Experiment: 2-Deoxy-D-Ribose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS00530 and QEN71_RS00535 overlap by 11 nucleotides QEN71_RS00535 and QEN71_RS00540 are separated by 299 nucleotides
QEN71_RS00530: QEN71_RS00530 - ABC transporter permease, at 114,019 to 115,020
_RS00530
QEN71_RS00535: QEN71_RS00535 - sugar ABC transporter ATP-binding protein, at 115,010 to 116,587
_RS00535
QEN71_RS00540: QEN71_RS00540 - ABC transporter substrate-binding protein, at 116,887 to 117,891
_RS00540
Position (kb)
115
116
117 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 114.041 kb on + strand at 114.041 kb on + strand at 114.041 kb on + strand at 114.041 kb on + strand at 114.042 kb on - strand at 114.117 kb on - strand at 114.162 kb on + strand, within QEN71_RS00530 at 114.162 kb on + strand, within QEN71_RS00530 at 114.162 kb on + strand, within QEN71_RS00530 at 114.164 kb on + strand, within QEN71_RS00530 at 114.164 kb on + strand, within QEN71_RS00530 at 114.164 kb on + strand, within QEN71_RS00530 at 114.164 kb on + strand, within QEN71_RS00530 at 114.164 kb on + strand, within QEN71_RS00530 at 114.164 kb on + strand, within QEN71_RS00530 at 114.164 kb on + strand, within QEN71_RS00530 at 114.164 kb on + strand, within QEN71_RS00530 at 114.164 kb on + strand, within QEN71_RS00530 at 114.164 kb on + strand, within QEN71_RS00530 at 114.164 kb on + strand, within QEN71_RS00530 at 114.164 kb on + strand, within QEN71_RS00530 at 114.164 kb on + strand, within QEN71_RS00530 at 114.165 kb on - strand, within QEN71_RS00530 at 114.165 kb on - strand, within QEN71_RS00530 at 114.165 kb on - strand, within QEN71_RS00530 at 114.165 kb on - strand, within QEN71_RS00530 at 114.165 kb on - strand, within QEN71_RS00530 at 114.165 kb on - strand, within QEN71_RS00530 at 114.165 kb on - strand, within QEN71_RS00530 at 114.317 kb on + strand, within QEN71_RS00530 at 114.318 kb on - strand, within QEN71_RS00530 at 114.318 kb on - strand, within QEN71_RS00530 at 114.318 kb on - strand, within QEN71_RS00530 at 114.359 kb on + strand, within QEN71_RS00530 at 114.395 kb on + strand, within QEN71_RS00530 at 114.395 kb on + strand, within QEN71_RS00530 at 114.396 kb on - strand, within QEN71_RS00530 at 114.396 kb on - strand, within QEN71_RS00530 at 114.846 kb on + strand, within QEN71_RS00530 at 114.996 kb on + strand at 114.996 kb on + strand at 114.996 kb on + strand at 114.996 kb on + strand at 114.996 kb on + strand at 114.996 kb on + strand at 115.110 kb on + strand at 115.111 kb on - strand at 115.376 kb on + strand, within QEN71_RS00535 at 115.376 kb on + strand, within QEN71_RS00535 at 115.376 kb on + strand, within QEN71_RS00535 at 115.376 kb on + strand, within QEN71_RS00535 at 115.376 kb on + strand, within QEN71_RS00535 at 115.376 kb on + strand, within QEN71_RS00535 at 115.376 kb on + strand, within QEN71_RS00535 at 115.593 kb on + strand, within QEN71_RS00535 at 115.593 kb on + strand, within QEN71_RS00535 at 115.593 kb on + strand, within QEN71_RS00535 at 115.594 kb on - strand, within QEN71_RS00535 at 115.594 kb on - strand, within QEN71_RS00535 at 115.594 kb on - strand, within QEN71_RS00535 at 115.594 kb on - strand, within QEN71_RS00535 at 115.594 kb on - strand, within QEN71_RS00535 at 115.995 kb on + strand, within QEN71_RS00535 at 115.995 kb on + strand, within QEN71_RS00535 at 115.995 kb on + strand, within QEN71_RS00535 at 115.995 kb on + strand, within QEN71_RS00535 at 115.995 kb on + strand, within QEN71_RS00535 at 115.995 kb on + strand, within QEN71_RS00535 at 115.995 kb on + strand, within QEN71_RS00535 at 115.995 kb on + strand, within QEN71_RS00535 at 115.996 kb on - strand, within QEN71_RS00535 at 115.996 kb on - strand, within QEN71_RS00535 at 116.184 kb on + strand, within QEN71_RS00535 at 116.184 kb on + strand, within QEN71_RS00535 at 116.185 kb on - strand, within QEN71_RS00535 at 116.185 kb on - strand, within QEN71_RS00535 at 116.185 kb on - strand, within QEN71_RS00535 at 116.185 kb on - strand, within QEN71_RS00535 at 116.185 kb on - strand, within QEN71_RS00535 at 116.352 kb on + strand, within QEN71_RS00535 at 116.352 kb on + strand, within QEN71_RS00535 at 116.352 kb on + strand, within QEN71_RS00535 at 116.352 kb on + strand, within QEN71_RS00535 at 116.352 kb on + strand, within QEN71_RS00535 at 116.352 kb on + strand, within QEN71_RS00535 at 116.353 kb on - strand, within QEN71_RS00535 at 116.353 kb on - strand, within QEN71_RS00535 at 116.353 kb on - strand, within QEN71_RS00535 at 116.353 kb on - strand, within QEN71_RS00535 at 116.627 kb on + strand at 116.627 kb on + strand at 116.627 kb on + strand at 116.628 kb on - strand at 116.628 kb on - strand at 116.628 kb on - strand at 116.628 kb on - strand at 116.661 kb on + strand at 116.661 kb on + strand at 116.661 kb on + strand at 116.661 kb on + strand at 116.661 kb on + strand at 116.661 kb on + strand at 116.661 kb on + strand at 116.661 kb on + strand at 116.661 kb on + strand at 116.661 kb on + strand at 116.661 kb on + strand at 116.661 kb on + strand at 116.661 kb on + strand at 116.661 kb on + strand at 116.661 kb on + strand at 116.661 kb on + strand at 116.661 kb on + strand at 116.661 kb on + strand at 116.661 kb on + strand at 116.661 kb on + strand at 116.661 kb on + strand at 116.661 kb on + strand at 116.662 kb on - strand at 116.662 kb on - strand at 116.662 kb on - strand at 116.662 kb on - strand at 116.662 kb on - strand at 116.662 kb on - strand at 116.662 kb on - strand at 116.662 kb on - strand at 116.662 kb on - strand at 116.662 kb on - strand at 116.662 kb on - strand at 116.662 kb on - strand at 116.673 kb on + strand at 116.673 kb on + strand at 116.673 kb on + strand at 116.674 kb on - strand at 116.674 kb on - strand at 116.674 kb on - strand at 116.674 kb on - strand at 116.674 kb on - strand at 116.674 kb on - strand at 116.674 kb on - strand at 116.674 kb on - strand at 116.674 kb on - strand at 116.674 kb on - strand at 116.674 kb on - strand at 116.677 kb on + strand at 116.677 kb on + strand at 116.678 kb on - strand at 116.678 kb on - strand at 116.678 kb on - strand at 116.678 kb on - strand at 116.885 kb on - strand at 116.891 kb on + strand at 116.892 kb on - strand at 116.897 kb on + strand at 116.897 kb on + strand at 116.897 kb on + strand at 116.898 kb on - strand at 116.898 kb on - strand at 116.898 kb on - strand at 116.930 kb on + strand at 116.930 kb on + strand at 116.930 kb on + strand at 116.931 kb on - strand at 117.179 kb on + strand, within QEN71_RS00540 at 117.179 kb on + strand, within QEN71_RS00540 at 117.180 kb on - strand, within QEN71_RS00540 at 117.180 kb on - strand, within QEN71_RS00540 at 117.452 kb on + strand, within QEN71_RS00540 at 117.452 kb on + strand, within QEN71_RS00540 at 117.452 kb on + strand, within QEN71_RS00540 at 117.452 kb on + strand, within QEN71_RS00540 at 117.452 kb on + strand, within QEN71_RS00540 at 117.452 kb on + strand, within QEN71_RS00540 at 117.452 kb on + strand, within QEN71_RS00540 at 117.452 kb on + strand, within QEN71_RS00540 at 117.453 kb on - strand, within QEN71_RS00540 at 117.453 kb on - strand, within QEN71_RS00540 at 117.453 kb on - strand, within QEN71_RS00540 at 117.453 kb on - strand, within QEN71_RS00540 at 117.453 kb on - strand, within QEN71_RS00540
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-Ribose (C) remove 114,041 + -0.6 114,041 + -0.0 114,041 + -0.8 114,041 + +0.3 114,042 - -0.5 114,117 - -1.1 114,162 + QEN71_RS00530 0.14 -0.6 114,162 + QEN71_RS00530 0.14 +0.2 114,162 + QEN71_RS00530 0.14 +0.1 114,164 + QEN71_RS00530 0.14 +0.3 114,164 + QEN71_RS00530 0.14 -1.2 114,164 + QEN71_RS00530 0.14 +1.8 114,164 + QEN71_RS00530 0.14 +0.6 114,164 + QEN71_RS00530 0.14 -0.9 114,164 + QEN71_RS00530 0.14 -0.3 114,164 + QEN71_RS00530 0.14 -1.5 114,164 + QEN71_RS00530 0.14 -1.1 114,164 + QEN71_RS00530 0.14 +1.4 114,164 + QEN71_RS00530 0.14 -0.0 114,164 + QEN71_RS00530 0.14 +0.6 114,164 + QEN71_RS00530 0.14 -0.0 114,164 + QEN71_RS00530 0.14 -0.1 114,165 - QEN71_RS00530 0.15 -0.3 114,165 - QEN71_RS00530 0.15 -0.8 114,165 - QEN71_RS00530 0.15 -0.8 114,165 - QEN71_RS00530 0.15 +1.5 114,165 - QEN71_RS00530 0.15 -0.6 114,165 - QEN71_RS00530 0.15 -1.5 114,165 - QEN71_RS00530 0.15 +0.2 114,317 + QEN71_RS00530 0.30 +0.6 114,318 - QEN71_RS00530 0.30 +0.5 114,318 - QEN71_RS00530 0.30 +0.1 114,318 - QEN71_RS00530 0.30 -0.0 114,359 + QEN71_RS00530 0.34 -0.3 114,395 + QEN71_RS00530 0.38 +0.2 114,395 + QEN71_RS00530 0.38 +1.1 114,396 - QEN71_RS00530 0.38 -0.0 114,396 - QEN71_RS00530 0.38 -0.2 114,846 + QEN71_RS00530 0.83 -0.6 114,996 + -0.7 114,996 + +0.1 114,996 + +0.9 114,996 + +1.5 114,996 + +0.0 114,996 + -2.0 115,110 + -0.1 115,111 - -0.7 115,376 + QEN71_RS00535 0.23 +0.3 115,376 + QEN71_RS00535 0.23 -0.6 115,376 + QEN71_RS00535 0.23 -0.7 115,376 + QEN71_RS00535 0.23 +0.7 115,376 + QEN71_RS00535 0.23 -0.6 115,376 + QEN71_RS00535 0.23 -1.1 115,376 + QEN71_RS00535 0.23 +1.1 115,593 + QEN71_RS00535 0.37 +0.2 115,593 + QEN71_RS00535 0.37 -0.1 115,593 + QEN71_RS00535 0.37 -0.5 115,594 - QEN71_RS00535 0.37 -0.2 115,594 - QEN71_RS00535 0.37 -1.1 115,594 - QEN71_RS00535 0.37 -0.5 115,594 - QEN71_RS00535 0.37 -0.5 115,594 - QEN71_RS00535 0.37 +0.7 115,995 + QEN71_RS00535 0.62 -2.5 115,995 + QEN71_RS00535 0.62 -0.4 115,995 + QEN71_RS00535 0.62 +0.0 115,995 + QEN71_RS00535 0.62 +0.1 115,995 + QEN71_RS00535 0.62 -0.4 115,995 + QEN71_RS00535 0.62 -0.5 115,995 + QEN71_RS00535 0.62 -2.8 115,995 + QEN71_RS00535 0.62 +0.5 115,996 - QEN71_RS00535 0.62 +1.4 115,996 - QEN71_RS00535 0.62 -0.4 116,184 + QEN71_RS00535 0.74 -0.5 116,184 + QEN71_RS00535 0.74 -1.1 116,185 - QEN71_RS00535 0.74 +0.2 116,185 - QEN71_RS00535 0.74 +0.1 116,185 - QEN71_RS00535 0.74 -1.1 116,185 - QEN71_RS00535 0.74 +0.1 116,185 - QEN71_RS00535 0.74 +1.5 116,352 + QEN71_RS00535 0.85 +0.2 116,352 + QEN71_RS00535 0.85 -0.5 116,352 + QEN71_RS00535 0.85 +0.6 116,352 + QEN71_RS00535 0.85 +0.0 116,352 + QEN71_RS00535 0.85 -0.6 116,352 + QEN71_RS00535 0.85 -1.3 116,353 - QEN71_RS00535 0.85 +0.9 116,353 - QEN71_RS00535 0.85 -0.1 116,353 - QEN71_RS00535 0.85 -0.7 116,353 - QEN71_RS00535 0.85 -0.2 116,627 + -0.1 116,627 + +1.9 116,627 + -2.3 116,628 - -0.2 116,628 - -1.2 116,628 - -0.2 116,628 - +0.8 116,661 + -0.7 116,661 + -0.6 116,661 + +0.1 116,661 + +0.0 116,661 + +0.1 116,661 + -0.9 116,661 + -0.2 116,661 + -1.2 116,661 + -0.7 116,661 + +0.2 116,661 + -1.2 116,661 + -0.9 116,661 + -0.7 116,661 + +0.4 116,661 + -1.2 116,661 + -0.8 116,661 + +1.3 116,661 + +1.4 116,661 + -0.7 116,661 + +0.2 116,661 + -0.5 116,661 + -0.4 116,662 - -0.7 116,662 - -0.4 116,662 - -1.6 116,662 - +1.4 116,662 - +0.6 116,662 - -0.9 116,662 - +0.2 116,662 - +0.0 116,662 - -0.8 116,662 - -0.4 116,662 - +0.7 116,662 - +1.1 116,673 + +0.1 116,673 + -0.7 116,673 + +1.4 116,674 - -0.4 116,674 - -0.1 116,674 - -0.2 116,674 - +0.4 116,674 - +0.5 116,674 - +0.4 116,674 - -0.2 116,674 - -0.0 116,674 - -0.4 116,674 - -0.7 116,674 - +0.1 116,677 + -0.2 116,677 + +0.1 116,678 - -0.4 116,678 - -0.2 116,678 - +0.1 116,678 - -0.5 116,885 - -1.2 116,891 + +1.1 116,892 - +0.8 116,897 + -0.7 116,897 + -0.4 116,897 + -0.1 116,898 - +0.2 116,898 - -0.7 116,898 - +0.3 116,930 + -1.4 116,930 + +0.1 116,930 + +0.5 116,931 - +0.9 117,179 + QEN71_RS00540 0.29 -2.2 117,179 + QEN71_RS00540 0.29 +0.0 117,180 - QEN71_RS00540 0.29 -0.1 117,180 - QEN71_RS00540 0.29 +0.2 117,452 + QEN71_RS00540 0.56 -1.1 117,452 + QEN71_RS00540 0.56 +0.8 117,452 + QEN71_RS00540 0.56 +0.5 117,452 + QEN71_RS00540 0.56 +0.1 117,452 + QEN71_RS00540 0.56 +1.0 117,452 + QEN71_RS00540 0.56 +0.1 117,452 + QEN71_RS00540 0.56 -0.6 117,452 + QEN71_RS00540 0.56 +1.3 117,453 - QEN71_RS00540 0.56 +0.6 117,453 - QEN71_RS00540 0.56 -0.0 117,453 - QEN71_RS00540 0.56 +0.3 117,453 - QEN71_RS00540 0.56 +0.3 117,453 - QEN71_RS00540 0.56 +1.1
Or see this region's nucleotide sequence