Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_04151

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 3
15,130	-				+0.2
15,140	+				-1.7
15,140	+				+0.4
15,140	+				+0.2
15,148	-				+0.5
15,148	-				-1.4
15,148	-				-1.7
15,161	+		MIT1002_04149	0.12	-1.1
15,268	+		MIT1002_04149	0.36	+1.3
15,330	+		MIT1002_04149	0.50	-1.4
15,400	-		MIT1002_04149	0.66	-0.0
15,454	-		MIT1002_04149	0.78	+0.6
15,475	+		MIT1002_04149	0.82	-0.1
15,491	+		MIT1002_04149	0.86	+0.5
15,548	+				+0.1
15,556	-				+1.2
15,574	+				+0.6
15,591	+				-1.3
15,591	+				-1.9
15,591	+				-0.2
15,599	-				+0.1
15,675	-		MIT1002_04150	0.24	+0.7
15,701	+		MIT1002_04150	0.30	+0.2
15,711	-		MIT1002_04150	0.32	-2.7
15,711	-		MIT1002_04150	0.32	-0.0
15,723	-		MIT1002_04150	0.34	-0.3
15,726	+		MIT1002_04150	0.35	+0.1
15,726	+		MIT1002_04150	0.35	-0.5
15,726	+		MIT1002_04150	0.35	-0.8
15,726	+		MIT1002_04150	0.35	+1.4
15,726	+		MIT1002_04150	0.35	-0.1
15,726	+		MIT1002_04150	0.35	-0.0
15,734	-		MIT1002_04150	0.37	+1.0
15,767	+		MIT1002_04150	0.44	-1.5
15,772	+		MIT1002_04150	0.45	-1.2
15,780	-		MIT1002_04150	0.46	+1.1
15,836	-		MIT1002_04150	0.58	-1.6
15,881	-		MIT1002_04150	0.68	-1.7
15,881	-		MIT1002_04150	0.68	-0.1
16,001	-				-0.3
16,037	-				+0.3
16,118	-				+0.5
16,137	-				-1.4
16,183	+		MIT1002_04151	0.16	-0.4
16,215	+		MIT1002_04151	0.21	+0.2
16,242	+		MIT1002_04151	0.24	-0.1
16,242	+		MIT1002_04151	0.24	-1.7
16,242	+		MIT1002_04151	0.24	+0.7
16,250	-		MIT1002_04151	0.26	+1.2
16,250	-		MIT1002_04151	0.26	+0.4
16,250	-		MIT1002_04151	0.26	+1.2
16,330	+		MIT1002_04151	0.37	+0.7
16,330	+		MIT1002_04151	0.37	-0.9
16,335	+		MIT1002_04151	0.38	-1.4
16,338	-		MIT1002_04151	0.38	-2.1
16,354	+		MIT1002_04151	0.40	+0.5
16,398	-		MIT1002_04151	0.47	+0.7
16,398	-		MIT1002_04151	0.47	+0.3
16,453	+		MIT1002_04151	0.55	-1.1
16,454	-		MIT1002_04151	0.55	-2.7
16,465	-		MIT1002_04151	0.56	-0.5
16,533	+		MIT1002_04151	0.66	+0.7
16,722	+				+0.1
16,762	-				-1.5
16,804	+				+1.0
16,812	-				-1.3
16,812	-				+0.3
16,812	-				+0.5
16,812	-				+2.5
16,812	-				+0.4
16,813	-				-0.1
16,863	-				-1.5
16,874	+				+0.1
16,934	+				+1.1
16,957	-				+0.2
16,960	+				+1.1
17,004	+				-0.0
17,014	-				+0.9
17,014	-				-1.5
17,014	-				-0.7
17,063	-		MIT1002_04152	0.12	+1.3
17,121	+		MIT1002_04152	0.14	-1.4
17,130	+		MIT1002_04152	0.15	+0.8
17,164	-		MIT1002_04152	0.16	-0.0
17,180	+		MIT1002_04152	0.17	+1.1
17,190	+		MIT1002_04152	0.17	-0.9
17,204	+		MIT1002_04152	0.17	+0.8
17,204	+		MIT1002_04152	0.17	+1.3
17,204	+		MIT1002_04152	0.17	-1.2
17,204	+		MIT1002_04152	0.17	+0.8
17,212	-		MIT1002_04152	0.18	+0.6
17,212	-		MIT1002_04152	0.18	+0.8
17,212	-		MIT1002_04152	0.18	+0.2
17,237	+		MIT1002_04152	0.19	+1.2
17,237	+		MIT1002_04152	0.19	+0.2
17,295	+		MIT1002_04152	0.21	+0.1
17,295	+		MIT1002_04152	0.21	+0.6
17,295	+		MIT1002_04152	0.21	-0.7
17,303	-		MIT1002_04152	0.21	+0.3
17,303	-		MIT1002_04152	0.21	+2.0
17,303	-		MIT1002_04152	0.21	-0.5
17,303	-		MIT1002_04152	0.21	+0.5
17,303	-		MIT1002_04152	0.21	+0.8
17,303	-		MIT1002_04152	0.21	+0.5
17,303	-		MIT1002_04152	0.21	-0.1
17,378	-		MIT1002_04152	0.24	-0.2
17,435	+		MIT1002_04152	0.27	+2.2
17,566	+		MIT1002_04152	0.32	+0.4
17,651	+		MIT1002_04152	0.35	-1.3
17,661	+		MIT1002_04152	0.36	+0.9
17,661	+		MIT1002_04152	0.36	+0.2
17,669	-		MIT1002_04152	0.36	+1.3
17,691	-		MIT1002_04152	0.37	-0.2