QEN71_RS05785 are separated by 69 nucleotides
QEN71_RS05770: QEN71_RS05770 - hypothetical protein, at 1,282,577 to 1,282,813
_RS05770
QEN71_RS05775: QEN71_RS05775 - low molecular weight protein-tyrosine-phosphatase, at 1,282,917 to 1,283,444
_RS05775
QEN71_RS05780: QEN71_RS05780 - Fe-S cluster assembly transcriptional regulator IscR, at 1,283,555 to 1,284,079
_RS05780
QEN71_RS05785: QEN71_RS05785 - IscS subfamily cysteine desulfurase, at 1,284,149 to 1,285,372
_RS05785
Position (kb)
1283
1284
1285 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1282.591 kb on - strand at 1282.598 kb on + strand at 1282.598 kb on + strand at 1282.598 kb on + strand at 1282.598 kb on + strand at 1282.598 kb on + strand at 1282.598 kb on + strand at 1282.598 kb on + strand at 1282.598 kb on + strand at 1282.599 kb on - strand at 1282.599 kb on - strand at 1282.599 kb on - strand at 1282.599 kb on - strand at 1282.599 kb on - strand at 1282.599 kb on - strand at 1282.640 kb on + strand, within QEN71_RS05770 at 1282.640 kb on + strand, within QEN71_RS05770 at 1282.640 kb on + strand, within QEN71_RS05770 at 1282.640 kb on + strand, within QEN71_RS05770 at 1282.641 kb on - strand, within QEN71_RS05770 at 1282.641 kb on - strand, within QEN71_RS05770 at 1282.641 kb on - strand, within QEN71_RS05770 at 1282.641 kb on - strand, within QEN71_RS05770 at 1282.652 kb on + strand, within QEN71_RS05770 at 1282.652 kb on + strand, within QEN71_RS05770 at 1282.652 kb on + strand, within QEN71_RS05770 at 1282.652 kb on + strand, within QEN71_RS05770 at 1282.652 kb on + strand, within QEN71_RS05770 at 1282.653 kb on - strand, within QEN71_RS05770 at 1282.653 kb on - strand, within QEN71_RS05770 at 1282.653 kb on - strand, within QEN71_RS05770 at 1282.653 kb on - strand, within QEN71_RS05770 at 1282.653 kb on - strand, within QEN71_RS05770 at 1282.653 kb on - strand, within QEN71_RS05770 at 1282.653 kb on - strand, within QEN71_RS05770 at 1282.653 kb on - strand, within QEN71_RS05770 at 1282.733 kb on + strand, within QEN71_RS05770 at 1282.734 kb on - strand, within QEN71_RS05770 at 1282.734 kb on - strand, within QEN71_RS05770 at 1282.811 kb on + strand at 1282.811 kb on + strand at 1282.811 kb on + strand at 1282.812 kb on - strand at 1282.812 kb on - strand at 1282.812 kb on - strand at 1282.812 kb on - strand at 1282.812 kb on - strand at 1282.812 kb on - strand at 1282.812 kb on - strand at 1282.858 kb on + strand at 1282.858 kb on + strand at 1282.858 kb on + strand at 1282.858 kb on + strand at 1282.859 kb on - strand at 1282.859 kb on - strand at 1282.859 kb on - strand at 1282.859 kb on - strand at 1282.859 kb on - strand at 1282.859 kb on - strand at 1282.859 kb on - strand at 1282.859 kb on - strand at 1282.859 kb on - strand at 1282.859 kb on - strand at 1282.859 kb on - strand at 1282.860 kb on + strand at 1282.861 kb on - strand at 1282.861 kb on - strand at 1282.861 kb on - strand at 1282.861 kb on - strand at 1282.884 kb on + strand at 1282.884 kb on + strand at 1282.884 kb on + strand at 1282.884 kb on + strand at 1282.884 kb on + strand at 1282.884 kb on + strand at 1282.884 kb on + strand at 1282.884 kb on + strand at 1282.884 kb on + strand at 1282.884 kb on + strand at 1282.884 kb on + strand at 1282.884 kb on + strand at 1282.884 kb on + strand at 1282.884 kb on + strand at 1282.884 kb on + strand at 1282.884 kb on + strand at 1282.885 kb on - strand at 1282.885 kb on - strand at 1282.885 kb on - strand at 1282.885 kb on - strand at 1282.885 kb on - strand at 1282.885 kb on - strand at 1282.885 kb on - strand at 1283.112 kb on + strand, within QEN71_RS05775 at 1283.125 kb on + strand, within QEN71_RS05775 at 1283.125 kb on + strand, within QEN71_RS05775 at 1283.125 kb on + strand, within QEN71_RS05775 at 1283.125 kb on + strand, within QEN71_RS05775 at 1283.126 kb on - strand, within QEN71_RS05775 at 1283.126 kb on - strand, within QEN71_RS05775 at 1283.346 kb on + strand, within QEN71_RS05775 at 1283.346 kb on + strand, within QEN71_RS05775 at 1283.346 kb on + strand, within QEN71_RS05775 at 1283.346 kb on + strand, within QEN71_RS05775 at 1283.346 kb on + strand, within QEN71_RS05775 at 1283.346 kb on + strand, within QEN71_RS05775 at 1283.347 kb on - strand, within QEN71_RS05775 at 1283.347 kb on - strand, within QEN71_RS05775 at 1283.347 kb on - strand, within QEN71_RS05775 at 1283.442 kb on + strand at 1283.442 kb on + strand at 1283.442 kb on + strand at 1283.443 kb on - strand at 1283.443 kb on - strand at 1283.443 kb on - strand at 1283.443 kb on - strand at 1283.443 kb on - strand at 1283.443 kb on - strand at 1283.458 kb on + strand at 1283.459 kb on - strand at 1283.462 kb on + strand at 1283.462 kb on + strand at 1283.462 kb on + strand at 1283.462 kb on + strand at 1283.462 kb on + strand at 1283.462 kb on + strand at 1283.462 kb on + strand at 1283.463 kb on - strand at 1283.463 kb on - strand at 1283.463 kb on - strand at 1283.463 kb on - strand at 1283.463 kb on - strand at 1283.482 kb on - strand at 1283.487 kb on + strand at 1283.488 kb on - strand at 1283.512 kb on + strand at 1283.512 kb on + strand at 1283.512 kb on + strand at 1283.513 kb on - strand at 1283.513 kb on - strand at 1283.514 kb on + strand at 1283.554 kb on + strand at 1283.554 kb on + strand at 1283.554 kb on + strand at 1283.554 kb on + strand at 1283.554 kb on + strand at 1283.554 kb on + strand at 1283.554 kb on + strand at 1283.554 kb on + strand at 1283.554 kb on + strand at 1283.554 kb on + strand at 1283.554 kb on + strand at 1283.554 kb on + strand at 1283.554 kb on + strand at 1283.554 kb on + strand at 1283.554 kb on + strand at 1283.554 kb on + strand at 1283.554 kb on + strand at 1283.554 kb on + strand at 1283.554 kb on + strand at 1283.554 kb on + strand at 1283.554 kb on + strand at 1283.554 kb on + strand at 1283.554 kb on + strand at 1283.554 kb on + strand at 1283.554 kb on + strand at 1283.554 kb on + strand at 1283.554 kb on + strand at 1283.554 kb on + strand at 1283.554 kb on + strand at 1283.554 kb on + strand at 1283.554 kb on + strand at 1283.554 kb on + strand at 1283.554 kb on + strand at 1283.554 kb on + strand at 1283.554 kb on + strand at 1283.747 kb on + strand, within QEN71_RS05780 at 1283.747 kb on + strand, within QEN71_RS05780 at 1284.121 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-Ribose (C) remove 1,282,591 - +0.3 1,282,598 + -1.3 1,282,598 + +0.2 1,282,598 + +0.6 1,282,598 + -0.5 1,282,598 + -0.0 1,282,598 + +0.5 1,282,598 + -0.4 1,282,598 + +0.3 1,282,599 - -0.0 1,282,599 - -1.0 1,282,599 - -0.4 1,282,599 - +0.0 1,282,599 - -0.9 1,282,599 - -0.2 1,282,640 + QEN71_RS05770 0.27 +1.4 1,282,640 + QEN71_RS05770 0.27 +2.0 1,282,640 + QEN71_RS05770 0.27 -0.0 1,282,640 + QEN71_RS05770 0.27 -1.1 1,282,641 - QEN71_RS05770 0.27 +0.7 1,282,641 - QEN71_RS05770 0.27 -0.0 1,282,641 - QEN71_RS05770 0.27 -0.0 1,282,641 - QEN71_RS05770 0.27 -0.2 1,282,652 + QEN71_RS05770 0.32 -0.2 1,282,652 + QEN71_RS05770 0.32 +1.5 1,282,652 + QEN71_RS05770 0.32 -0.0 1,282,652 + QEN71_RS05770 0.32 -2.1 1,282,652 + QEN71_RS05770 0.32 -0.5 1,282,653 - QEN71_RS05770 0.32 -0.4 1,282,653 - QEN71_RS05770 0.32 -0.6 1,282,653 - QEN71_RS05770 0.32 +0.9 1,282,653 - QEN71_RS05770 0.32 -0.2 1,282,653 - QEN71_RS05770 0.32 +0.6 1,282,653 - QEN71_RS05770 0.32 +1.7 1,282,653 - QEN71_RS05770 0.32 +0.0 1,282,653 - QEN71_RS05770 0.32 -0.8 1,282,733 + QEN71_RS05770 0.66 -1.1 1,282,734 - QEN71_RS05770 0.66 -0.0 1,282,734 - QEN71_RS05770 0.66 -0.1 1,282,811 + -0.2 1,282,811 + -1.2 1,282,811 + +0.5 1,282,812 - -0.4 1,282,812 - +0.5 1,282,812 - -0.5 1,282,812 - -1.4 1,282,812 - +1.1 1,282,812 - -0.5 1,282,812 - -0.5 1,282,858 + +0.8 1,282,858 + -0.0 1,282,858 + -0.9 1,282,858 + +0.7 1,282,859 - +0.8 1,282,859 - -0.2 1,282,859 - +0.1 1,282,859 - -0.4 1,282,859 - +1.1 1,282,859 - -0.4 1,282,859 - -0.2 1,282,859 - -0.2 1,282,859 - -0.7 1,282,859 - +0.2 1,282,859 - -0.3 1,282,860 + -1.7 1,282,861 - +1.2 1,282,861 - -0.6 1,282,861 - -0.5 1,282,861 - +0.4 1,282,884 + +0.3 1,282,884 + -0.4 1,282,884 + -0.3 1,282,884 + -0.9 1,282,884 + -0.6 1,282,884 + -0.0 1,282,884 + -0.3 1,282,884 + +1.0 1,282,884 + +2.1 1,282,884 + -2.4 1,282,884 + -0.1 1,282,884 + +0.2 1,282,884 + -0.5 1,282,884 + +0.8 1,282,884 + +0.6 1,282,884 + +0.4 1,282,885 - -2.5 1,282,885 - -0.4 1,282,885 - +0.1 1,282,885 - +0.5 1,282,885 - -0.2 1,282,885 - +1.5 1,282,885 - +0.4 1,283,112 + QEN71_RS05775 0.37 +1.0 1,283,125 + QEN71_RS05775 0.39 -0.6 1,283,125 + QEN71_RS05775 0.39 +0.7 1,283,125 + QEN71_RS05775 0.39 -1.2 1,283,125 + QEN71_RS05775 0.39 +0.2 1,283,126 - QEN71_RS05775 0.40 -0.4 1,283,126 - QEN71_RS05775 0.40 +0.1 1,283,346 + QEN71_RS05775 0.81 -1.6 1,283,346 + QEN71_RS05775 0.81 +2.6 1,283,346 + QEN71_RS05775 0.81 +0.6 1,283,346 + QEN71_RS05775 0.81 -0.4 1,283,346 + QEN71_RS05775 0.81 -0.2 1,283,346 + QEN71_RS05775 0.81 -1.4 1,283,347 - QEN71_RS05775 0.81 -1.3 1,283,347 - QEN71_RS05775 0.81 +0.4 1,283,347 - QEN71_RS05775 0.81 -0.5 1,283,442 + +0.2 1,283,442 + -1.5 1,283,442 + -0.6 1,283,443 - -0.0 1,283,443 - -0.6 1,283,443 - +0.3 1,283,443 - -0.8 1,283,443 - +0.2 1,283,443 - -0.5 1,283,458 + -1.0 1,283,459 - +0.7 1,283,462 + -0.6 1,283,462 + +2.2 1,283,462 + -0.3 1,283,462 + -0.8 1,283,462 + -1.1 1,283,462 + -2.7 1,283,462 + -0.7 1,283,463 - -0.6 1,283,463 - +1.1 1,283,463 - +0.6 1,283,463 - -0.8 1,283,463 - +0.1 1,283,482 - -1.2 1,283,487 + +0.6 1,283,488 - -0.2 1,283,512 + +0.5 1,283,512 + -0.0 1,283,512 + -0.3 1,283,513 - -1.4 1,283,513 - +1.5 1,283,514 + -0.4 1,283,554 + +0.2 1,283,554 + -0.3 1,283,554 + -0.7 1,283,554 + -0.9 1,283,554 + +0.7 1,283,554 + -0.2 1,283,554 + +0.6 1,283,554 + -1.0 1,283,554 + -0.7 1,283,554 + -0.4 1,283,554 + +0.1 1,283,554 + +0.5 1,283,554 + -0.2 1,283,554 + +0.1 1,283,554 + -1.6 1,283,554 + +0.2 1,283,554 + +1.0 1,283,554 + -0.4 1,283,554 + +0.9 1,283,554 + -0.4 1,283,554 + -1.8 1,283,554 + -1.2 1,283,554 + +0.1 1,283,554 + -0.0 1,283,554 + +0.5 1,283,554 + -0.7 1,283,554 + +0.8 1,283,554 + -0.4 1,283,554 + -0.0 1,283,554 + -0.0 1,283,554 + -0.0 1,283,554 + +0.5 1,283,554 + +1.3 1,283,554 + -0.2 1,283,554 + -1.4 1,283,747 + QEN71_RS05780 0.37 -3.2 1,283,747 + QEN71_RS05780 0.37 -1.6 1,284,121 + +0.4
Or see this region's nucleotide sequence